RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 LAPTM5Q13571 262 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 NRF1Q16656 503 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 PYHIN1Q6K0P9 492 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 FAM183BPQ6ZVS7 135 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 OTOP1Q7RTM1 612 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 PLPPR4Q7Z2D5 763 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 FAM71AQ8IYT1 594 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 ZNF563Q8TA94 476 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 HM13Q8TCT9 377 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 EPS8L1Q8TE68 723 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 TMEM27Q9HBJ8 222 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 POLLQ9UGP5 575 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.53□□□□□ -0.882e-16■□□□□ 9.8
VEGFA-212ENST00000480614 HEBP2Q9Y5Z4 205 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 BCKDKO14874 412 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 PSMA1P25786 263 aaKnown RBP9.53□□□□□ -0.88
VEGFA-212ENST00000480614 NAGLUP54802 743 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 RASGEF1BQ0VAM2 473 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 PARP15Q460N3 678 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 WSCD1Q658N2 575 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 KIAA1324Q6UXG2 1013 aaKnown RBP9.53□□□□□ -0.88
VEGFA-212ENST00000480614 QSOX2Q6ZRP7 698 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 CST11Q9H112 138 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 TBC1D14Q9P2M4 693 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 SCN8AQ9UQD0 1980 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 ROBO3Q96MS0 1386 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 RFXANKO14593 260 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 ITGA3P26006 1051 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 INHBEP58166 350 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 DLG1Q12959 904 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 RASSF6Q6ZTQ3 369 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 HPS6Q86YV9 775 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 NEUROD4Q9HD90 331 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 AGO1Q9UL18 857 aaKnown RBP9.53□□□□□ -0.88
VEGFA-212ENST00000480614 MRPS7Q9Y2R9 242 aaKnown RBP9.53□□□□□ -0.88
VEGFA-212ENST00000480614 A0A087X0B3 334 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 RBL1P28749 1068 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 PRKCIP41743 596 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 ITGB3BPQ13352 177 aaPredicted RBP9.53□□□□□ -0.88
VEGFA-212ENST00000480614 FAM98AQ8NCA5 519 aaKnown RBP9.53□□□□□ -0.88
VEGFA-212ENST00000480614 UNKQ9C0B0 810 aaKnown RBP9.53□□□□□ -0.88
VEGFA-212ENST00000480614 TRPV5Q9NQA5 729 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.53□□□□□ -0.88
VEGFA-212ENST00000480614 TAF5Q15542 800 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 FAM189A2Q15884 450 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 VPS26BQ4G0F5 336 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 RANBP3LQ86VV4 465 aaPredicted RBP9.53□□□□□ -0.88
VEGFA-212ENST00000480614 OR2L5Q8NG80 312 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 CAPSLQ8WWF8 208 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 LINGO1Q96FE5 620 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 GAD1Q99259 594 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 SPATA9Q9BWV2 254 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 KCTD5Q9NXV2 234 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 KIAA1522Q9P206 1035 aaPredicted RBP9.53□□□□□ -0.88
VEGFA-212ENST00000480614 OGDHLQ9ULD0 1010 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 IFI35P80217 286 aaPredicted RBP9.53□□□□□ -0.88
VEGFA-212ENST00000480614 LY6KQ17RY6 165 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 SPESP1Q6UW49 350 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 ZNF662Q6ZS27 426 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 CREG2Q8IUH2 290 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 GSDMCQ9BYG8 508 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 SEC14L3Q9UDX4 400 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 DERAQ9Y315 318 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 TECPR2O15040 1411 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 DCCP43146 1447 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 CACNA1DQ01668 2161 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 G3V2T6 193 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 CYB5AP00167 134 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 ELF3P78545 371 aaPredicted RBP9.53□□□□□ -0.88
VEGFA-212ENST00000480614 EIPR1Q53HC9 387 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 GPER1Q99527 375 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 ERVW-1Q9UQF0 538 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 R3HDM2Q9Y2K5 976 aaKnown RBP9.53□□□□□ -0.88
VEGFA-212ENST00000480614 OR14I1A6ND48 311 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 PLOD3O60568 738 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 ITGA2BP08514 1039 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 DBTP11182 482 aaKnown RBP9.53□□□□□ -0.88
VEGFA-212ENST00000480614 COL6A2P12110 1019 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 ITPK1Q13572 414 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 ACVR2BQ13705 512 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 DCLRE1AQ6PJP8 1040 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 GPR180Q86V85 440 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 MYO19Q96H55 970 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 CNOT1A5YKK6 2376 aaKnown RBP9.53□□□□□ -0.88
VEGFA-212ENST00000480614 SCN2BO60939 215 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 SHMT1P34896 483 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 TMEM44Q2T9K0 475 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 CELF3Q5SZQ8 465 aaKnown RBP9.53□□□□□ -0.88
VEGFA-212ENST00000480614 MCFD2Q8NI22 146 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 C12orf66Q96MD2 445 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 ADAM2Q99965 735 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 DMTF1Q9Y222 760 aa9.53□□□□□ -0.88
VEGFA-212ENST00000480614 SLC25A14O95258 325 aaPredicted RBP9.52□□□□□ -0.88
VEGFA-212ENST00000480614 CTNNB1P35222 781 aa9.52□□□□□ -0.88
VEGFA-212ENST00000480614 ZC3H12AQ5D1E8 599 aaKnown RBP9.52□□□□□ -0.88
VEGFA-212ENST00000480614 NANOGNBQ7Z5D8 188 aa9.52□□□□□ -0.88
VEGFA-212ENST00000480614 KBTBD2Q8IY47 623 aa9.52□□□□□ -0.88
VEGFA-212ENST00000480614 CPA6Q8N4T0 437 aa9.52□□□□□ -0.88
VEGFA-212ENST00000480614 PIGXQ8TBF5 258 aa9.52□□□□□ -0.88
VEGFA-212ENST00000480614 FRMD6Q96NE9 622 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms