RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 CACNA2D4Q7Z3S7 1137 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 CEP97Q8IW35 865 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 TC2NQ8N9U0 490 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 OR6J1Q8NGC5 347 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 OR10S1Q8NGN2 331 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 OR8K5Q8NH50 307 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 GOT1L1Q8NHS2 421 aaPredicted RBP5.21□□□□□ -1.58
UPF3B-203ENST00000478840 RAB3IPQ96QF0 476 aaPredicted RBP5.21□□□□□ -1.58
UPF3B-203ENST00000478840 WDR77Q9BQA1 342 aaPredicted RBP5.21□□□□□ -1.58
UPF3B-203ENST00000478840 KRTAP4-2Q9BYR5 136 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 ST6GALNAC4Q9H4F1 302 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 OPA3Q9H6K4 179 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 WDR26Q9H7D7 661 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 PDGFCQ9NRA1 345 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 ABCF3Q9NUQ8 709 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 CISD1Q9NZ45 108 aaKnown RBP5.21□□□□□ -1.58
UPF3B-203ENST00000478840 ZNF541Q9H0D2 1346 aa5.21□□□□□ -1.58
UPF3B-203ENST00000478840 KANSL1LA0AUZ9 987 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 A6NNC1 897 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 VCYO14598 125 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 MDM4O15151 490 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 RECQL5O94762 991 aaPredicted RBP5.2□□□□□ -1.58
UPF3B-203ENST00000478840 IFNA2P01563 188 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 CHRNB2P17787 502 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 UBA1P22314 1058 aaKnown RBP5.2□□□□□ -1.58
UPF3B-203ENST00000478840 PTAFRP25105 342 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 CERS1P27544 350 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 KRT2P35908 639 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 GP5P40197 560 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 PPP3CCP48454 512 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 COMPP49747 757 aaPredicted RBP5.2□□□□□ -1.58
UPF3B-203ENST00000478840 ARSEP51690 589 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 ELLP55199 621 aaPredicted RBP5.2□□□□□ -1.58
UPF3B-203ENST00000478840 ID2Q02363 134 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 NHLH1Q02575 133 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 SPOCK1Q08629 439 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 SREBF2Q12772 1141 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 DLG2Q15700 870 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 PNLIPRP3Q17RR3 467 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 NUGGCQ68CJ6 796 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 DHRS7BQ6IAN0 325 aaPredicted RBP5.2□□□□□ -1.58
UPF3B-203ENST00000478840 METTL2BQ6P1Q9 378 aaKnown RBP5.2□□□□□ -1.58
UPF3B-203ENST00000478840 C11orf88Q6PI97 169 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 SLC2A7Q6PXP3 512 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 ZNF793Q6ZN11 406 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 PTF1AQ7RTS3 328 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 GLRX5Q86SX6 157 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 MB21D2Q8IYB1 491 aaPredicted RBP5.2□□□□□ -1.58
UPF3B-203ENST00000478840 Q8N1X5 172 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 ZBTB8BQ8NAP8 495 aaPredicted RBP5.2□□□□□ -1.58
UPF3B-203ENST00000478840 TSPAN14Q8NG11 270 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 DEPDC1BQ8WUY9 529 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 ADAMTS14Q8WXS8 1223 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 LPGAT1Q92604 370 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 PTERQ96BW5 349 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 METTL2AQ96IZ6 378 aaKnown RBP5.2□□□□□ -1.58
UPF3B-203ENST00000478840 FER1L6-AS2Q96M78 137 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 JAKMIP1Q96N16 626 aaKnown RBP5.2□□□□□ -1.58
UPF3B-203ENST00000478840 NUDCD1Q96RS6 583 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 SH3GL2Q99962 352 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 NAA11Q9BSU3 229 aaPredicted RBP5.2□□□□□ -1.58
UPF3B-203ENST00000478840 SLC25A23Q9BV35 468 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 RTN4RQ9BZR6 473 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 SEMA4CQ9C0C4 833 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 GPR88Q9GZN0 384 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 SPATC1LQ9H0A9 340 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 EPB41L5Q9HCM4 733 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 MSRB1Q9NZV6 116 aa5.2□□□□□ -1.58
UPF3B-203ENST00000478840 WIPF3A6NGB9 483 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 MAGEB17A8MXT2 336 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 ZNF814B7Z6K7 855 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 MAP2K7O14733 419 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 TLR2O60603 784 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 FZD7O75084 574 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 ICAM1P05362 532 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 CBSLP0DN79 551 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 HOXC8P31273 242 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 CBSP35520 551 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 RASSF2P50749 326 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 CSE1LP55060 971 aaKnown RBP5.19□□□□□ -1.58
UPF3B-203ENST00000478840 TMPRSS3P57727 454 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 SIRPAP78324 504 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 TMF1P82094 1093 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 COL10A1Q03692 680 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 GRIK2Q13002 908 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 LAMB3Q13751 1172 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 DAZAP2Q15038 168 aaPredicted RBP5.19□□□□□ -1.58
UPF3B-203ENST00000478840 CBWD6Q4V339 395 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 ZNF805Q5CZA5 627 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 CBWD3Q5JTY5 395 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 GGNBP1Q5YKI7 109 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 SIGIRRQ6IA17 410 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 ZNF788Q6ZQV5 615 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 DNAJB7Q7Z6W7 309 aaPredicted RBP5.19□□□□□ -1.58
UPF3B-203ENST00000478840 GGNQ86UU5 652 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 ADIPOR2Q86V24 386 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 METTL23Q86XA0 190 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 SPATA6LQ8N4H0 392 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 PIGOQ8TEQ8 1089 aa5.19□□□□□ -1.58
UPF3B-203ENST00000478840 SLC35F5Q8WV83 523 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms