RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 GPR12P47775 334 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 RRP1P56182 461 aaKnown RBP4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 CUL4AQ13619 759 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 ACVR2BQ13705 512 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 HIST2H2ACQ16777 129 aaPredicted RBP4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 WASHC2DQ5SRD0 308 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 ASPHD1Q5U4P2 390 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 NCAPH2Q6IBW4 605 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 FAM83HQ6ZRV2 1179 aaPredicted RBP4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 CTU1Q7Z7A3 348 aaKnown RBP4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 SERPINA11Q86U17 422 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 GPAT4Q86UL3 456 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 DPP10Q8N608 796 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 TMEM116Q8NCL8 245 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 C7orf57Q8NEG2 295 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 MCPH1Q8NEM0 835 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 NEUROD6Q96NK8 337 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 NUDT16L1Q9BRJ7 211 aaKnown RBP4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 ISCUQ9H1K1 167 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 PLEKHA4Q9H4M7 779 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 SIRT3Q9NTG7 399 aaPredicted RBP4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 SEPT11Q9NVA2 429 aaKnown RBP4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 HAUS2Q9NVX0 235 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 EHD2Q9NZN4 543 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 SEL1LQ9UBV2 794 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 NRBP1Q9UHY1 535 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 SLC4A4Q9Y6R1 1079 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 RGPD5Q99666 1765 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 MYOM1P52179 1685 aa4.19□□□□□ -1.74
CDC42BPA-212ENST00000478573 RGPD1P0DJD0 1748 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 DHX57Q6P158 1386 aaKnown RBP4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 A0A096LPK6 155 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 LRRC53A6NM62 1247 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 MDM4O15151 490 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 SEC31AO94979 1220 aaKnown RBP4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 TFP02787 698 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 PSMB10P40306 273 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 PBX3P40426 434 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 RFX2P48378 723 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 EGR4Q05215 589 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 KEAP1Q14145 624 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 TOMM20Q15388 145 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 DPCR1Q3MIW9 517 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 ENTPD8Q5MY95 495 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 PRAMEF19Q5SWL8 479 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 NADSYN1Q6IA69 706 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 CYP20A1Q6UW02 462 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 Q6ZTK2 550 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 IKBIPQ70UQ0 350 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 ARHGAP12Q8IWW6 846 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 CADM3Q8N126 398 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 TTC39CQ8N584 583 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 FRMD1Q8N878 549 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 CMASQ8NFW8 434 aaPredicted RBP4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 ELP5Q8TE02 316 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 SCFD2Q8WU76 684 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 ARHGEF2Q92974 986 aaKnown RBP4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 ZNF419Q96HQ0 510 aaPredicted RBP4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 SERINC2Q96SA4 455 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 SEZ6LQ9BYH1 1024 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 WDR6Q9NNW5 1121 aaKnown RBP4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 SPATS2LQ9NUQ6 558 aaKnown RBP4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 PLK2Q9NYY3 685 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 WNT16Q9UBV4 365 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 CARD8Q9Y2G2 431 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 ADAM18Q9Y3Q7 739 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 PIK3C2AO00443 1686 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 RALGAPBQ86X10 1494 aa4.18□□□□□ -1.74
CDC42BPA-212ENST00000478573 RGPD3A6NKT7 1758 aaPredicted RBP4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 RGPD4Q7Z3J3 1758 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 PNPLA6Q8IY17 1366 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 ABCC6O95255 1503 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 LMO7Q8WWI1 1683 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 DDTLA6NHG4 134 aaPredicted RBP4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 USP17L23D6RBM5 183 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 AP3D1O14617 1153 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 LIASO43766 372 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 MT-CYBP00156 380 aaPredicted RBP4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 IFNA2P01563 188 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 MMP3P08254 477 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 PCNAP12004 261 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 NFKBIAP25963 317 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 CDAP32320 146 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 PCYT1AP49585 367 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 HDAC4P56524 1084 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 CLDN2P57739 230 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 RPL36AP83881 106 aaKnown RBP4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 CREB5Q02930 508 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 GOLGA8DPQ0D2H9 430 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 CSTF3Q12996 717 aaKnown RBP4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 AIMP2Q13155 320 aaKnown RBP4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 VEPH1Q14D04 833 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 SHBQ15464 509 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 MED22Q15528 200 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 IZUMO4Q1ZYL8 232 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 SARM1Q6SZW1 724 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 PARM1Q6UWI2 310 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 TBC1D26Q86UD7 250 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 GPSM1Q86YR5 675 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 WDTC1Q8N5D0 677 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms