RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 TRIM60Q495X7 471 aa14.18□□□□□ -0.14
NPHP4-208ENST00000478423 FGD3Q5JSP0 725 aa14.18□□□□□ -0.14
NPHP4-208ENST00000478423 ATXN7L2Q5T6C5 722 aaPredicted RBP14.18□□□□□ -0.14
NPHP4-208ENST00000478423 CHST9Q7L1S5 443 aa14.18□□□□□ -0.14
NPHP4-208ENST00000478423 CAMK1DQ8IU85 385 aa14.18□□□□□ -0.14
NPHP4-208ENST00000478423 FBXW8Q8N3Y1 598 aa14.18□□□□□ -0.14
NPHP4-208ENST00000478423 FAM13CQ8NE31 585 aa14.18□□□□□ -0.14
NPHP4-208ENST00000478423 CLP1Q92989 425 aaKnown RBP14.18□□□□□ -0.14
NPHP4-208ENST00000478423 FAM83DQ9H4H8 585 aa14.18□□□□□ -0.14
NPHP4-208ENST00000478423 VRTNQ9H8Y1 702 aa14.18□□□□□ -0.14
NPHP4-208ENST00000478423 KCTD5Q9NXV2 234 aa14.18□□□□□ -0.14
NPHP4-208ENST00000478423 ADAMTS5Q9UNA0 930 aa14.18□□□□□ -0.14
NPHP4-208ENST00000478423 IRS2Q9Y4H2 1338 aa14.18□□□□□ -0.14
NPHP4-208ENST00000478423 CCDC88AQ3V6T2 1871 aa14.18□□□□□ -0.14
NPHP4-208ENST00000478423 KIF1CO43896 1103 aaKnown RBP14.18□□□□□ -0.14
NPHP4-208ENST00000478423 SIN3BO75182 1162 aa14.18□□□□□ -0.14
NPHP4-208ENST00000478423 TNFAIP8O95379 198 aa14.18□□□□□ -0.14
NPHP4-208ENST00000478423 CRATP43155 626 aa14.18□□□□□ -0.14
NPHP4-208ENST00000478423 UBE3AQ05086 875 aa14.18□□□□□ -0.14
NPHP4-208ENST00000478423 PPIGQ13427 754 aaKnown RBP eCLIP14.18□□□□□ -0.141e-6■■■□□ 16
NPHP4-208ENST00000478423 METTL21CQ5VZV1 264 aa14.18□□□□□ -0.14
NPHP4-208ENST00000478423 MAGEE2Q8TD90 523 aaPredicted RBP14.18□□□□□ -0.14
NPHP4-208ENST00000478423 TSSK3Q96PN8 268 aa14.18□□□□□ -0.14
NPHP4-208ENST00000478423 ZNF358Q9NW07 568 aa14.18□□□□□ -0.14
NPHP4-208ENST00000478423 PSME2Q9UL46 239 aa14.18□□□□□ -0.14
NPHP4-208ENST00000478423 AP3M1Q9Y2T2 418 aa14.18□□□□□ -0.14
NPHP4-208ENST00000478423 LAMB4A4D0S4 1761 aa14.18□□□□□ -0.14
NPHP4-208ENST00000478423 IGKV6D-21A0A0A0MT36 114 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 IGKV6-21A0A0C4DH24 114 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 SNTNA6NMZ2 147 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 PTGES3LE9PB15 166 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 SLC28A1O00337 649 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 MAN1A2O60476 641 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 ANXA6P08133 673 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 CYP4F8P98187 520 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 CACNG1Q06432 222 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 ADGRF1Q5T601 910 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 CLEC6AQ6EIG7 209 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 MAMDC4Q6UXC1 1216 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 ZNF513Q8N8E2 541 aaPredicted RBP14.17□□□□□ -0.14
NPHP4-208ENST00000478423 HEXDCQ8WVB3 486 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 ZFYVE19Q96K21 471 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 PEBP4Q96S96 227 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 HBEGFQ99075 208 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 PRPF19Q9UMS4 504 aaKnown RBP14.17□□□□□ -0.14
NPHP4-208ENST00000478423 ENTPD4Q9Y227 616 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 STK16O75716 305 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 SLC22A3O75751 556 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 TCEA3O75764 348 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 FGF19O95750 216 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 HLA-DQB2P05538 268 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 TNNI3P19429 210 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 ITPKAP23677 461 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 KCNQ1P51787 676 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 EIF2B5Q13144 721 aaKnown RBP14.17□□□□□ -0.14
NPHP4-208ENST00000478423 IRGCQ6NXR0 463 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 CYP20A1Q6UW02 462 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 B3GNT9Q6UX72 402 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 ZYG11AQ6WRX3 759 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 C15orf39Q6ZRI6 1047 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 GET4Q7L5D6 327 aaPredicted RBP14.17□□□□□ -0.14
NPHP4-208ENST00000478423 DHDDSQ86SQ9 333 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 COL26A1Q96A83 441 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 TCF12Q99081 682 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 GPSM3Q9Y4H4 160 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 YIPF1Q9Y548 306 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 A0A0J9YYE9 177 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 CNOT3O75175 753 aaKnown RBP14.17□□□□□ -0.14
NPHP4-208ENST00000478423 HNRNPCP07910 306 aaKnown RBP eCLIP14.17□□□□□ -0.14
NPHP4-208ENST00000478423 ANPEPP15144 967 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 HCAR3P49019 387 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 RPS7P62081 194 aaKnown RBP14.17□□□□□ -0.14
NPHP4-208ENST00000478423 GK5Q6ZS86 529 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 RAVER1Q8IY67 606 aaKnown RBP14.17□□□□□ -0.14
NPHP4-208ENST00000478423 ZNF781Q8N8C0 355 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 AP2M1Q96CW1 435 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 C19orf60Q96EN9 201 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 ZBED3Q96IU2 234 aaPredicted RBP14.17□□□□□ -0.14
NPHP4-208ENST00000478423 PANX1Q96RD7 426 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 COL2A1P02458 1487 aaPredicted RBP14.17□□□□□ -0.14
NPHP4-208ENST00000478423 C4BP0C0L5 1744 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 A0A1W2PRU2 124 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 RGS5O15539 181 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 GUCY1B2O75343 617 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 POP4O95707 220 aaKnown RBP14.17□□□□□ -0.14
NPHP4-208ENST00000478423 GNRH1P01148 92 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 HSMCR30P0CW71 290 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 PTPN2P17706 415 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 SLC1A2P43004 574 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 LPIN1Q14693 890 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 ACAP2Q15057 778 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 TPGS2Q68CL5 300 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 SLC9A4Q6AI14 798 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 AMIGO2Q86SJ2 522 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 CXorf40BQ96DE9 158 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 OR52E6Q96RD3 313 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 CLIC5Q9NZA1 410 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 PRKAG3Q9UGI9 489 aa14.17□□□□□ -0.14
NPHP4-208ENST00000478423 RPL26L1Q9UNX3 145 aaKnown RBP14.17□□□□□ -0.14
NPHP4-208ENST00000478423 MYRFQ9Y2G1 1151 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms