RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 MAP10Q9P2G4 905 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 PCSK1NQ9UHG2 260 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 ZNHIT2Q9UHR6 403 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 DACH1Q9UI36 760 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 TMEM98Q9Y2Y6 226 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 PCDHB3Q9Y5E6 796 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 PCDHGC4Q9Y5F7 938 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 PCDHGA3Q9Y5H0 932 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 MRPS18BQ9Y676 258 aaKnown RBP6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 TEX15Q9BXT5 2789 aa6.66□□□□□ -1.34
RTFDC1-206ENST00000477485 A0A0U1RQS6 177 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 CDC14CA4D256 554 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 SIGLEC16A6NMB1 481 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 WASH4PA8MWX3 477 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 TMCO5BA8MYB1 307 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 B4E171 279 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 MKRN2OSH3BPM6 223 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 POLR1CO15160 346 aaPredicted RBP6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 INPP4BO15327 924 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 VPS4BO75351 444 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 HEXIM1O94992 359 aaKnown RBP6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 FUCA1P04066 466 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 HOXC4P09017 264 aaPredicted RBP6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 PSMA2P25787 234 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 DLSTP36957 453 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 TSPAN7P41732 249 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 CSNK1DP48730 415 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 RENBPP51606 427 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 AIF1P55008 147 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 MAXP61244 160 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 AP1S1P61966 158 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 RPL7AP62424 266 aaKnown RBP6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 HHEXQ03014 270 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 ITKQ08881 620 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 ERV3-1Q14264 604 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 NR1D2Q14995 579 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 CLEC16AQ2KHT3 1053 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 DPCR1Q3MIW9 517 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 SMYD5Q6GMV2 418 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 DPY19L2P1Q6NXN4 242 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 Q6ZVL8 140 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 USP45Q70EL2 814 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 CHST15Q7LFX5 561 aaPredicted RBP6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 HSD11B1LQ7Z5J1 315 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 TSPAN33Q86UF1 283 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 RASGRP3Q8IV61 690 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 BBS5Q8N3I7 341 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 AP2M1Q96CW1 435 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 ECHDC3Q96DC8 303 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 DTD2Q96FN9 168 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 ELMO2Q96JJ3 720 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 COQ10AQ96MF6 247 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 PCDHB18PQ96TA0 734 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 CNPY3Q9BT09 278 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 TEX101Q9BY14 249 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 FRMD8Q9BZ67 464 aaPredicted RBP6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 ULBP3Q9BZM4 244 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 GANQ9H2C0 597 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 SAMSN1Q9NSI8 373 aaKnown RBP6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 CNOT8Q9UFF9 292 aaKnown RBP6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 PILRAQ9UKJ1 303 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 VPS4AQ9UN37 437 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 PRKAB1Q9Y478 270 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 TTLL3Q9Y4R7 772 aa6.65□□□□□ -1.34
RTFDC1-206ENST00000477485 ICE1Q9Y2F5 2266 aa6.65□□□□□ -1.35
RTFDC1-206ENST00000477485 SPTBN1Q01082 2364 aaKnown RBP6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 SPTAN1Q13813 2472 aaKnown RBP6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 A1L4Q6 167 aa6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 NPIPB15A6NHN6 443 aaPredicted RBP6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 TTLL8A6PVC2 850 aa6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 TRAFD1O14545 582 aaPredicted RBP6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 ATMINO43313 823 aaPredicted RBP6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 RNF8O76064 485 aa6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 IVLP07476 585 aa6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 UNGP13051 313 aaPredicted RBP6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 ERCC2P18074 760 aa6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 TNFAIP3P21580 790 aa6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 LHCGRP22888 699 aa6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 EEF1GP26641 437 aaKnown RBP6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 HTR7P34969 479 aa6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 UQCRFS1P47985 274 aa6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 SEPHS1P49903 392 aa6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 EPHB1P54762 984 aa6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 MC2RQ01718 297 aa6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 IL10RBQ08334 325 aa6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 SLC10A7Q0GE19 358 aa6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 ABHD18Q0P651 414 aa6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 PTP4A2Q12974 167 aa6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 RFTN1Q14699 578 aaPredicted RBP6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 PTPRRQ15256 657 aa6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 CA9Q16790 459 aa6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 TCP11X2Q5H9J9 407 aa6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 FHL5Q5TD97 284 aa6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 TMCO4Q5TGY1 634 aa6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 RFX8Q6ZV50 586 aa6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 ASB18Q6ZVZ8 466 aa6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 MON1BQ7L1V2 547 aa6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 TIPARPQ7Z3E1 657 aaKnown RBP6.64□□□□□ -1.35
RTFDC1-206ENST00000477485 C17orf82Q86X59 251 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms