RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 NOX1Q9Y5S8 564 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 CASP8AP2Q9UKL3 1982 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 A0A0J9YYE9 177 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 FAM95CA0A1B0GW59 222 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 TYW5A2RUC4 315 aaKnown RBP15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 KCNH1O95259 989 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 MATN4O95460 622 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 PTPN3P26045 913 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 HOXD10P28358 340 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 TPTEP56180 551 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 GRIK4Q16099 956 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 DGUOKQ16854 277 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 TECRLQ5HYJ1 363 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 TTC23Q5W5X9 447 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 NAPEPLDQ6IQ20 393 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 AKAP14Q86UN6 197 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 ZBTB46Q86UZ6 589 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 RETREG3Q86VR2 466 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 SPARTQ8N0X7 666 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 ZCCHC7Q8N3Z6 543 aaKnown RBP15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 MFSD4AQ8N468 514 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 HERC2P3Q9BVR0 1158 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 NECTIN3Q9NQS3 549 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 TNFSF13BQ9Y275 285 aa15.24■□□□□ 0.03
CLSTN1-205ENST00000477264 RALGAPA2Q2PPJ7 1873 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 RRN3P2A6NIE6 340 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 UBXN8O00124 270 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 NR5A2O00482 541 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 NRP1O14786 923 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 IPO13O94829 963 aaKnown RBP15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 GABARAPO95166 117 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 AVPR1AP37288 418 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 VEGFBP49765 207 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 ALDH3A2P51648 485 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 CDH17Q12864 832 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 AQP6Q13520 282 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 CRY1Q16526 586 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 KYAT1Q16773 422 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 PPP1R3AQ16821 1122 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 TMEM132AQ24JP5 1023 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 C6orf183Q5T699 404 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 JADE1Q6IE81 842 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 FUNDC1Q8IVP5 155 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 VAT1Q99536 393 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 SLC39A3Q9BRY0 314 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 CEP41Q9BYV8 373 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 SACM1LQ9NTJ5 587 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 FAM49BQ9NUQ9 324 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 GDAP2Q9NXN4 497 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.23■□□□□ 0.033e-6■■■□□ 19.1
CLSTN1-205ENST00000477264 AKT3Q9Y243 479 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 NAALAD2Q9Y3Q0 740 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 SNX5Q9Y5X3 404 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 ST14Q9Y5Y6 855 aa15.23■□□□□ 0.03
CLSTN1-205ENST00000477264 FXYD1O00168 92 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 DUSP11O75319 330 aaKnown RBP15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 F2P00734 622 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 THRBP10828 461 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 CYBAP13498 195 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 SAT1P21673 171 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 ELK4P28324 431 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 POU4F1Q01851 419 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 DAG1Q14118 895 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 PLCL1Q15111 1095 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 FSCN1Q16658 493 aaKnown RBP15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 PITRM1Q5JRX3 1037 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 LDLRAP1Q5SW96 308 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 CHST15Q7LFX5 561 aaPredicted RBP15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 SLCO6A1Q86UG4 719 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 ARMC8Q8IUR7 673 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 MIER2Q8N344 545 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 PDZD8Q8NEN9 1154 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 PHF10Q8WUB8 498 aaKnown RBP15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 CHAC2Q8WUX2 184 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 AURKBQ96GD4 344 aaPredicted RBP15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 ELMO2Q96JJ3 720 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 NACA2Q9H009 215 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 FZD8Q9H461 694 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 SPC25Q9HBM1 224 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 CMTM6Q9NX76 183 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 MAP10Q9P2G4 905 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 EGFL7Q9UHF1 273 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 BAG5Q9UL15 447 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 SLC27A5Q9Y2P5 690 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 FIS1Q9Y3D6 152 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 CITO14578 2027 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 INPP4BO15327 924 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 RBP1P09455 135 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 HNRNPLP14866 589 aaKnown RBP eCLIP15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 ACADSBP45954 432 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 EEFSECP57772 596 aaKnown RBP15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 CAMK2BQ13554 666 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 FAM83EQ2M2I3 478 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 KIF19Q2TAC6 998 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 INAVAQ3KP66 663 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 TIGD2Q4W5G0 525 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 INTS6LQ5JSJ4 861 aaKnown RBP15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 CERCAMQ5T4B2 595 aa15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 PPP1R26Q5T8A7 1209 aaPredicted RBP15.22■□□□□ 0.03
CLSTN1-205ENST00000477264 AGAP9Q5VTM2 703 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms