RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 BROXQ5VW32 411 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 OR14C36Q8NHC7 312 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 PRDM16Q9HAZ2 1276 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 EVLQ9UI08 416 aaPredicted RBP10.95□□□□□ -0.66
VAPB-204ENST00000475243 ENPP3O14638 875 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 HDAC3O15379 428 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 CLCNKBP51801 687 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 KCNA10Q16322 511 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 MZT2BQ6NZ67 158 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 GK5Q6ZS86 529 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 CHSY3Q70JA7 882 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 PHYKPLQ8IUZ5 450 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 KAT2AQ92830 837 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.95□□□□□ -0.662e-9■■■■■ 28.8
VAPB-204ENST00000475243 TRMT13Q9NUP7 481 aaKnown RBP10.95□□□□□ -0.66
VAPB-204ENST00000475243 KLRG2A4D1S0 409 aaPredicted RBP10.95□□□□□ -0.66
VAPB-204ENST00000475243 GCATO75600 419 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 SEC24AO95486 1093 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 SPIRE1Q08AE8 756 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 LSM12Q3MHD2 195 aaKnown RBP10.95□□□□□ -0.66
VAPB-204ENST00000475243 OLFML2AQ68BL7 652 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 CPXM1Q96SM3 734 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 PCDH18Q9HCL0 1135 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 COMMD9Q9P000 198 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 TIMM22Q9Y584 194 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 NRP2O60462 931 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 SERPINB7O75635 380 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 TXNDC11Q6PKC3 985 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 POC5Q8NA72 575 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 SHC3Q92529 594 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 MYDGFQ969H8 173 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 LENG1Q96BZ8 264 aaPredicted RBP10.95□□□□□ -0.66
VAPB-204ENST00000475243 PPM1MQ96MI6 270 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 INTS7Q9NVH2 962 aaKnown RBP10.95□□□□□ -0.66
VAPB-204ENST00000475243 TBC1D30Q9Y2I9 924 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 CCDC182A6NF36 153 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 ADSSP30520 456 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 TOP3AQ13472 1001 aaPredicted RBP10.95□□□□□ -0.66
VAPB-204ENST00000475243 ATG14Q6ZNE5 492 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 CAPSLQ8WWF8 208 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 GPC6Q9Y625 555 aaPredicted RBP10.95□□□□□ -0.66
VAPB-204ENST00000475243 LMTK2Q8IWU2 1503 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 NCANO14594 1321 aa10.95□□□□□ -0.66
VAPB-204ENST00000475243 QSOX1O00391 747 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 TRIM38O00635 465 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 TIPRLO75663 272 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 UNC5CO95185 931 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 FGF1P05230 155 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 MYL9P24844 172 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 RPL3P39023 403 aaKnown RBP10.94□□□□□ -0.66
VAPB-204ENST00000475243 GRM5P41594 1212 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 LRRC38Q5VT99 294 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 RNF43Q68DV7 783 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 TTC27Q6P3X3 843 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 UBAP1Q9NZ09 502 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 A0A0J9YYE9 177 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 SUV39H1O43463 412 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 MATN4O95460 622 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 SERPINA6P08185 405 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 IDO1P14902 403 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 MPSTP25325 297 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 IGFALSP35858 605 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 SLC7A2P52569 658 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 PIWIL4Q7Z3Z4 852 aaKnown RBP10.94□□□□□ -0.66
VAPB-204ENST00000475243 WDR55Q9H6Y2 383 aaPredicted RBP10.94□□□□□ -0.66
VAPB-204ENST00000475243 RIPK3Q9Y572 518 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 MYBL2P10244 700 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 LMLNQ96KR4 655 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 OXCT2Q9BYC2 517 aaPredicted RBP10.94□□□□□ -0.66
VAPB-204ENST00000475243 ERVK-5Q9HDB9 667 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 MAPRE3Q9UPY8 281 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 OR2AG2A6NM03 316 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 GRM6O15303 877 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 EPHX1P07099 455 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 CCNYL2Q5T2Q4 361 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 DUPD1Q68J44 220 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 C17orf64Q86WR6 236 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 SLC39A8Q9C0K1 460 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 CDH19Q9H159 772 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 MAP4K5Q9Y4K4 846 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 E9PAM4 449 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 TGFB1I1O43294 461 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 TRBC1P01850 177 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 NT5EP21589 574 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 FOLH1Q04609 750 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 SCRN3Q0VDG4 424 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 PPM1JQ5JR12 505 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 SPDYCQ5MJ68 293 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 CPTPQ5TA50 214 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 ACMSDQ8TDX5 336 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 PIH1D2Q8WWB5 315 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 XAGE5Q8WWM1 108 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 MFSD14AQ96MC6 490 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 KREMEN1Q96MU8 473 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 HBEGFQ99075 208 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 LRRC4CQ9HCJ2 640 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 RAI2Q9Y5P3 530 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 ARHGEF28Q8N1W1 1705 aaKnown RBP10.94□□□□□ -0.66
VAPB-204ENST00000475243 CCL22O00626 93 aa10.94□□□□□ -0.66
VAPB-204ENST00000475243 MAGP20916 626 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms