RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 SH3RF2Q8TEC5 729 aa21.7■■□□□ 1.07
CCM2-206ENST00000474617 PIH1D2Q8WWB5 315 aa21.7■■□□□ 1.07
CCM2-206ENST00000474617 KIAA1191Q96A73 305 aa21.7■■□□□ 1.07
CCM2-206ENST00000474617 LYSMD1Q96S90 227 aa21.7■■□□□ 1.07
CCM2-206ENST00000474617 GPR63Q9BZJ6 419 aa21.7■■□□□ 1.07
CCM2-206ENST00000474617 SLC30A1Q9Y6M5 507 aa21.7■■□□□ 1.07
CCM2-206ENST00000474617 CCL22O00626 93 aa21.7■■□□□ 1.06
CCM2-206ENST00000474617 ZNF197O14709 1029 aa21.7■■□□□ 1.06
CCM2-206ENST00000474617 SLC9A3R1O14745 358 aaPredicted RBP21.7■■□□□ 1.06
CCM2-206ENST00000474617 CHRNGP07510 517 aa21.7■■□□□ 1.06
CCM2-206ENST00000474617 ABL2P42684 1182 aa21.7■■□□□ 1.06
CCM2-206ENST00000474617 ERVFC1P60507 584 aa21.7■■□□□ 1.06
CCM2-206ENST00000474617 SEMA3AQ14563 771 aa21.7■■□□□ 1.06
CCM2-206ENST00000474617 ZDHHC20Q5W0Z9 365 aa21.7■■□□□ 1.06
CCM2-206ENST00000474617 ATG14Q6ZNE5 492 aa21.7■■□□□ 1.06
CCM2-206ENST00000474617 LDB1Q86U70 411 aaPredicted RBP21.7■■□□□ 1.06
CCM2-206ENST00000474617 PCDH20Q8N6Y1 951 aaKnown RBP21.7■■□□□ 1.06
CCM2-206ENST00000474617 KDM1BQ8NB78 822 aa21.7■■□□□ 1.06
CCM2-206ENST00000474617 SHKBP1Q8TBC3 707 aa21.7■■□□□ 1.06
CCM2-206ENST00000474617 SPPL3Q8TCT6 385 aa21.7■■□□□ 1.06
CCM2-206ENST00000474617 ANKRD49Q8WVL7 239 aa21.7■■□□□ 1.06
CCM2-206ENST00000474617 BADQ92934 168 aa21.7■■□□□ 1.06
CCM2-206ENST00000474617 MAELQ96JY0 434 aaKnown RBP21.7■■□□□ 1.06
CCM2-206ENST00000474617 LMLNQ96KR4 655 aa21.7■■□□□ 1.06
CCM2-206ENST00000474617 MIPEPQ99797 713 aa21.7■■□□□ 1.06
CCM2-206ENST00000474617 SLC2A11Q9BYW1 496 aa21.7■■□□□ 1.06
CCM2-206ENST00000474617 ZDHHC7Q9NXF8 308 aa21.7■■□□□ 1.06
CCM2-206ENST00000474617 SLC25A13Q9UJS0 675 aa21.7■■□□□ 1.06
CCM2-206ENST00000474617 A0A0J9YYE9 177 aa21.69■■□□□ 1.06
CCM2-206ENST00000474617 CCL16O15467 120 aa21.69■■□□□ 1.06
CCM2-206ENST00000474617 KERAO60938 352 aa21.69■■□□□ 1.06
CCM2-206ENST00000474617 TRBC1P01850 177 aa21.69■■□□□ 1.06
CCM2-206ENST00000474617 RPS3P23396 243 aaKnown RBP eCLIP21.69■■□□□ 1.06
CCM2-206ENST00000474617 HERVK_113P63132 956 aa21.69■■□□□ 1.06
CCM2-206ENST00000474617 HERC3Q15034 1050 aa21.69■■□□□ 1.06
CCM2-206ENST00000474617 CRY1Q16526 586 aa21.69■■□□□ 1.06
CCM2-206ENST00000474617 RNF135Q8IUD6 432 aa21.69■■□□□ 1.06
CCM2-206ENST00000474617 APCDD1Q8J025 514 aa21.69■■□□□ 1.06
CCM2-206ENST00000474617 EFHBQ8N7U6 833 aa21.69■■□□□ 1.06
CCM2-206ENST00000474617 WFDC5Q8TCV5 224 aa21.69■■□□□ 1.06
CCM2-206ENST00000474617 POF1BQ8WVV4 589 aa21.69■■□□□ 1.06
CCM2-206ENST00000474617 PRR11Q96HE9 360 aaPredicted RBP21.69■■□□□ 1.06
CCM2-206ENST00000474617 SAMD11Q96NU1 681 aa21.69■■□□□ 1.06
CCM2-206ENST00000474617 ANKRD27Q96NW4 1050 aa21.69■■□□□ 1.06
CCM2-206ENST00000474617 ERVK-6Q9BXR3 956 aa21.69■■□□□ 1.06
CCM2-206ENST00000474617 CPEB1Q9BZB8 566 aaKnown RBP21.69■■□□□ 1.06
CCM2-206ENST00000474617 TDP1Q9NUW8 608 aa21.69■■□□□ 1.06
CCM2-206ENST00000474617 UBA6A0AVT1 1052 aaPredicted RBP21.68■■□□□ 1.06
CCM2-206ENST00000474617 GRID2O43424 1007 aa21.68■■□□□ 1.06
CCM2-206ENST00000474617 BUD23O43709 281 aaKnown RBP21.68■■□□□ 1.06
CCM2-206ENST00000474617 THRAP10827 490 aa21.68■■□□□ 1.06
CCM2-206ENST00000474617 NCF2P19878 526 aaPredicted RBP21.68■■□□□ 1.06
CCM2-206ENST00000474617 SP100P23497 879 aaPredicted RBP21.68■■□□□ 1.06
CCM2-206ENST00000474617 PGM1P36871 562 aa21.68■■□□□ 1.06
CCM2-206ENST00000474617 GPR33Q49SQ1 333 aa21.68■■□□□ 1.06
CCM2-206ENST00000474617 PITRM1Q5JRX3 1037 aa21.68■■□□□ 1.06
CCM2-206ENST00000474617 PLPP4Q5VZY2 271 aa21.68■■□□□ 1.06
CCM2-206ENST00000474617 TXNDC11Q6PKC3 985 aa21.68■■□□□ 1.06
CCM2-206ENST00000474617 TMEM207Q6UWW9 146 aa21.68■■□□□ 1.06
CCM2-206ENST00000474617 RINLQ6ZS11 566 aa21.68■■□□□ 1.06
CCM2-206ENST00000474617 GRIN3AQ8TCU5 1115 aa21.68■■□□□ 1.06
CCM2-206ENST00000474617 ACTRT2Q8TDY3 377 aa21.68■■□□□ 1.06
CCM2-206ENST00000474617 ZNF641Q96N77 438 aaPredicted RBP21.68■■□□□ 1.06
CCM2-206ENST00000474617 ALG9Q9H6U8 611 aa21.68■■□□□ 1.06
CCM2-206ENST00000474617 ZFYVE1Q9HBF4 777 aa21.68■■□□□ 1.06
CCM2-206ENST00000474617 NDE1Q9NXR1 346 aa21.68■■□□□ 1.06
CCM2-206ENST00000474617 ZDHHC2Q9UIJ5 367 aa21.68■■□□□ 1.06
CCM2-206ENST00000474617 FKBPLQ9UIM3 349 aa21.68■■□□□ 1.06
CCM2-206ENST00000474617 TRMT6Q9UJA5 497 aaKnown RBP21.68■■□□□ 1.06
CCM2-206ENST00000474617 PPIL1Q9Y3C6 166 aa21.68■■□□□ 1.06
CCM2-206ENST00000474617 CAPN8A6NHC0 703 aa21.67■■□□□ 1.06
CCM2-206ENST00000474617 TM7SF2O76062 418 aa21.67■■□□□ 1.06
CCM2-206ENST00000474617 SLC4A1P02730 911 aa21.67■■□□□ 1.06
CCM2-206ENST00000474617 NFKBIAP25963 317 aa21.67■■□□□ 1.06
CCM2-206ENST00000474617 WEE1P30291 646 aa21.67■■□□□ 1.06
CCM2-206ENST00000474617 VASPP50552 380 aaPredicted RBP21.67■■□□□ 1.06
CCM2-206ENST00000474617 INHBCP55103 352 aa21.67■■□□□ 1.06
CCM2-206ENST00000474617 TIAL1Q01085 375 aaKnown RBP eCLIP21.67■■□□□ 1.06
CCM2-206ENST00000474617 UBAP2LQ14157 1087 aaKnown RBP21.67■■□□□ 1.06
CCM2-206ENST00000474617 PTPRCAPQ14761 206 aa21.67■■□□□ 1.06
CCM2-206ENST00000474617 PTPRNQ16849 979 aa21.67■■□□□ 1.06
CCM2-206ENST00000474617 SLC9B1Q4ZJI4 515 aa21.67■■□□□ 1.06
CCM2-206ENST00000474617 ZRANB3Q5FWF4 1079 aa21.67■■□□□ 1.06
CCM2-206ENST00000474617 ZNF678Q5SXM1 525 aa21.67■■□□□ 1.06
CCM2-206ENST00000474617 SPATA6LQ8N4H0 392 aa21.67■■□□□ 1.06
CCM2-206ENST00000474617 CEP70Q8NHQ1 597 aa21.67■■□□□ 1.06
CCM2-206ENST00000474617 PDLIM5Q96HC4 596 aaKnown RBP21.67■■□□□ 1.06
CCM2-206ENST00000474617 MARK1Q9P0L2 795 aa21.67■■□□□ 1.06
CCM2-206ENST00000474617 KIAA0100Q14667 2235 aaKnown RBP21.67■■□□□ 1.06
CCM2-206ENST00000474617 CIB2O75838 187 aa21.66■■□□□ 1.06
CCM2-206ENST00000474617 MT-CO1P00395 513 aa21.66■■□□□ 1.06
CCM2-206ENST00000474617 ZNF7P17097 686 aaPredicted RBP21.66■■□□□ 1.06
CCM2-206ENST00000474617 ITGALP20701 1170 aa21.66■■□□□ 1.06
CCM2-206ENST00000474617 MXRA7P84157 204 aa21.66■■□□□ 1.06
CCM2-206ENST00000474617 XIAPP98170 497 aa21.66■■□□□ 1.06
CCM2-206ENST00000474617 KDSRQ06136 332 aa21.66■■□□□ 1.06
CCM2-206ENST00000474617 PEX6Q13608 980 aa21.66■■□□□ 1.06
CCM2-206ENST00000474617 NAA25Q14CX7 972 aa21.66■■□□□ 1.06
CCM2-206ENST00000474617 TRMT5Q32P41 509 aaKnown RBP21.66■■□□□ 1.06
CCM2-206ENST00000474617 ATXN7L2Q5T6C5 722 aaPredicted RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms