RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 SLCO1A2P46721 670 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 DRG2P55039 364 aaKnown RBP4.61□□□□□ -1.67
CCNL1-215ENST00000474539 ELAVL3Q14576 367 aaKnown RBP4.61□□□□□ -1.67
CCNL1-215ENST00000474539 PRPF38BQ5VTL8 546 aaKnown RBP4.61□□□□□ -1.67
CCNL1-215ENST00000474539 C1orf146Q5VVC0 180 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 FAM220AQ7Z4H9 259 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 SPATA21Q7Z572 469 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 SPATA19Q7Z5L4 167 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 TMC3Q7Z5M5 1100 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 GPIHBP1Q8IV16 184 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 ANKMY2Q8IV38 441 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 APLFQ8IW19 511 aaPredicted RBP4.61□□□□□ -1.67
CCNL1-215ENST00000474539 LSMEM2Q8N112 164 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 ZCCHC9Q8N567 271 aaKnown RBP4.61□□□□□ -1.67
CCNL1-215ENST00000474539 KDM1BQ8NB78 822 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 ICA1LQ8NDH6 482 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 SELENOMQ8WWX9 145 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 THRSPQ92748 146 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 Q96MT0 163 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 THUMPD3Q9BV44 507 aaKnown RBP4.61□□□□□ -1.67
CCNL1-215ENST00000474539 PARD6BQ9BYG5 372 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 GBA3Q9H227 469 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 EPB41L4BQ9H329 900 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 MMADHCQ9H3L0 296 aaPredicted RBP4.61□□□□□ -1.67
CCNL1-215ENST00000474539 DPEP2Q9H4A9 486 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 PREBQ9HCU5 417 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 GKN1Q9NS71 199 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 SPATA7Q9P0W8 599 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 SCOCQ9UIL1 159 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 PCDHGA11Q9Y5H2 935 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 RGPD8O14715 1765 aaPredicted RBP4.61□□□□□ -1.67
CCNL1-215ENST00000474539 A0A087X0B3 334 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 MTMR11A4FU01 709 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 BBIP1A8MTZ0 92 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 PROM1O43490 865 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 LYPLA1O75608 230 aaPredicted RBP4.61□□□□□ -1.67
CCNL1-215ENST00000474539 ENDOD1O94919 500 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 GYPCP04921 128 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 UGT2B4P06133 528 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 RHOP08100 348 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 RARAP10276 462 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 PRPS2P11908 318 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 IMPDH2P12268 514 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 UGT1A1P22309 533 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 MMP8P22894 467 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 CASP1P29466 404 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 HNF4AP41235 474 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 CENPAP49450 140 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 ITGA1P56199 1179 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 VSNL1P62760 191 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 FMR1Q06787 632 aaKnown RBP eCLIP4.61□□□□□ -1.67
CCNL1-215ENST00000474539 MKRN4PQ13434 485 aaPredicted RBP4.61□□□□□ -1.67
CCNL1-215ENST00000474539 TDGQ13569 410 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 LRP8Q14114 963 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 FRG1Q14331 258 aaKnown RBP4.61□□□□□ -1.67
CCNL1-215ENST00000474539 HEPACAMQ14CZ8 416 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 LARS2Q15031 903 aaKnown RBP4.61□□□□□ -1.67
CCNL1-215ENST00000474539 TOMM20Q15388 145 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 SF1Q15637 639 aaKnown RBP4.61□□□□□ -1.67
CCNL1-215ENST00000474539 PLEKHG4Q58EX7 1191 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 BEND6Q5SZJ8 279 aaPredicted RBP4.61□□□□□ -1.67
CCNL1-215ENST00000474539 PPP1R26Q5T8A7 1209 aaPredicted RBP4.61□□□□□ -1.67
CCNL1-215ENST00000474539 LYSMD4Q5XG99 296 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 PLEKHA7Q6IQ23 1121 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 MSANTD2Q6P1R3 559 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 SLC29A4Q7RTT9 530 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 CYP4X1Q8N118 509 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 RASGEF1AQ8N9B8 481 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 ATAD1Q8NBU5 361 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 TRPV3Q8NET8 790 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 CMASQ8NFW8 434 aaPredicted RBP4.61□□□□□ -1.67
CCNL1-215ENST00000474539 OR5L2Q8NGL0 311 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 FAR1Q8WVX9 515 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 SMPDL3AQ92484 453 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 ATOH1Q92858 354 aaPredicted RBP4.61□□□□□ -1.67
CCNL1-215ENST00000474539 CELF6Q96J87 481 aaKnown RBP4.61□□□□□ -1.67
CCNL1-215ENST00000474539 NSMCE3Q96MG7 304 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 C5orf34Q96MH7 638 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 QKIQ96PU8 341 aaKnown RBP eCLIP4.61□□□□□ -1.673e-6■■□□□ 14.5
CCNL1-215ENST00000474539 MRPL45Q9BRJ2 306 aaKnown RBP4.61□□□□□ -1.67
CCNL1-215ENST00000474539 HGH1Q9BTY7 390 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 GTPBP2Q9BX10 602 aaKnown RBP4.61□□□□□ -1.67
CCNL1-215ENST00000474539 POLD4Q9HCU8 107 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 TIGARQ9NQ88 270 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 TMEM184CQ9NVA4 438 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 FBXL12Q9NXK8 326 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 ZDHHC3Q9NYG2 299 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 GHRLQ9UBU3 117 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 SFMBT1Q9UHJ3 866 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 BAIAP2L1Q9UHR4 511 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 SUFUQ9UMX1 484 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 L1RE1Q9UN81 338 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 GABRQQ9UN88 632 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 SRPK3Q9UPE1 567 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 ENTPD2Q9Y5L3 495 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 STYXL1Q9Y6J8 313 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 PAPPA2Q9BXP8 1791 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 NT5C1B-RDH14C9J2C7 533 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 UBDO15205 165 aa4.61□□□□□ -1.67
CCNL1-215ENST00000474539 BIRC5O15392 142 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms