RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 PAK5Q9P286 719 aa13.71□□□□□ -0.21
USF1-205ENST00000473969 FEZ2Q9UHY8 353 aaPredicted RBP13.71□□□□□ -0.21
USF1-205ENST00000473969 DRG1Q9Y295 367 aaKnown RBP13.71□□□□□ -0.21
USF1-205ENST00000473969 PKP3Q9Y446 797 aa13.71□□□□□ -0.21
USF1-205ENST00000473969 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.71□□□□□ -0.21
USF1-205ENST00000473969 CEP250Q9BV73 2442 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 C2orf81A6NN90 581 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 K7ESM1 405 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 CES2O00748 559 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 TNFRSF10CO14798 259 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 AQP9O43315 295 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 ASMTLO95671 621 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 GAS8O95995 478 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 ATXN1LP0C7T5 689 aaKnown RBP13.7□□□□□ -0.22
USF1-205ENST00000473969 MYCLP1P12525 358 aaPredicted RBP13.7□□□□□ -0.22
USF1-205ENST00000473969 TCP1P17987 556 aaKnown RBP13.7□□□□□ -0.22
USF1-205ENST00000473969 CHRNA4P43681 627 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 HK3P52790 923 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 CDKN3Q16667 212 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 PRRT3Q5FWE3 981 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 TPRG1LQ5T0D9 272 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 ADAMTSL4Q6UY14 1074 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 RFLNAQ6ZTI6 216 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 LINC00523Q86TU6 105 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 RASGEF1CQ8N431 466 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 TAB3Q8N5C8 712 aaPredicted RBP13.7□□□□□ -0.22
USF1-205ENST00000473969 SCG3Q8WXD2 468 aaKnown RBP13.7□□□□□ -0.22
USF1-205ENST00000473969 RTP4Q96DX8 246 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 HIC2Q96JB3 615 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 NAPGQ99747 312 aaPredicted RBP13.7□□□□□ -0.22
USF1-205ENST00000473969 APOL2Q9BQE5 337 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 DUSP23Q9BVJ7 150 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 TEX101Q9BY14 249 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.7□□□□□ -0.22
USF1-205ENST00000473969 SNX12Q9UMY4 172 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 BTBD3Q9Y2F9 522 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 CSNK1G3Q9Y6M4 447 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 DOCK9Q9BZ29 2069 aa13.7□□□□□ -0.22
USF1-205ENST00000473969 CTAGE9A4FU28 777 aa13.69□□□□□ -0.22
USF1-205ENST00000473969 ERI2A8K979 691 aaKnown RBP13.69□□□□□ -0.22
USF1-205ENST00000473969 GIPC1O14908 333 aa13.69□□□□□ -0.22
USF1-205ENST00000473969 SCAMP1O15126 338 aa13.69□□□□□ -0.22
USF1-205ENST00000473969 INPP4BO15327 924 aa13.69□□□□□ -0.22
USF1-205ENST00000473969 STX7O15400 261 aaKnown RBP13.69□□□□□ -0.22
USF1-205ENST00000473969 FFAR2O15552 330 aa13.69□□□□□ -0.22
USF1-205ENST00000473969 TNFSF14O43557 240 aa13.69□□□□□ -0.22
USF1-205ENST00000473969 METTL18O95568 372 aa13.69□□□□□ -0.22
USF1-205ENST00000473969 CRTAMO95727 393 aa13.69□□□□□ -0.22
USF1-205ENST00000473969 ANXA6P08133 673 aa13.69□□□□□ -0.22
USF1-205ENST00000473969 HMGCLP35914 325 aa13.69□□□□□ -0.22
USF1-205ENST00000473969 CDK3Q00526 305 aa13.69□□□□□ -0.22
USF1-205ENST00000473969 PDE1BQ01064 536 aa13.69□□□□□ -0.22
USF1-205ENST00000473969 SPARCL1Q14515 664 aa13.69□□□□□ -0.22
USF1-205ENST00000473969 ELOCQ15369 112 aa13.69□□□□□ -0.22
USF1-205ENST00000473969 SIX1Q15475 284 aaPredicted RBP13.69□□□□□ -0.22
USF1-205ENST00000473969 ALG11Q2TAA5 492 aa13.69□□□□□ -0.22
USF1-205ENST00000473969 ALS2CLQ60I27 953 aa13.69□□□□□ -0.22
USF1-205ENST00000473969 RANBP10Q6VN20 620 aa13.69□□□□□ -0.22
USF1-205ENST00000473969 GKN2Q86XP6 184 aa13.69□□□□□ -0.22
USF1-205ENST00000473969 FSTL5Q8N475 847 aaPredicted RBP13.69□□□□□ -0.22
USF1-205ENST00000473969 PDCD7Q8N8D1 485 aaKnown RBP13.69□□□□□ -0.22
USF1-205ENST00000473969 ZNF548Q8NEK5 533 aaPredicted RBP13.69□□□□□ -0.22
USF1-205ENST00000473969 GLMNQ92990 594 aa13.69□□□□□ -0.22
USF1-205ENST00000473969 MAGOHBQ96A72 148 aaKnown RBP13.69□□□□□ -0.22
USF1-205ENST00000473969 CNDP2Q96KP4 475 aaKnown RBP13.69□□□□□ -0.22
USF1-205ENST00000473969 TBATAQ96M53 351 aa13.69□□□□□ -0.22
USF1-205ENST00000473969 ZSCAN5AQ9BUG6 496 aa13.69□□□□□ -0.22
USF1-205ENST00000473969 CYP4F12Q9HCS2 524 aa13.69□□□□□ -0.22
USF1-205ENST00000473969 BPIFA1Q9NP55 256 aa13.69□□□□□ -0.22
USF1-205ENST00000473969 TTC7AQ9ULT0 858 aaPredicted RBP13.69□□□□□ -0.22
USF1-205ENST00000473969 APOBEC2Q9Y235 224 aaKnown RBP13.69□□□□□ -0.22
USF1-205ENST00000473969 KNL1Q8NG31 2342 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 SPAARA0A1B0GVQ0 90 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 PRSS38A1L453 326 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 TMEM202A6NGA9 273 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 PPFIA2O75334 1257 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 AP2A1O95782 977 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 ADRA1AP35348 466 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 DCDC1P59894 354 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 DAB2P98082 770 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 C1orf61Q13536 156 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 TAF1AQ15573 450 aaPredicted RBP13.68□□□□□ -0.22
USF1-205ENST00000473969 HENMT1Q5T8I9 393 aaKnown RBP13.68□□□□□ -0.22
USF1-205ENST00000473969 DOK6Q6PKX4 331 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 PPP1R21Q6ZMI0 780 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 RBFAQ8N0V3 343 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 PELI3Q8N2H9 469 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 SDR16C5Q8N3Y7 309 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 SLC25A45Q8N413 288 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 TRAM1L1Q8N609 369 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 DNAAF3Q8N9W5 541 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 OR4C6Q8NH72 309 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 BRSK1Q8TDC3 778 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 ACTRT1Q8TDG2 376 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 MS4A14Q96JA4 679 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 LGR4Q9BXB1 951 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 AP1M1Q9BXS5 423 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 ETNK1Q9HBU6 452 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 RAB6BQ9NRW1 208 aa13.68□□□□□ -0.22
USF1-205ENST00000473969 UCKL1Q9NWZ5 548 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms