RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 MIGA1Q8NAN2 632 aa6.29□□□□□ -1.4
SEC22A-204ENST00000473494 SH3GL2Q99962 352 aa6.29□□□□□ -1.4
SEC22A-204ENST00000473494 KCNN2Q9H2S1 579 aa6.29□□□□□ -1.4
SEC22A-204ENST00000473494 NFKBIL1Q9UBC1 381 aaPredicted RBP6.29□□□□□ -1.4
SEC22A-204ENST00000473494 UBA2Q9UBT2 640 aaPredicted RBP6.29□□□□□ -1.4
SEC22A-204ENST00000473494 FAM169AQ9Y6X4 670 aa6.29□□□□□ -1.4
SEC22A-204ENST00000473494 TAF1P21675 1872 aa6.28□□□□□ -1.4
SEC22A-204ENST00000473494 IGHV4-28A0A0C4DH34 117 aa6.28□□□□□ -1.4
SEC22A-204ENST00000473494 C1orf226A1L170 272 aa6.28□□□□□ -1.4
SEC22A-204ENST00000473494 A8MV72 311 aaPredicted RBP6.28□□□□□ -1.4
SEC22A-204ENST00000473494 RGS14O43566 566 aa6.28□□□□□ -1.4
SEC22A-204ENST00000473494 SPRY3O43610 288 aa6.28□□□□□ -1.4
SEC22A-204ENST00000473494 ZNF500O60304 480 aaPredicted RBP6.28□□□□□ -1.4
SEC22A-204ENST00000473494 CYP1A2P05177 515 aa6.28□□□□□ -1.4
SEC22A-204ENST00000473494 EIF2S3P41091 472 aaKnown RBP6.28□□□□□ -1.4
SEC22A-204ENST00000473494 PRCPP42785 496 aa6.28□□□□□ -1.4
SEC22A-204ENST00000473494 MRPS5P82675 430 aaKnown RBP6.28□□□□□ -1.4
SEC22A-204ENST00000473494 RABEP1Q15276 862 aa6.28□□□□□ -1.4
SEC22A-204ENST00000473494 TWIST1Q15672 202 aa6.28□□□□□ -1.4
SEC22A-204ENST00000473494 DNTTIP2Q5QJE6 756 aaKnown RBP6.28□□□□□ -1.4
SEC22A-204ENST00000473494 KRT79Q5XKE5 535 aa6.28□□□□□ -1.4
SEC22A-204ENST00000473494 NAA16Q6N069 864 aaPredicted RBP6.28□□□□□ -1.4
SEC22A-204ENST00000473494 Q6ZTK2 550 aa6.28□□□□□ -1.4
SEC22A-204ENST00000473494 EPHX4Q8IUS5 362 aa6.28□□□□□ -1.4
SEC22A-204ENST00000473494 NRACQ8N912 160 aa6.28□□□□□ -1.4
SEC22A-204ENST00000473494 LRRC59Q96AG4 307 aaKnown RBP6.28□□□□□ -1.4
SEC22A-204ENST00000473494 MOAP1Q96BY2 351 aa6.28□□□□□ -1.4
SEC22A-204ENST00000473494 EGLN2Q96KS0 407 aa6.28□□□□□ -1.4
SEC22A-204ENST00000473494 SPRY4Q9C004 299 aa6.28□□□□□ -1.4
SEC22A-204ENST00000473494 FOXP1Q9H334 677 aaPredicted RBP6.28□□□□□ -1.4
SEC22A-204ENST00000473494 HRH4Q9H3N8 390 aa6.28□□□□□ -1.4
SEC22A-204ENST00000473494 NDST4Q9H3R1 872 aa6.28□□□□□ -1.4
SEC22A-204ENST00000473494 MAGIXQ9H6Y5 334 aa6.28□□□□□ -1.4
SEC22A-204ENST00000473494 MMP25Q9NPA2 562 aa6.28□□□□□ -1.4
SEC22A-204ENST00000473494 MTMR10Q9NXD2 777 aa6.28□□□□□ -1.4
SEC22A-204ENST00000473494 KANSL1LA0AUZ9 987 aa6.27□□□□□ -1.41
SEC22A-204ENST00000473494 MAP2K7O14733 419 aa6.27□□□□□ -1.41
SEC22A-204ENST00000473494 HSPA12AO43301 675 aa6.27□□□□□ -1.41
SEC22A-204ENST00000473494 ITM2AO43736 263 aa6.27□□□□□ -1.41
SEC22A-204ENST00000473494 MOSPD3O75425 235 aa6.27□□□□□ -1.41
SEC22A-204ENST00000473494 TOMM40O96008 361 aa6.27□□□□□ -1.41
SEC22A-204ENST00000473494 HIST1H2ABP04908 130 aa6.27□□□□□ -1.41
SEC22A-204ENST00000473494 NAGAP17050 411 aa6.27□□□□□ -1.41
SEC22A-204ENST00000473494 ANXA7P20073 488 aaKnown RBP6.27□□□□□ -1.41
SEC22A-204ENST00000473494 HIST1H2ADP20671 130 aa6.27□□□□□ -1.41
SEC22A-204ENST00000473494 GPR143P51810 404 aa6.27□□□□□ -1.41
SEC22A-204ENST00000473494 PPATQ06203 517 aa6.27□□□□□ -1.41
SEC22A-204ENST00000473494 SREBF2Q12772 1141 aa6.27□□□□□ -1.41
SEC22A-204ENST00000473494 EFNB3Q15768 340 aa6.27□□□□□ -1.41
SEC22A-204ENST00000473494 PNLIPRP3Q17RR3 467 aa6.27□□□□□ -1.41
SEC22A-204ENST00000473494 C15orf59Q2T9L4 293 aaPredicted RBP6.27□□□□□ -1.41
SEC22A-204ENST00000473494 EIF2S3LQ2VIR3 472 aaKnown RBP6.27□□□□□ -1.41
SEC22A-204ENST00000473494 RPUSD3Q6P087 351 aaKnown RBP6.27□□□□□ -1.41
SEC22A-204ENST00000473494 HIST3H2AQ7L7L0 130 aa6.27□□□□□ -1.41
SEC22A-204ENST00000473494 DNAAF5Q86Y56 855 aa6.27□□□□□ -1.41
SEC22A-204ENST00000473494 MCEMP1Q8IX19 187 aa6.27□□□□□ -1.41
SEC22A-204ENST00000473494 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.27□□□□□ -1.417e-11■■■■■ 35.1
SEC22A-204ENST00000473494 RCOR1Q9UKL0 485 aa6.27□□□□□ -1.41
SEC22A-204ENST00000473494 FZD10Q9ULW2 581 aa6.27□□□□□ -1.41
SEC22A-204ENST00000473494 CDC14AQ9UNH5 594 aa6.27□□□□□ -1.41
SEC22A-204ENST00000473494 R3HDM2Q9Y2K5 976 aaKnown RBP6.27□□□□□ -1.41
SEC22A-204ENST00000473494 PTRH2Q9Y3E5 179 aaKnown RBP6.27□□□□□ -1.41
SEC22A-204ENST00000473494 CECR2Q9BXF3 1484 aa6.27□□□□□ -1.41
SEC22A-204ENST00000473494 RPS10-NUDT3A0A1W2PQS6 291 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 LNP1A1A4G5 178 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 BECN2A8MW95 431 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 UBE2CO00762 179 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 PPEF2O14830 753 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 VNN2O95498 520 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 PSG1P11464 419 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 RRM1P23921 792 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 ABCG1P45844 678 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 NUDT6P53370 316 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 ROR2Q01974 943 aaKnown RBP6.26□□□□□ -1.41
SEC22A-204ENST00000473494 CXCL9Q07325 125 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 BAATQ14032 418 aaPredicted RBP6.26□□□□□ -1.41
SEC22A-204ENST00000473494 RASA2Q15283 850 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 ZNF805Q5CZA5 627 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 BMP2KLQ5H9B9 411 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 FRG2Q64ET8 278 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 SIGIRRQ6IA17 410 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 ZNF280DQ6N043 979 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 B3GNT6Q6ZMB0 384 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 COLCA1Q6ZS62 124 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 NEXN-AS1Q8NBZ9 246 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 CCDC191Q8NCU4 936 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 CEP295NLQ96MC4 621 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 LRFN5Q96NI6 719 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 MMTAG2Q9BU76 263 aaKnown RBP6.26□□□□□ -1.41
SEC22A-204ENST00000473494 PIGMQ9H3S5 423 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 ACSS1Q9NUB1 689 aaPredicted RBP6.26□□□□□ -1.41
SEC22A-204ENST00000473494 POT1Q9NUX5 634 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 PAG1Q9NWQ8 432 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 SLC9A2Q9UBY0 812 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 ACSL5Q9ULC5 683 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 PAM16Q9Y3D7 125 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 ZNF711Q9Y462 761 aa6.26□□□□□ -1.41
SEC22A-204ENST00000473494 ARHGEF40Q8TER5 1519 aa6.25□□□□□ -1.41
SEC22A-204ENST00000473494 A0A1B0GVM2 712 aa6.25□□□□□ -1.41
SEC22A-204ENST00000473494 WDR91A4D1P6 747 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms