RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 HOOK1Q9UJC3 728 aaKnown RBP7.28□□□□□ -1.24
A1CF-209ENST00000473480 SERTAD3Q9UJW9 196 aa7.28□□□□□ -1.24
A1CF-209ENST00000473480 PCDHA12Q9UN75 941 aa7.28□□□□□ -1.24
A1CF-209ENST00000473480 PRG3Q9Y2Y8 225 aaPredicted RBP7.28□□□□□ -1.24
A1CF-209ENST00000473480 ATXN2Q99700 1313 aaKnown RBP7.27□□□□□ -1.24
A1CF-209ENST00000473480 A0A087WWL8 130 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 TMEM150BA6NC51 233 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 HEPACAM2A8MVW5 462 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 BTN3A1O00481 513 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 ZNF197O14709 1029 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 SLC37A4O43826 429 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 GJB3O75712 270 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 MUTP22033 750 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 LRPAP1P30533 357 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 ACTN2P35609 894 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 PTGER3P43115 390 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 TFDP1Q14186 410 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 E2F2Q14209 437 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 ZRSR1Q15695 479 aaKnown RBP7.27□□□□□ -1.25
A1CF-209ENST00000473480 STX1AQ16623 288 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 XKR9Q5GH70 373 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 ZNF551Q7Z340 670 aaPredicted RBP7.27□□□□□ -1.25
A1CF-209ENST00000473480 HAUS6Q7Z4H7 955 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 TMPRSS12Q86WS5 348 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 SLC15A4Q8N697 577 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 RNF149Q8NC42 400 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 NTN5Q8WTR8 489 aaPredicted RBP7.27□□□□□ -1.25
A1CF-209ENST00000473480 TMEM143Q96AN5 459 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 B3GALT6Q96L58 329 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 SCLT1Q96NL6 688 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 SH2D3AQ9BRG2 576 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 DPH1Q9BZG8 443 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 PRDM16Q9HAZ2 1276 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 XPNPEP1Q9NQW7 623 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 SERTAD4Q9NUC0 356 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 MARCH5Q9NX47 278 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 RGL1Q9NZL6 768 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 F8P00451 2351 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 ABCA2Q9BZC7 2435 aa7.27□□□□□ -1.25
A1CF-209ENST00000473480 TNRC6BQ9UPQ9 1833 aaKnown RBP7.27□□□□□ -1.25
A1CF-209ENST00000473480 SPENQ96T58 3664 aaKnown RBP7.26□□□□□ -1.25
A1CF-209ENST00000473480 NAV3Q8IVL0 2385 aa7.26□□□□□ -1.25
A1CF-209ENST00000473480 GOLGA6CA6NDK9 693 aa7.26□□□□□ -1.25
A1CF-209ENST00000473480 GOLGA6BA6NDN3 693 aa7.26□□□□□ -1.25
A1CF-209ENST00000473480 MASP2O00187 686 aa7.26□□□□□ -1.25
A1CF-209ENST00000473480 SLC16A3O15427 465 aaKnown RBP7.26□□□□□ -1.25
A1CF-209ENST00000473480 CCNT1O60563 726 aaKnown RBP7.26□□□□□ -1.25
A1CF-209ENST00000473480 TSPAN1O60635 241 aa7.26□□□□□ -1.25
A1CF-209ENST00000473480 PDHA1P08559 390 aa7.26□□□□□ -1.25
A1CF-209ENST00000473480 GOLGA6DP0CG33 693 aa7.26□□□□□ -1.25
A1CF-209ENST00000473480 ARF4P18085 180 aaPredicted RBP7.26□□□□□ -1.25
A1CF-209ENST00000473480 HNF1BP35680 557 aa7.26□□□□□ -1.25
A1CF-209ENST00000473480 LONP1P36776 959 aaKnown RBP7.26□□□□□ -1.25
A1CF-209ENST00000473480 PRPHP41219 470 aa7.26□□□□□ -1.25
A1CF-209ENST00000473480 MBTD1Q05BQ5 628 aa7.26□□□□□ -1.25
A1CF-209ENST00000473480 DMC1Q14565 340 aa7.26□□□□□ -1.25
A1CF-209ENST00000473480 RGS7BPQ6MZT1 257 aaPredicted RBP7.26□□□□□ -1.25
A1CF-209ENST00000473480 TICAM1Q8IUC6 712 aa7.26□□□□□ -1.25
A1CF-209ENST00000473480 HACE1Q8IYU2 909 aa7.26□□□□□ -1.25
A1CF-209ENST00000473480 MYO1HQ8N1T3 1032 aa7.26□□□□□ -1.25
A1CF-209ENST00000473480 TSTD1Q8NFU3 115 aa7.26□□□□□ -1.25
A1CF-209ENST00000473480 NLRP4Q96MN2 994 aa7.26□□□□□ -1.25
A1CF-209ENST00000473480 EIF2AK1Q9BQI3 630 aaKnown RBP7.26□□□□□ -1.25
A1CF-209ENST00000473480 LXNQ9BS40 222 aa7.26□□□□□ -1.25
A1CF-209ENST00000473480 TRPV4Q9HBA0 871 aa7.26□□□□□ -1.25
A1CF-209ENST00000473480 ANO10Q9NW15 660 aa7.26□□□□□ -1.25
A1CF-209ENST00000473480 GOLGA6AQ9NYA3 693 aa7.26□□□□□ -1.25
A1CF-209ENST00000473480 GTSE1Q9NYZ3 720 aa7.26□□□□□ -1.25
A1CF-209ENST00000473480 NDRG4Q9ULP0 352 aaKnown RBP7.26□□□□□ -1.25
A1CF-209ENST00000473480 L1RE1Q9UN81 338 aa7.26□□□□□ -1.25
A1CF-209ENST00000473480 PCDH15Q96QU1 1955 aa7.26□□□□□ -1.25
A1CF-209ENST00000473480 OTOGQ6ZRI0 2925 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 LRRC3CA6NJW4 275 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 EBLN1P0CF75 366 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 JUPP14923 745 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 GLRA2P23416 452 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 SLC7A1P30825 629 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 ALDH9A1P49189 494 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 CCT8P50990 548 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 FCHO2Q0JRZ9 810 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 ELAVL2Q12926 359 aaKnown RBP7.25□□□□□ -1.25
A1CF-209ENST00000473480 SLC13A2Q13183 592 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 CTBP1Q13363 440 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 RAB32Q13637 225 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 PDIA5Q14554 519 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 EMC2Q15006 297 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 NAB2Q15742 525 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 CCDC142Q17RM4 750 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 MGAT5BQ3V5L5 792 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 XKR4Q5GH76 650 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 TMEM196Q5HYL7 178 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 PLA2G4FQ68DD2 849 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 SLC27A1Q6PCB7 646 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 KRBA2Q6ZNG9 492 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 CEP57L1Q8IYX8 460 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 ZNF248Q8NDW4 579 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 LNX1Q8TBB1 728 aaPredicted RBP7.25□□□□□ -1.25
A1CF-209ENST00000473480 SNRNP27Q8WVK2 155 aaKnown RBP7.25□□□□□ -1.25
A1CF-209ENST00000473480 CLSTN3Q9BQT9 956 aa7.25□□□□□ -1.25
A1CF-209ENST00000473480 MESP1Q9BRJ9 268 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms