RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 ANKRD34CP0C6C1 535 aa13.87□□□□□ -0.19
SMURF1-203ENST00000472627 CYP2A6P11509 494 aaPredicted RBP13.87□□□□□ -0.19
SMURF1-203ENST00000472627 COL8A1P27658 744 aa13.87□□□□□ -0.19
SMURF1-203ENST00000472627 GARSP41250 739 aaKnown RBP13.87□□□□□ -0.19
SMURF1-203ENST00000472627 AP1S1P61966 158 aa13.87□□□□□ -0.19
SMURF1-203ENST00000472627 IL11RAQ14626 422 aa13.87□□□□□ -0.19
SMURF1-203ENST00000472627 EIF2S3LQ2VIR3 472 aaKnown RBP13.87□□□□□ -0.19
SMURF1-203ENST00000472627 CCDC14Q49A88 953 aa13.87□□□□□ -0.19
SMURF1-203ENST00000472627 C2CD6Q53TS8 623 aa13.87□□□□□ -0.19
SMURF1-203ENST00000472627 TAF3Q5VWG9 929 aa13.87□□□□□ -0.19
SMURF1-203ENST00000472627 DENND2CQ68D51 928 aa13.87□□□□□ -0.19
SMURF1-203ENST00000472627 PHLDB2Q86SQ0 1253 aa13.87□□□□□ -0.19
SMURF1-203ENST00000472627 SLC9B2Q86UD5 537 aa13.87□□□□□ -0.19
SMURF1-203ENST00000472627 HPS6Q86YV9 775 aa13.87□□□□□ -0.19
SMURF1-203ENST00000472627 SRRM1Q8IYB3 904 aaKnown RBP13.87□□□□□ -0.19
SMURF1-203ENST00000472627 CCDC185Q8N715 623 aa13.87□□□□□ -0.19
SMURF1-203ENST00000472627 DTD2Q96FN9 168 aa13.87□□□□□ -0.19
SMURF1-203ENST00000472627 COQ10AQ96MF6 247 aa13.87□□□□□ -0.19
SMURF1-203ENST00000472627 C5orf34Q96MH7 638 aa13.87□□□□□ -0.19
SMURF1-203ENST00000472627 KLC2Q9H0B6 622 aa13.87□□□□□ -0.19
SMURF1-203ENST00000472627 ACSS2Q9NR19 701 aa13.87□□□□□ -0.19
SMURF1-203ENST00000472627 B4GALT6Q9UBX8 382 aa13.87□□□□□ -0.19
SMURF1-203ENST00000472627 PHTF1Q9UMS5 762 aa13.87□□□□□ -0.19
SMURF1-203ENST00000472627 PCDHGA6Q9Y5G7 932 aa13.87□□□□□ -0.19
SMURF1-203ENST00000472627 SPENQ96T58 3664 aaKnown RBP13.87□□□□□ -0.19
SMURF1-203ENST00000472627 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.86□□□□□ -0.19
SMURF1-203ENST00000472627 WASH4PA8MWX3 477 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 PPP1R3GB7ZBB8 358 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 C21orf140B9A014 251 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 PSMD11O00231 422 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 PRAMEF11O60813 436 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 SORBS2O94875 1100 aaKnown RBP13.86□□□□□ -0.19
SMURF1-203ENST00000472627 NDUFA10O95299 355 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 RNF224P0DH78 156 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 F8A1P23610 371 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 VIPR1P32241 457 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 HTR7P34969 479 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 GPR1P46091 355 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 LEPRP48357 1165 aaKnown RBP13.86□□□□□ -0.19
SMURF1-203ENST00000472627 RENBPP51606 427 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 NDST2P52849 883 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 AIF1P55008 147 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 APBA1Q02410 837 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 NSUN2Q08J23 767 aaKnown RBP eCLIP13.86□□□□□ -0.19
SMURF1-203ENST00000472627 NFATC2Q13469 925 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 DNASE1L3Q13609 305 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 RFTN1Q14699 578 aaPredicted RBP13.86□□□□□ -0.19
SMURF1-203ENST00000472627 INPP5JQ15735 1006 aaPredicted RBP13.86□□□□□ -0.19
SMURF1-203ENST00000472627 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.86□□□□□ -0.19
SMURF1-203ENST00000472627 NAA35Q5VZE5 725 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 GALNT6Q8NCL4 622 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 CPA5Q8WXQ8 436 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 HERPUD2Q9BSE4 406 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 SP110Q9HB58 689 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 PDFQ9HBH1 243 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 RCOR3Q9P2K3 495 aaPredicted RBP13.86□□□□□ -0.19
SMURF1-203ENST00000472627 CNOT8Q9UFF9 292 aaKnown RBP13.86□□□□□ -0.19
SMURF1-203ENST00000472627 LNPEPQ9UIQ6 1025 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 PADI1Q9ULC6 663 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 ZNF451Q9Y4E5 1061 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 PCDHGB7Q9Y5F8 929 aa13.86□□□□□ -0.19
SMURF1-203ENST00000472627 C2CD3Q4AC94 2353 aa13.85□□□□□ -0.19
SMURF1-203ENST00000472627 TRBV23OR9-2A0A075B6M9 112 aa13.85□□□□□ -0.19
SMURF1-203ENST00000472627 ANKRD62A6NC57 917 aa13.85□□□□□ -0.19
SMURF1-203ENST00000472627 C2CD4BA6NLJ0 364 aa13.85□□□□□ -0.19
SMURF1-203ENST00000472627 TCP11X1B4DZS4 312 aa13.85□□□□□ -0.19
SMURF1-203ENST00000472627 TOX3O15405 576 aaPredicted RBP13.85□□□□□ -0.19
SMURF1-203ENST00000472627 DPM1O60762 260 aa13.85□□□□□ -0.19
SMURF1-203ENST00000472627 CLDN1O95832 211 aa13.85□□□□□ -0.19
SMURF1-203ENST00000472627 FUCA1P04066 466 aa13.85□□□□□ -0.19
SMURF1-203ENST00000472627 PDGFAP04085 211 aa13.85□□□□□ -0.19
SMURF1-203ENST00000472627 PNMA6AP0CW24 399 aaPredicted RBP13.85□□□□□ -0.19
SMURF1-203ENST00000472627 GM2AP17900 193 aa13.85□□□□□ -0.19
SMURF1-203ENST00000472627 POLD2P49005 469 aa13.85□□□□□ -0.19
SMURF1-203ENST00000472627 HDAC4P56524 1084 aa13.85□□□□□ -0.19
SMURF1-203ENST00000472627 NOMO3P69849 1222 aa13.85□□□□□ -0.19
SMURF1-203ENST00000472627 CHRNA6Q15825 494 aa13.85□□□□□ -0.19
SMURF1-203ENST00000472627 CNGA3Q16281 694 aa13.85□□□□□ -0.19
SMURF1-203ENST00000472627 NADK2Q4G0N4 442 aa13.85□□□□□ -0.19
SMURF1-203ENST00000472627 ELOA2Q8IYF1 753 aaPredicted RBP13.85□□□□□ -0.19
SMURF1-203ENST00000472627 PELI3Q8N2H9 469 aa13.85□□□□□ -0.19
SMURF1-203ENST00000472627 TSEN2Q8NCE0 465 aaKnown RBP13.85□□□□□ -0.19
SMURF1-203ENST00000472627 GPT2Q8TD30 523 aa13.85□□□□□ -0.19
SMURF1-203ENST00000472627 GDPD2Q9HCC8 539 aa13.85□□□□□ -0.19
SMURF1-203ENST00000472627 SLC5A6Q9Y289 635 aa13.85□□□□□ -0.19
SMURF1-203ENST00000472627 LRBAP50851 2863 aa13.85□□□□□ -0.19
SMURF1-203ENST00000472627 FAM170AA1A519 330 aa13.84□□□□□ -0.19
SMURF1-203ENST00000472627 OR5K4A6NMS3 321 aa13.84□□□□□ -0.19
SMURF1-203ENST00000472627 J3KR12 359 aa13.84□□□□□ -0.19
SMURF1-203ENST00000472627 SOCS5O75159 536 aa13.84□□□□□ -0.19
SMURF1-203ENST00000472627 DNAJB5O75953 348 aa13.84□□□□□ -0.19
SMURF1-203ENST00000472627 KRT38O76015 456 aa13.84□□□□□ -0.19
SMURF1-203ENST00000472627 KIAA0754O94854 1291 aa13.84□□□□□ -0.19
SMURF1-203ENST00000472627 HEXIM1O94992 359 aaKnown RBP13.84□□□□□ -0.19
SMURF1-203ENST00000472627 CPP00450 1065 aa13.84□□□□□ -0.19
SMURF1-203ENST00000472627 FURINP09958 794 aa13.84□□□□□ -0.19
SMURF1-203ENST00000472627 KRT3P12035 628 aa13.84□□□□□ -0.19
SMURF1-203ENST00000472627 PRKCSHP14314 528 aaPredicted RBP13.84□□□□□ -0.19
SMURF1-203ENST00000472627 GPD1P21695 349 aa13.84□□□□□ -0.19
SMURF1-203ENST00000472627 ETV3P41162 512 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms