RNA–Protein interactions for RNA: ENST00000472559.5

UQCC1-215, Transcript of ubiquinol-cytochrome c reductase complex assembly factor 1, human

TSL 1 (best)

Gene UQCC1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UQCC1-215	ENST00000472559	ATP5C1	P36542	298 aa	Known RBP	13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	ZNF140	P52738	457 aa	Predicted RBP	13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	PKNOX1	P55347	436 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	HPCA	P84074	193 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	GALNT1	Q10472	559 aa	Predicted RBP	13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	MAP7	Q14244	749 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	RFTN1	Q14699	578 aa	Predicted RBP	13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	OR4D1	Q15615	310 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	PPP1R3A	Q16821	1122 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	ZNF678	Q5SXM1	525 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	FAM126B	Q8IXS8	530 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	FBXO22	Q8NEZ5	403 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	WBP2	Q969T9	261 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	CDKN2AIPNL	Q96HQ2	116 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	ABHD8	Q96I13	439 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	SMIM14	Q96QK8	99 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	NR1H4	Q96RI1	486 aa	Predicted RBP	13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	VN1R3	Q9BXE9	311 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	WDR41	Q9HAD4	459 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	EML4	Q9HC35	981 aa	Known RBP	13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	TRAF6	Q9Y4K3	522 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	BPTF	Q12830	3046 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	TRIM43B	A6NCK2	446 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	ZNF840P	A6NDX5	716 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	CASQ2	O14958	399 aa	Predicted RBP	13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	CFLAR	O15519	480 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	PRL	P01236	227 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	SERPINF2	P08697	491 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	CR2	P20023	1033 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	OGN	P20774	298 aa	Known RBP	13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	CDH4	P55283	916 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	NFKB2	Q00653	900 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	MS4A2	Q01362	244 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	PTK2B	Q14289	1009 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	CYTH1	Q15438	398 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	TYSND1	Q2T9J0	566 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	TMEM259	Q4ZIN3	620 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	SETMAR	Q53H47	684 aa	Predicted RBP	13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	GET4	Q7L5D6	327 aa	Predicted RBP	13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	OR4L1	Q8NH43	312 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	GDPD5	Q8WTR4	605 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	SEPT8	Q92599	483 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	USP13	Q92995	863 aa	Predicted RBP	13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	AARSD1	Q9BTE6	412 aa	Known RBP	13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	SPON2	Q9BUD6	331 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	EBF3	Q9H4W6	596 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	EFCAB1	Q9HAE3	211 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	CATSPERZ	Q9NTU4	200 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	NLE1	Q9NVX2	485 aa	Predicted RBP	13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	UBA2	Q9UBT2	640 aa	Predicted RBP	13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	SEPT3	Q9UH03	358 aa		13.15	□□□□□ -0.3
UQCC1-215	ENST00000472559	LRRC14B	A6NHZ5	514 aa		13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559		H3BMM5	538 aa		13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	FBP2	O00757	339 aa		13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	COCH	O43405	550 aa		13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	SUPT3H	O75486	399 aa		13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	SEC24A	O95486	1093 aa		13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	F11	P03951	625 aa		13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	HMGA1	P17096	107 aa	Known RBP	13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	FUT4	P22083	530 aa		13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	PSMA3	P25788	255 aa		13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	PEX2	P28328	305 aa		13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	MSX2	P35548	267 aa	Predicted RBP	13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	NOG	Q13253	232 aa		13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	BFSP2	Q13515	415 aa		13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	UGT3A2	Q3SY77	523 aa		13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	IL31	Q6EBC2	164 aa		13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	CLEC6A	Q6EIG7	209 aa		13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	MRNIP	Q6NTE8	343 aa		13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	DUS1L	Q6P1R4	473 aa	Known RBP	13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	TMEM53	Q6P2H8	277 aa		13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	DENND1C	Q8IV53	801 aa		13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	PSKH2	Q96QS6	385 aa		13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	SERPINI1	Q99574	410 aa		13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	POPDC3	Q9HBV1	291 aa		13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	HMX1	Q9NP08	348 aa	Predicted RBP	13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	MTRR	Q9UBK8	725 aa		13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	IKZF3	Q9UKT9	509 aa		13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	MED16	Q9Y2X0	877 aa		13.14	□□□□□ -0.31
UQCC1-215	ENST00000472559	MTHFD2	P13995	350 aa		13.13	□□□□□ -0.31
UQCC1-215	ENST00000472559	POR	P16435	677 aa	Predicted RBP	13.13	□□□□□ -0.31
UQCC1-215	ENST00000472559	SLC11A2	P49281	568 aa		13.13	□□□□□ -0.31
UQCC1-215	ENST00000472559	STC1	P52823	247 aa		13.13	□□□□□ -0.31
UQCC1-215	ENST00000472559	ART3	Q13508	389 aa		13.13	□□□□□ -0.31
UQCC1-215	ENST00000472559	SQLE	Q14534	574 aa		13.13	□□□□□ -0.31
UQCC1-215	ENST00000472559	LRRC36	Q1X8D7	754 aa		13.13	□□□□□ -0.31
UQCC1-215	ENST00000472559	MAP7D1	Q3KQU3	841 aa		13.13	□□□□□ -0.31
UQCC1-215	ENST00000472559	SLC8B1	Q6J4K2	584 aa		13.13	□□□□□ -0.31
UQCC1-215	ENST00000472559	PTGR2	Q8N8N7	351 aa	Predicted RBP	13.13	□□□□□ -0.31
UQCC1-215	ENST00000472559	MDGA1	Q8NFP4	955 aa		13.13	□□□□□ -0.31
UQCC1-215	ENST00000472559	TUBGCP5	Q96RT8	1024 aa		13.13	□□□□□ -0.31
UQCC1-215	ENST00000472559	ZBED2	Q9BTP6	218 aa		13.13	□□□□□ -0.31
UQCC1-215	ENST00000472559	TRMO	Q9BU70	441 aa		13.13	□□□□□ -0.31
UQCC1-215	ENST00000472559	CINP	Q9BW66	212 aa	Predicted RBP	13.13	□□□□□ -0.31
UQCC1-215	ENST00000472559	KLHL4	Q9C0H6	718 aa		13.13	□□□□□ -0.31
UQCC1-215	ENST00000472559	RETREG1	Q9H6L5	497 aa		13.13	□□□□□ -0.31
UQCC1-215	ENST00000472559	GKN1	Q9NS71	199 aa		13.13	□□□□□ -0.31
UQCC1-215	ENST00000472559	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.13	□□□□□ -0.31
UQCC1-215	ENST00000472559	PSMD13	Q9UNM6	376 aa		13.13	□□□□□ -0.31
UQCC1-215	ENST00000472559	GBF1	Q92538	1859 aa		13.13	□□□□□ -0.31

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