RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 TNFAIP1Q13829 316 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 MYBPC2Q14324 1141 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 ZNF284Q2VY69 593 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 RARS2Q5T160 578 aaKnown RBP4.11□□□□□ -1.75
PRPF3-204ENST00000470824 OTUD1Q5VV17 481 aaPredicted RBP4.11□□□□□ -1.75
PRPF3-204ENST00000470824 ANKRD54Q6NXT1 300 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 RPUSD3Q6P087 351 aaKnown RBP4.11□□□□□ -1.75
PRPF3-204ENST00000470824 SYCE2Q6PIF2 218 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 Q6ZTK2 550 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 SHFQ7M4L6 423 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 CTU1Q7Z7A3 348 aaKnown RBP4.11□□□□□ -1.75
PRPF3-204ENST00000470824 KBTBD6Q86V97 674 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 EPHX4Q8IUS5 362 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 ARID3BQ8IVW6 561 aaPredicted RBP4.11□□□□□ -1.75
PRPF3-204ENST00000470824 MCEMP1Q8IX19 187 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 DNAJC10Q8IXB1 793 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 DENND1AQ8TEH3 1009 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 NSMCE1Q8WV22 266 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 SLC25A28Q96A46 364 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 CNDP2Q96KP4 475 aaKnown RBP4.11□□□□□ -1.75
PRPF3-204ENST00000470824 APOLD1Q96LR9 279 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 NUDCD1Q96RS6 583 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 FIZ1Q96SL8 496 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 GAD1Q99259 594 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 TMEM79Q9BSE2 394 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 KIFC3Q9BVG8 833 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 ESRP2Q9H6T0 727 aaKnown RBP4.11□□□□□ -1.75
PRPF3-204ENST00000470824 CLK4Q9HAZ1 481 aaKnown RBP4.11□□□□□ -1.75
PRPF3-204ENST00000470824 LTB4R2Q9NPC1 389 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 PSD3Q9NYI0 1048 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 TAB2Q9NYJ8 693 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 C11orf21Q9P2W6 132 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 UBA2Q9UBT2 640 aaPredicted RBP4.11□□□□□ -1.75
PRPF3-204ENST00000470824 FBXW11Q9UKB1 542 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 PPIEQ9UNP9 301 aaKnown RBP4.11□□□□□ -1.75
PRPF3-204ENST00000470824 ATAD2BQ9ULI0 1458 aa4.11□□□□□ -1.75
PRPF3-204ENST00000470824 LAMC3Q9Y6N6 1575 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 A0A1B0GVM2 712 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 H0YGN5 161 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 I6L893 689 aaPredicted RBP4.1□□□□□ -1.75
PRPF3-204ENST00000470824 VWA5AO00534 786 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 ATP2A1O14983 1001 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 ASAP2O43150 1006 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 PAPSS1O43252 624 aaPredicted RBP4.1□□□□□ -1.75
PRPF3-204ENST00000470824 PPFIA2O75334 1257 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 AVILO75366 819 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 VNN2O95498 520 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 APOA4P06727 396 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 CYC1P08574 325 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 TMEM191BP0C7N4 346 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 NAGAP17050 411 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 UBA1P22314 1058 aaKnown RBP4.1□□□□□ -1.75
PRPF3-204ENST00000470824 ACADLP28330 430 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 CDC16Q13042 620 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 BAATQ14032 418 aaPredicted RBP4.1□□□□□ -1.75
PRPF3-204ENST00000470824 PSMD6Q15008 389 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 SMN1Q16637 294 aaKnown RBP4.1□□□□□ -1.75
PRPF3-204ENST00000470824 PNLIPRP3Q17RR3 467 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 PRTGQ2VWP7 1150 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 KRT79Q5XKE5 535 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 Q6ZSV7 163 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 KRT77Q7Z794 578 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 SRRM1Q8IYB3 904 aaKnown RBP4.1□□□□□ -1.75
PRPF3-204ENST00000470824 MIGA1Q8NAN2 632 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 POGLUT1Q8NBL1 392 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 MCUQ8NE86 351 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 ZNF548Q8NEK5 533 aaPredicted RBP4.1□□□□□ -1.75
PRPF3-204ENST00000470824 RADILQ96JH8 1075 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 CRAMP1Q96RY5 1269 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 PAFAH2Q99487 392 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 MMTAG2Q9BU76 263 aaKnown RBP4.1□□□□□ -1.75
PRPF3-204ENST00000470824 KLHL4Q9C0H6 718 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 PPP1R3EQ9H7J1 279 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 MTMR10Q9NXD2 777 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 WSB2Q9NYS7 404 aaPredicted RBP4.1□□□□□ -1.75
PRPF3-204ENST00000470824 TTC7AQ9ULT0 858 aaPredicted RBP4.1□□□□□ -1.75
PRPF3-204ENST00000470824 FRMD4BQ9Y2L6 1034 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 ZNF711Q9Y462 761 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 CLIC4Q9Y696 253 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 NCAPD3P42695 1498 aa4.1□□□□□ -1.75
PRPF3-204ENST00000470824 hCG_1809904A0A1W2PP81 198 aa4.09□□□□□ -1.75
PRPF3-204ENST00000470824 A0A1W2PPE2 198 aa4.09□□□□□ -1.75
PRPF3-204ENST00000470824 RPS10-NUDT3A0A1W2PQS6 291 aa4.09□□□□□ -1.75
PRPF3-204ENST00000470824 A0A1W2PR64 198 aa4.09□□□□□ -1.75
PRPF3-204ENST00000470824 KANSL1LA0AUZ9 987 aa4.09□□□□□ -1.75
PRPF3-204ENST00000470824 H7C0S8 307 aa4.09□□□□□ -1.75
PRPF3-204ENST00000470824 ADAMDEC1O15204 470 aa4.09□□□□□ -1.75
PRPF3-204ENST00000470824 HSPA12AO43301 675 aa4.09□□□□□ -1.75
PRPF3-204ENST00000470824 ZIC3O60481 467 aa4.09□□□□□ -1.75
PRPF3-204ENST00000470824 G6PDP11413 515 aa4.09□□□□□ -1.75
PRPF3-204ENST00000470824 HNRNPH1P31943 449 aaKnown RBP4.09□□□□□ -1.75
PRPF3-204ENST00000470824 COMPP49747 757 aaPredicted RBP4.09□□□□□ -1.75
PRPF3-204ENST00000470824 LIG4P49917 911 aa4.09□□□□□ -1.75
PRPF3-204ENST00000470824 GPR143P51810 404 aa4.09□□□□□ -1.75
PRPF3-204ENST00000470824 UBXN2AP68543 259 aa4.09□□□□□ -1.75
PRPF3-204ENST00000470824 GRSF1Q12849 480 aaKnown RBP eCLIP4.09□□□□□ -1.75
PRPF3-204ENST00000470824 CTTNQ14247 550 aaKnown RBP4.09□□□□□ -1.75
PRPF3-204ENST00000470824 RABEP1Q15276 862 aa4.09□□□□□ -1.75
PRPF3-204ENST00000470824 ZNF805Q5CZA5 627 aa4.09□□□□□ -1.75
PRPF3-204ENST00000470824 IGSF11Q5DX21 431 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms