RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 DEPDC1BQ8WUY9 529 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 JADE3Q92613 823 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 TANKQ92844 425 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 VCPIP1Q96JH7 1222 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 PPP1R2P1Q96PQ5 205 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 SP110Q9HB58 689 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 INTS7Q9NVH2 962 aaKnown RBP9.95□□□□□ -0.82
NUP50-214ENST00000469163 CDH7Q9ULB5 785 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 DGKBQ9Y6T7 804 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 PRSS44E7EML9 344 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 TOR1AO14656 332 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 GREM1O60565 184 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 ADAMTS4O75173 837 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 CLPXO76031 633 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 ZSCAN5DPP0CG00 497 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 ATXN3P54252 364 aaPredicted RBP9.95□□□□□ -0.82
NUP50-214ENST00000469163 SRP54P61011 504 aaKnown RBP9.95□□□□□ -0.82
NUP50-214ENST00000469163 PLIN5Q00G26 463 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 RAD51Q06609 339 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 DHX34Q14147 1143 aaKnown RBP9.95□□□□□ -0.82
NUP50-214ENST00000469163 NEDD8Q15843 81 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 SOWAHAQ2M3V2 549 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 FIGNQ5HY92 759 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 RALGPS1Q5JS13 557 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 C6orf10Q5SRN2 563 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 SLX4IPQ5VYV7 408 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 AGMOQ6ZNB7 445 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 MCOLN2Q8IZK6 566 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 SMG8Q8ND04 991 aaKnown RBP9.95□□□□□ -0.82
NUP50-214ENST00000469163 RXFP2Q8WXD0 754 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 TMEM169Q96HH4 297 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 SCYL1Q96KG9 808 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 TDRD1Q9BXT4 1180 aaKnown RBP9.95□□□□□ -0.82
NUP50-214ENST00000469163 THG1LQ9NWX6 298 aaKnown RBP9.95□□□□□ -0.82
NUP50-214ENST00000469163 TAGLN3Q9UI15 199 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 PACSIN3Q9UKS6 424 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 SNX7Q9UNH6 387 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 ATAD5Q96QE3 1844 aa9.95□□□□□ -0.82
NUP50-214ENST00000469163 TEX51A0A1B0GUA7 166 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 M0QYT0 321 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 TOR1BO14657 336 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 RFPL2O75678 378 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 GJA1P17302 382 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 SAT1P21673 171 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 DNAJB1P25685 340 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 RPL35P42766 123 aaKnown RBP9.94□□□□□ -0.82
NUP50-214ENST00000469163 PRKAA2P54646 552 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 GHRHRQ02643 423 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 PIGZQ86VD9 579 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 GALNT11Q8NCW6 608 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 SEPT8Q92599 483 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 ACDQ96AP0 544 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 ZNF347Q96SE7 839 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 IL12RB2Q99665 862 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 TTYH2Q9BSA4 534 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 SAV1Q9H4B6 383 aaPredicted RBP9.94□□□□□ -0.82
NUP50-214ENST00000469163 MRPL47Q9HD33 250 aaKnown RBP9.94□□□□□ -0.82
NUP50-214ENST00000469163 DDIT4Q9NX09 232 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 SPATA2Q9UM82 520 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 DIMT1Q9UNQ2 313 aaKnown RBP9.94□□□□□ -0.82
NUP50-214ENST00000469163 ZNF175Q9Y473 711 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 RAD54BQ9Y620 910 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 A0A087WXM4 84 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 SPAG6O75602 509 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 BEST1O76090 585 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 TBX18O95935 607 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 PSKH1P11801 424 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 ETS1P14921 441 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 ASPAP45381 313 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 NPY2RP49146 381 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 NFATC3Q12968 1075 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 BFSP2Q13515 415 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 SGCAQ16586 387 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 CLEC16AQ2KHT3 1053 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 PM20D1Q6GTS8 502 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 TFAP2DQ7Z6R9 452 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 CACUL1Q86Y37 369 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 EID3Q8N140 333 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 RNF139Q8WU17 664 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 FBXW5Q969U6 566 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 NRBF2Q96F24 287 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 TXNDC15Q96J42 360 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 CELF6Q96J87 481 aaKnown RBP9.94□□□□□ -0.82
NUP50-214ENST00000469163 GPR88Q9GZN0 384 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 SDHAF3Q9NRP4 125 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 PARVAQ9NVD7 372 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 TMLHEQ9NVH6 421 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 UBP1Q9NZI7 540 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 CHD7Q9P2D1 2997 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 IGKV6-21A0A0C4DH24 114 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 GRXCR1A8MXD5 290 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 H0YJX3 145 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 ARVCFO00192 962 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 AREL1O15033 823 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 SHOXO15266 292 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 ST8SIA5O15466 376 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 NUPL2O15504 423 aaKnown RBP9.94□□□□□ -0.82
NUP50-214ENST00000469163 ERBB2P04626 1255 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 ATXN8OSP0DMR3 200 aa9.94□□□□□ -0.82
NUP50-214ENST00000469163 TFE3P19532 575 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms