RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 TECPR1Q7Z6L1 1165 aa21■□□□□ 0.95
COL9A3-207ENST00000467819 RCBTB1Q8NDN9 531 aa21■□□□□ 0.95
COL9A3-207ENST00000467819 SGF29Q96ES7 293 aa21■□□□□ 0.95
COL9A3-207ENST00000467819 AKAP7Q9P0M2 348 aaPredicted RBP21■□□□□ 0.95
COL9A3-207ENST00000467819 SEPT10Q9P0V9 454 aa21■□□□□ 0.95
COL9A3-207ENST00000467819 SLC17A4Q9Y2C5 497 aa21■□□□□ 0.95
COL9A3-207ENST00000467819 PLEKHM1Q9Y4G2 1056 aa21■□□□□ 0.95
COL9A3-207ENST00000467819 IVLP07476 585 aa20.99■□□□□ 0.95
COL9A3-207ENST00000467819 TEAD1P28347 426 aa20.99■□□□□ 0.95
COL9A3-207ENST00000467819 GJC1P36383 396 aa20.99■□□□□ 0.95
COL9A3-207ENST00000467819 ACTR1BP42025 376 aa20.99■□□□□ 0.95
COL9A3-207ENST00000467819 ACTR1AP61163 376 aa20.99■□□□□ 0.95
COL9A3-207ENST00000467819 IQCB1Q15051 598 aa20.99■□□□□ 0.95
COL9A3-207ENST00000467819 TRIM74Q86UV6 250 aa20.99■□□□□ 0.95
COL9A3-207ENST00000467819 NAGSQ8N159 534 aa20.99■□□□□ 0.95
COL9A3-207ENST00000467819 TEX26Q8N6G2 289 aa20.99■□□□□ 0.95
COL9A3-207ENST00000467819 SCAMP4Q969E2 229 aa20.99■□□□□ 0.95
COL9A3-207ENST00000467819 AP2M1Q96CW1 435 aa20.99■□□□□ 0.95
COL9A3-207ENST00000467819 CDH19Q9H159 772 aa20.99■□□□□ 0.95
COL9A3-207ENST00000467819 ABCG8Q9H221 673 aa20.99■□□□□ 0.95
COL9A3-207ENST00000467819 TMEM98Q9Y2Y6 226 aa20.99■□□□□ 0.95
COL9A3-207ENST00000467819 PPIL1Q9Y3C6 166 aa20.99■□□□□ 0.95
COL9A3-207ENST00000467819 TTLL3Q9Y4R7 772 aa20.99■□□□□ 0.95
COL9A3-207ENST00000467819 BOD1L1Q8NFC6 3051 aa20.98■□□□□ 0.95
COL9A3-207ENST00000467819 MYO18BQ8IUG5 2567 aa20.98■□□□□ 0.95
COL9A3-207ENST00000467819 PYCARD-AS1I3L0S3 204 aa20.98■□□□□ 0.95
COL9A3-207ENST00000467819 MAP3K6O95382 1288 aa20.98■□□□□ 0.95
COL9A3-207ENST00000467819 SOD1P00441 154 aa20.98■□□□□ 0.95
COL9A3-207ENST00000467819 CCL4P13236 92 aa20.98■□□□□ 0.95
COL9A3-207ENST00000467819 IL4RP24394 825 aa20.98■□□□□ 0.95
COL9A3-207ENST00000467819 EPHB1P54762 984 aa20.98■□□□□ 0.95
COL9A3-207ENST00000467819 DPTQ07507 201 aa20.98■□□□□ 0.95
COL9A3-207ENST00000467819 NR1D2Q14995 579 aa20.98■□□□□ 0.95
COL9A3-207ENST00000467819 NFKBIBQ15653 356 aa20.98■□□□□ 0.95
COL9A3-207ENST00000467819 ZNF574Q6ZN55 896 aaPredicted RBP20.98■□□□□ 0.95
COL9A3-207ENST00000467819 MARK2Q7KZI7 788 aaKnown RBP20.98■□□□□ 0.95
COL9A3-207ENST00000467819 NDUFAF2Q8N183 169 aa20.98■□□□□ 0.95
COL9A3-207ENST00000467819 CCDC74BQ96LY2 380 aa20.98■□□□□ 0.95
COL9A3-207ENST00000467819 OR2M4Q96R27 311 aa20.98■□□□□ 0.95
COL9A3-207ENST00000467819 POLR1EQ9GZS1 481 aaKnown RBP20.98■□□□□ 0.95
COL9A3-207ENST00000467819 RCOR3Q9P2K3 495 aaPredicted RBP20.98■□□□□ 0.95
COL9A3-207ENST00000467819 PCDHB11Q9Y5F2 797 aa20.98■□□□□ 0.95
COL9A3-207ENST00000467819 BZW2Q9Y6E2 419 aaKnown RBP20.98■□□□□ 0.95
COL9A3-207ENST00000467819 A0A087X0T9 212 aa20.97■□□□□ 0.95
COL9A3-207ENST00000467819 IGHV5-10-1A0A0J9YXX1 117 aa20.97■□□□□ 0.95
COL9A3-207ENST00000467819 PPM1DO15297 605 aa20.97■□□□□ 0.95
COL9A3-207ENST00000467819 ZW10O43264 779 aa20.97■□□□□ 0.95
COL9A3-207ENST00000467819 FZD6O60353 706 aa20.97■□□□□ 0.95
COL9A3-207ENST00000467819 SERPING1P05155 500 aa20.97■□□□□ 0.95
COL9A3-207ENST00000467819 CYP1A2P05177 515 aa20.97■□□□□ 0.95
COL9A3-207ENST00000467819 FAM228BP0C875 321 aa20.97■□□□□ 0.95
COL9A3-207ENST00000467819 CD1CP29017 333 aa20.97■□□□□ 0.95
COL9A3-207ENST00000467819 GARSP41250 739 aaKnown RBP20.97■□□□□ 0.95
COL9A3-207ENST00000467819 DSC2Q02487 901 aa20.97■□□□□ 0.95
COL9A3-207ENST00000467819 HADHQ16836 314 aaKnown RBP20.97■□□□□ 0.95
COL9A3-207ENST00000467819 CCDC122Q5T0U0 273 aa20.97■□□□□ 0.95
COL9A3-207ENST00000467819 NKAIN2Q5VXU1 208 aa20.97■□□□□ 0.95
COL9A3-207ENST00000467819 NCBP2-AS2Q69YL0 99 aa20.97■□□□□ 0.95
COL9A3-207ENST00000467819 ADAMTSL4Q6UY14 1074 aa20.97■□□□□ 0.95
COL9A3-207ENST00000467819 LRRC49Q8IUZ0 686 aa20.97■□□□□ 0.95
COL9A3-207ENST00000467819 EXD3Q8N9H8 876 aa20.97■□□□□ 0.95
COL9A3-207ENST00000467819 CPLX3Q8WVH0 158 aa20.97■□□□□ 0.95
COL9A3-207ENST00000467819 EXTL1Q92935 676 aa20.97■□□□□ 0.95
COL9A3-207ENST00000467819 CHKBQ9Y259 395 aa20.97■□□□□ 0.95
COL9A3-207ENST00000467819 TLN1Q9Y490 2541 aaKnown RBP20.97■□□□□ 0.95
COL9A3-207ENST00000467819 SPTA1P02549 2419 aa20.96■□□□□ 0.95
COL9A3-207ENST00000467819 A0A0J9YYE9 177 aa20.96■□□□□ 0.95
COL9A3-207ENST00000467819 A0A1W2PQJ5 194 aa20.96■□□□□ 0.95
COL9A3-207ENST00000467819 MYO1FO00160 1098 aa20.96■□□□□ 0.95
COL9A3-207ENST00000467819 INPP4BO15327 924 aa20.96■□□□□ 0.95
COL9A3-207ENST00000467819 TRBC1P01850 177 aa20.96■□□□□ 0.95
COL9A3-207ENST00000467819 GPR3P46089 330 aa20.96■□□□□ 0.95
COL9A3-207ENST00000467819 FANCCQ00597 558 aa20.96■□□□□ 0.95
COL9A3-207ENST00000467819 PTSQ03393 145 aa20.96■□□□□ 0.95
COL9A3-207ENST00000467819 GALNT2Q10471 571 aa20.96■□□□□ 0.95
COL9A3-207ENST00000467819 PEX6Q13608 980 aa20.96■□□□□ 0.95
COL9A3-207ENST00000467819 DPYSL3Q14195 570 aa20.96■□□□□ 0.95
COL9A3-207ENST00000467819 LINC00303Q3SY05 128 aa20.96■□□□□ 0.95
COL9A3-207ENST00000467819 ATP13A4Q4VNC1 1196 aa20.96■□□□□ 0.95
COL9A3-207ENST00000467819 TMEM164Q5U3C3 297 aa20.96■□□□□ 0.95
COL9A3-207ENST00000467819 CPNE8Q86YQ8 564 aa20.96■□□□□ 0.95
COL9A3-207ENST00000467819 JPH3Q8WXH2 748 aaPredicted RBP20.96■□□□□ 0.95
COL9A3-207ENST00000467819 SYN2Q92777 582 aaPredicted RBP20.96■□□□□ 0.95
COL9A3-207ENST00000467819 SCARF2Q96GP6 870 aaPredicted RBP20.96■□□□□ 0.95
COL9A3-207ENST00000467819 AGAP2Q99490 1192 aa20.96■□□□□ 0.95
COL9A3-207ENST00000467819 ARHGAP9Q9BRR9 750 aa20.96■□□□□ 0.95
COL9A3-207ENST00000467819 ZMYND15Q9H091 742 aa20.96■□□□□ 0.95
COL9A3-207ENST00000467819 PCDHGA4Q9Y5G9 962 aa20.96■□□□□ 0.95
COL9A3-207ENST00000467819 HGSO14964 777 aaPredicted RBP20.95■□□□□ 0.94
COL9A3-207ENST00000467819 SLC28A2O43868 658 aa20.95■□□□□ 0.94
COL9A3-207ENST00000467819 ZNF30P17039 623 aa20.95■□□□□ 0.94
COL9A3-207ENST00000467819 WT1P19544 449 aaPredicted RBP20.95■□□□□ 0.94
COL9A3-207ENST00000467819 MPSTP25325 297 aa20.95■□□□□ 0.94
COL9A3-207ENST00000467819 CD82P27701 267 aa20.95■□□□□ 0.94
COL9A3-207ENST00000467819 PBX1P40424 430 aa20.95■□□□□ 0.94
COL9A3-207ENST00000467819 PPM1FP49593 454 aaPredicted RBP20.95■□□□□ 0.94
COL9A3-207ENST00000467819 STC1P52823 247 aa20.95■□□□□ 0.94
COL9A3-207ENST00000467819 LIMK2P53671 638 aa20.95■□□□□ 0.94
COL9A3-207ENST00000467819 NFATC3Q12968 1075 aa20.95■□□□□ 0.94
COL9A3-207ENST00000467819 IHHQ14623 411 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms