RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 STN1Q9H668 368 aaKnown RBP2.16□□□□□ -2.06
CCDC93-205ENST00000466171 UPF2Q9HAU5 1272 aaKnown RBP2.16□□□□□ -2.06
CCDC93-205ENST00000466171 UBN1Q9NPG3 1134 aa2.16□□□□□ -2.06
CCDC93-205ENST00000466171 CNGB3Q9NQW8 809 aa2.16□□□□□ -2.06
CCDC93-205ENST00000466171 SMYD2Q9NRG4 433 aa2.16□□□□□ -2.06
CCDC93-205ENST00000466171 MAP3K20Q9NYL2 800 aaKnown RBP2.16□□□□□ -2.06
CCDC93-205ENST00000466171 CISD1Q9NZ45 108 aaKnown RBP2.16□□□□□ -2.06
CCDC93-205ENST00000466171 HDAC6Q9UBN7 1215 aa2.16□□□□□ -2.06
CCDC93-205ENST00000466171 PGAP2Q9UHJ9 254 aa2.16□□□□□ -2.06
CCDC93-205ENST00000466171 SLC13A4Q9UKG4 626 aa2.16□□□□□ -2.06
CCDC93-205ENST00000466171 PADI1Q9ULC6 663 aa2.16□□□□□ -2.06
CCDC93-205ENST00000466171 HSF4Q9ULV5 492 aa2.16□□□□□ -2.06
CCDC93-205ENST00000466171 HHLA1C9JL84 531 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 WDR1O75083 606 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 CRLF1O75462 422 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 IGLV1-44P01699 117 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 CD4P01730 458 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 CHRM4P08173 479 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 PATE4P0C8F1 98 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 CD72P21854 359 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 SP100P23497 879 aaPredicted RBP2.15□□□□□ -2.07
CCDC93-205ENST00000466171 RYKP34925 604 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 GGT5P36269 586 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 PAFAH1B1P43034 410 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 MMP14P50281 582 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 CSRP3P50461 194 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 RAD23BP54727 409 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 NR1H2P55055 460 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 CASP6P55212 293 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 GEMIN4P57678 1058 aaKnown RBP2.15□□□□□ -2.07
CCDC93-205ENST00000466171 RPP30P78346 268 aaKnown RBP2.15□□□□□ -2.07
CCDC93-205ENST00000466171 IRX1P78414 480 aaPredicted RBP2.15□□□□□ -2.07
CCDC93-205ENST00000466171 MPP1Q00013 466 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.15□□□□□ -2.07
CCDC93-205ENST00000466171 GALNT2Q10471 571 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 GAGE5Q13069 117 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 GAGE6Q13070 117 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 NAA25Q14CX7 972 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 GPR68Q15743 365 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 KRT24Q2M2I5 525 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 FBXO43Q4G163 708 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 TCTE1Q5JU00 501 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 GPATCH4Q5T3I0 446 aaKnown RBP2.15□□□□□ -2.07
CCDC93-205ENST00000466171 FAM69AQ5T7M9 428 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 FAAH2Q6GMR7 532 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 FAM180BQ6P0A1 224 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 DENND1BQ6P3S1 775 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 WDR63Q8IWG1 891 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 USP38Q8NB14 1042 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 AGBL3Q8NEM8 1001 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 KLHDC9Q8NEP7 349 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 SLC20A1Q8WUM9 679 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 UCMAQ8WVF2 138 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 RUFY2Q8WXA3 655 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 TM9SF4Q92544 642 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 SKA1Q96BD8 255 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 ZNF524Q96C55 264 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 RNFT2Q96EX2 444 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 STAMBPL1Q96FJ0 436 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 APOPT1Q96IL0 206 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 ZNF354BQ96LW1 612 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 ATOH8Q96SQ7 321 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 CSTL1Q9H114 145 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 WDR13Q9H1Z4 485 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 TAOK3Q9H2K8 898 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 TTYH1Q9H313 450 aaPredicted RBP2.15□□□□□ -2.07
CCDC93-205ENST00000466171 MROH8Q9H579 483 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 PREBQ9HCU5 417 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 RASSF1Q9NS23 344 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 TMEM30AQ9NV96 361 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 HCFC1R1Q9NWW0 138 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 ALKBH4Q9NXW9 302 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 ZNF69Q9UC07 566 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 CNOT7Q9UIV1 285 aaKnown RBP2.15□□□□□ -2.07
CCDC93-205ENST00000466171 CD207Q9UJ71 328 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 RCOR1Q9UKL0 485 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 GJD2Q9UKL4 321 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 GDAQ9Y2T3 454 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 NFE2L3Q9Y4A8 694 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 A3GALT2U3KPV4 340 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 CACNA1FO60840 1977 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 TAF1P21675 1872 aa2.15□□□□□ -2.07
CCDC93-205ENST00000466171 A0A0G2JLW4 131 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 A0A0U1RQF3 1178 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 CCDC196A0A1B0GTZ2 297 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 SH2D7A6NKC9 451 aaPredicted RBP2.14□□□□□ -2.07
CCDC93-205ENST00000466171 HSPB2A8KAH6 182 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 SMIM1B2RUZ4 78 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 KLRF2D3W0D1 207 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 PSMD14O00487 310 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 TBX18O95935 607 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 SLC2A4P14672 509 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 DDX5P17844 614 aaKnown RBP2.14□□□□□ -2.07
CCDC93-205ENST00000466171 DDIT3P35638 169 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 PSMC2P35998 433 aaKnown RBP2.14□□□□□ -2.07
CCDC93-205ENST00000466171 EFNA5P52803 228 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 CDH15P55291 814 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 LMO4P61968 165 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 VAMP2P63027 116 aa2.14□□□□□ -2.07
CCDC93-205ENST00000466171 PDE1BQ01064 536 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms