RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 SH2D4AQ9H788 454 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 POLR1BQ9H9Y6 1135 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 C17orf75Q9HAS0 396 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 GPR108Q9NPR9 543 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 RRP7BPQ9NSQ0 103 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 CORO1CQ9ULV4 474 aaPredicted RBP4.32□□□□□ -1.72
LRCH3-211ENST00000466054 MAU2Q9Y6X3 613 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 EVPLQ92817 2033 aa4.32□□□□□ -1.72
LRCH3-211ENST00000466054 A0A087WYN8 130 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 FSD2A1L4K1 749 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 MYO1GB0I1T2 1018 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 DAB1O75553 588 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 NKX2-2O95096 273 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 PAPSS2O95340 614 aaPredicted RBP4.31□□□□□ -1.72
LRCH3-211ENST00000466054 FTCDO95954 541 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 PLGP00747 810 aaPredicted RBP4.31□□□□□ -1.72
LRCH3-211ENST00000466054 IGHV4-30-4P0DP06 118 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 RRM1P23921 792 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 HOXC9P31274 260 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 PPARGP37231 505 aaPredicted RBP4.31□□□□□ -1.72
LRCH3-211ENST00000466054 TFAP4Q01664 338 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 PLCB4Q15147 1175 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 EFNB3Q15768 340 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 FAM69BQ5VUD6 431 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 NADSYN1Q6IA69 706 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 KLHL35Q6PF15 583 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 GLDNQ6ZMI3 551 aaPredicted RBP4.31□□□□□ -1.72
LRCH3-211ENST00000466054 PQLC2Q6ZP29 291 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 TAOK1Q7L7X3 1001 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 CACNA2D4Q7Z3S7 1137 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 HAPLN4Q86UW8 402 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 TICAM1Q8IUC6 712 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 RNF168Q8IYW5 571 aaPredicted RBP4.31□□□□□ -1.72
LRCH3-211ENST00000466054 DSELQ8IZU8 1212 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 MAGEC3Q8TD91 643 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 RRNAD1Q96FB5 475 aaKnown RBP4.31□□□□□ -1.72
LRCH3-211ENST00000466054 WDFY2Q96P53 400 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 SEPT5Q99719 369 aaPredicted RBP4.31□□□□□ -1.72
LRCH3-211ENST00000466054 NCAPGQ9BPX3 1015 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 HAUS8Q9BT25 410 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 SYNCQ9H7C4 482 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 KAT14Q9H8E8 782 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 RANGRFQ9HD47 186 aaPredicted RBP4.31□□□□□ -1.72
LRCH3-211ENST00000466054 LTB4R2Q9NPC1 389 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 CNGB3Q9NQW8 809 aa4.31□□□□□ -1.72
LRCH3-211ENST00000466054 CNOT8Q9UFF9 292 aaKnown RBP4.31□□□□□ -1.72
LRCH3-211ENST00000466054 TTC7AQ9ULT0 858 aaPredicted RBP4.31□□□□□ -1.72
LRCH3-211ENST00000466054 IGLV5-52A0A0A0MRZ9 124 aa4.3□□□□□ -1.72
LRCH3-211ENST00000466054 GOLGA6L9A6NEM1 432 aa4.3□□□□□ -1.72
LRCH3-211ENST00000466054 A8MZ25 164 aa4.3□□□□□ -1.72
LRCH3-211ENST00000466054 CYC1P08574 325 aa4.3□□□□□ -1.72
LRCH3-211ENST00000466054 IL7RP16871 459 aa4.3□□□□□ -1.72
LRCH3-211ENST00000466054 MAPK4P31152 587 aa4.3□□□□□ -1.72
LRCH3-211ENST00000466054 HOXA11P31270 313 aaPredicted RBP4.3□□□□□ -1.72
LRCH3-211ENST00000466054 PSMB10P40306 273 aa4.3□□□□□ -1.72
LRCH3-211ENST00000466054 DRG2P55039 364 aaKnown RBP4.3□□□□□ -1.72
LRCH3-211ENST00000466054 LTBQ06643 244 aa4.3□□□□□ -1.72
LRCH3-211ENST00000466054 AIMP2Q13155 320 aaKnown RBP4.3□□□□□ -1.72
LRCH3-211ENST00000466054 AMZ1Q400G9 498 aa4.3□□□□□ -1.72
LRCH3-211ENST00000466054 SPATA1Q5VX52 437 aa4.3□□□□□ -1.72
LRCH3-211ENST00000466054 ITPRIPL1Q6GPH6 555 aa4.3□□□□□ -1.72
LRCH3-211ENST00000466054 SIGIRRQ6IA17 410 aa4.3□□□□□ -1.72
LRCH3-211ENST00000466054 B3GNT6Q6ZMB0 384 aa4.3□□□□□ -1.72
LRCH3-211ENST00000466054 SEPT14Q6ZU15 432 aa4.3□□□□□ -1.72
LRCH3-211ENST00000466054 DPPA4Q7L190 304 aa4.3□□□□□ -1.72
LRCH3-211ENST00000466054 PCGF5Q86SE9 256 aa4.3□□□□□ -1.72
LRCH3-211ENST00000466054 IGSF8Q969P0 613 aa4.3□□□□□ -1.72
LRCH3-211ENST00000466054 PGAM5Q96HS1 289 aa4.3□□□□□ -1.72
LRCH3-211ENST00000466054 PPP1R13BQ96KQ4 1090 aa4.3□□□□□ -1.72
LRCH3-211ENST00000466054 C1orf74Q96LT6 269 aa4.3□□□□□ -1.72
LRCH3-211ENST00000466054 CMTM3Q96MX0 182 aa4.3□□□□□ -1.72
LRCH3-211ENST00000466054 KXD1Q9BQD3 176 aa4.3□□□□□ -1.72
LRCH3-211ENST00000466054 PCGF1Q9BSM1 259 aa4.3□□□□□ -1.72
LRCH3-211ENST00000466054 PPP1R3EQ9H7J1 279 aa4.3□□□□□ -1.72
LRCH3-211ENST00000466054 SEPT11Q9NVA2 429 aaKnown RBP4.3□□□□□ -1.72
LRCH3-211ENST00000466054 UBA2Q9UBT2 640 aaPredicted RBP4.3□□□□□ -1.72
LRCH3-211ENST00000466054 FBXO2Q9UK22 296 aaPredicted RBP4.3□□□□□ -1.72
LRCH3-211ENST00000466054 FRMD3A2A2Y4 597 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 LINC01553A4QN01 128 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 VCYO14598 125 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 AP3D1O14617 1153 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 DOK2O60496 412 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 NDUFS7O75251 213 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 JRKO75564 520 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 FCGR1AP12314 374 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 SRCP12931 536 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 RARGP13631 454 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 TMEM11P17152 192 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 HOXA13P31271 388 aaPredicted RBP4.29□□□□□ -1.72
LRCH3-211ENST00000466054 UBA7P41226 1012 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 FASLGP48023 281 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 SEC61A1P61619 476 aaKnown RBP4.29□□□□□ -1.72
LRCH3-211ENST00000466054 GRIK2Q13002 908 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 TRAF3Q13114 568 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 PRKG2Q13237 762 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 PCGF3Q3KNV8 242 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 CDONQ4KMG0 1287 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 ATP13A5Q4VNC0 1218 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 JADE1Q6IE81 842 aa4.29□□□□□ -1.72
LRCH3-211ENST00000466054 FAM122CQ6P4D5 195 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms