RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SUN1O94901 812 aa20.25■□□□□ 0.83
SKA3-205ENST00000465471 PYGLP06737 847 aa20.25■□□□□ 0.83
SKA3-205ENST00000465471 ZSCAN5DPP0CG00 497 aa20.25■□□□□ 0.83
SKA3-205ENST00000465471 MYCLP1P12525 358 aaPredicted RBP20.25■□□□□ 0.83
SKA3-205ENST00000465471 ACTN2P35609 894 aa20.25■□□□□ 0.83
SKA3-205ENST00000465471 ID4P47928 161 aa20.25■□□□□ 0.83
SKA3-205ENST00000465471 SPARCL1Q14515 664 aa20.25■□□□□ 0.83
SKA3-205ENST00000465471 HS1BP3Q53T59 392 aa20.25■□□□□ 0.83
SKA3-205ENST00000465471 RAET1GQ6H3X3 334 aa20.25■□□□□ 0.83
SKA3-205ENST00000465471 C4orf22Q6V702 233 aa20.25■□□□□ 0.83
SKA3-205ENST00000465471 HEATR4Q86WZ0 1026 aa20.25■□□□□ 0.83
SKA3-205ENST00000465471 CREG2Q8IUH2 290 aa20.25■□□□□ 0.83
SKA3-205ENST00000465471 PDCD7Q8N8D1 485 aaKnown RBP20.25■□□□□ 0.83
SKA3-205ENST00000465471 GPR26Q8NDV2 337 aa20.25■□□□□ 0.83
SKA3-205ENST00000465471 BAHD1Q8TBE0 780 aaPredicted RBP20.25■□□□□ 0.83
SKA3-205ENST00000465471 AGAP2Q99490 1192 aa20.25■□□□□ 0.83
SKA3-205ENST00000465471 RIOK2Q9BVS4 552 aaKnown RBP20.25■□□□□ 0.83
SKA3-205ENST00000465471 LGR4Q9BXB1 951 aa20.25■□□□□ 0.83
SKA3-205ENST00000465471 CAAP1Q9H8G2 361 aa20.25■□□□□ 0.83
SKA3-205ENST00000465471 ETNK1Q9HBU6 452 aa20.25■□□□□ 0.83
SKA3-205ENST00000465471 SAR1BQ9Y6B6 198 aa20.25■□□□□ 0.83
SKA3-205ENST00000465471 COL5A1P20908 1838 aaPredicted RBP20.25■□□□□ 0.83
SKA3-205ENST00000465471 CBFA2T3O75081 653 aa20.24■□□□□ 0.83
SKA3-205ENST00000465471 PHF2O75151 1096 aa20.24■□□□□ 0.83
SKA3-205ENST00000465471 PIAS2O75928 621 aa20.24■□□□□ 0.83
SKA3-205ENST00000465471 HTR1BP28222 390 aa20.24■□□□□ 0.83
SKA3-205ENST00000465471 COILP38432 576 aaPredicted RBP20.24■□□□□ 0.83
SKA3-205ENST00000465471 ETF1P62495 437 aaKnown RBP20.24■□□□□ 0.83
SKA3-205ENST00000465471 CDK3Q00526 305 aa20.24■□□□□ 0.83
SKA3-205ENST00000465471 BNIP3Q12983 259 aa20.24■□□□□ 0.83
SKA3-205ENST00000465471 GLT6D1Q7Z4J2 308 aa20.24■□□□□ 0.83
SKA3-205ENST00000465471 NAXDQ8IW45 347 aa20.24■□□□□ 0.83
SKA3-205ENST00000465471 ATL2Q8NHH9 583 aa20.24■□□□□ 0.83
SKA3-205ENST00000465471 BLOC1S5Q8TDH9 187 aa20.24■□□□□ 0.83
SKA3-205ENST00000465471 MAGOHBQ96A72 148 aaKnown RBP20.24■□□□□ 0.83
SKA3-205ENST00000465471 LRRC45Q96CN5 670 aa20.24■□□□□ 0.83
SKA3-205ENST00000465471 TBATAQ96M53 351 aa20.24■□□□□ 0.83
SKA3-205ENST00000465471 WDR92Q96MX6 357 aa20.24■□□□□ 0.83
SKA3-205ENST00000465471 FAM83DQ9H4H8 585 aa20.24■□□□□ 0.83
SKA3-205ENST00000465471 RAD18Q9NS91 495 aa20.24■□□□□ 0.83
SKA3-205ENST00000465471 DNAJC28Q9NX36 388 aa20.24■□□□□ 0.83
SKA3-205ENST00000465471 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.24■□□□□ 0.83
SKA3-205ENST00000465471 IL17CQ9P0M4 197 aa20.24■□□□□ 0.83
SKA3-205ENST00000465471 CNOT1A5YKK6 2376 aaKnown RBP20.24■□□□□ 0.83
SKA3-205ENST00000465471 ARID1BQ8NFD5 2236 aaPredicted RBP20.23■□□□□ 0.83
SKA3-205ENST00000465471 TMEM202A6NGA9 273 aa20.23■□□□□ 0.83
SKA3-205ENST00000465471 CACNB4O00305 520 aaPredicted RBP20.23■□□□□ 0.83
SKA3-205ENST00000465471 TNFRSF10CO14798 259 aa20.23■□□□□ 0.83
SKA3-205ENST00000465471 SH3BP5O60239 455 aa20.23■□□□□ 0.83
SKA3-205ENST00000465471 BPIP17213 487 aa20.23■□□□□ 0.83
SKA3-205ENST00000465471 GPR1P46091 355 aa20.23■□□□□ 0.83
SKA3-205ENST00000465471 FNTAP49354 379 aa20.23■□□□□ 0.83
SKA3-205ENST00000465471 HNRNPKP61978 463 aaKnown RBP eCLIP20.23■□□□□ 0.83
SKA3-205ENST00000465471 SUZ12Q15022 739 aaKnown RBP20.23■□□□□ 0.83
SKA3-205ENST00000465471 ALG11Q2TAA5 492 aa20.23■□□□□ 0.83
SKA3-205ENST00000465471 ZNF542PQ5EBM4 170 aa20.23■□□□□ 0.83
SKA3-205ENST00000465471 KCTD16Q68DU8 428 aa20.23■□□□□ 0.83
SKA3-205ENST00000465471 NYAP1Q6ZVC0 841 aa20.23■□□□□ 0.83
SKA3-205ENST00000465471 GATAD2AQ86YP4 633 aa20.23■□□□□ 0.83
SKA3-205ENST00000465471 TAB3Q8N5C8 712 aaPredicted RBP20.23■□□□□ 0.83
SKA3-205ENST00000465471 DTX3LQ8TDB6 740 aa20.23■□□□□ 0.83
SKA3-205ENST00000465471 COX14Q96I36 57 aa20.23■□□□□ 0.83
SKA3-205ENST00000465471 PLEKHG4BQ96PX9 1271 aa20.23■□□□□ 0.83
SKA3-205ENST00000465471 FRMD8Q9BZ67 464 aaPredicted RBP20.23■□□□□ 0.83
SKA3-205ENST00000465471 RAB6BQ9NRW1 208 aa20.23■□□□□ 0.83
SKA3-205ENST00000465471 PHPT1Q9NRX4 125 aaPredicted RBP20.23■□□□□ 0.83
SKA3-205ENST00000465471 PCOLCE2Q9UKZ9 415 aa20.23■□□□□ 0.83
SKA3-205ENST00000465471 BTBD3Q9Y2F9 522 aa20.23■□□□□ 0.83
SKA3-205ENST00000465471 NEU2Q9Y3R4 380 aa20.23■□□□□ 0.83
SKA3-205ENST00000465471 CACNA1AO00555 2505 aa20.23■□□□□ 0.83
SKA3-205ENST00000465471 TDRD6O60522 2096 aaKnown RBP20.23■□□□□ 0.83
SKA3-205ENST00000465471 PCNX2A6NKB5 2137 aa20.22■□□□□ 0.83
SKA3-205ENST00000465471 FADS2P1A8MWK0 482 aa20.22■□□□□ 0.83
SKA3-205ENST00000465471 SLC4A1P02730 911 aa20.22■□□□□ 0.83
SKA3-205ENST00000465471 KELP23276 732 aa20.22■□□□□ 0.83
SKA3-205ENST00000465471 DGKAP23743 735 aa20.22■□□□□ 0.83
SKA3-205ENST00000465471 GRK6P43250 576 aa20.22■□□□□ 0.83
SKA3-205ENST00000465471 TAF1AQ15573 450 aaPredicted RBP20.22■□□□□ 0.83
SKA3-205ENST00000465471 CCDC137Q6PK04 289 aaKnown RBP20.22■□□□□ 0.83
SKA3-205ENST00000465471 GSTA5Q7RTV2 222 aa20.22■□□□□ 0.83
SKA3-205ENST00000465471 LINC00523Q86TU6 105 aa20.22■□□□□ 0.83
SKA3-205ENST00000465471 PHACTR4Q8IZ21 702 aa20.22■□□□□ 0.83
SKA3-205ENST00000465471 RBFAQ8N0V3 343 aa20.22■□□□□ 0.83
SKA3-205ENST00000465471 SLC25A45Q8N413 288 aa20.22■□□□□ 0.83
SKA3-205ENST00000465471 OR56A4Q8NGH8 313 aa20.22■□□□□ 0.83
SKA3-205ENST00000465471 BRSK1Q8TDC3 778 aa20.22■□□□□ 0.83
SKA3-205ENST00000465471 C19orf43Q9BQ61 176 aa20.22■□□□□ 0.83
SKA3-205ENST00000465471 TCEAL2Q9H3H9 227 aaPredicted RBP20.22■□□□□ 0.83
SKA3-205ENST00000465471 FGF22Q9HCT0 170 aa20.22■□□□□ 0.83
SKA3-205ENST00000465471 EIF2B3Q9NR50 452 aaKnown RBP20.22■□□□□ 0.83
SKA3-205ENST00000465471 UCKL1Q9NWZ5 548 aa20.22■□□□□ 0.83
SKA3-205ENST00000465471 CNOT6Q9ULM6 557 aaKnown RBP20.22■□□□□ 0.83
SKA3-205ENST00000465471 DGKBQ9Y6T7 804 aa20.22■□□□□ 0.83
SKA3-205ENST00000465471 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.21■□□□□ 0.83
SKA3-205ENST00000465471 GOLGA6L10A0A0M3HER8 536 aa20.21■□□□□ 0.83
SKA3-205ENST00000465471 DCDC2BA2VCK2 349 aa20.21■□□□□ 0.83
SKA3-205ENST00000465471 H3BM21 787 aa20.21■□□□□ 0.83
SKA3-205ENST00000465471 PDE2AO00408 941 aaPredicted RBP20.21■□□□□ 0.83
SKA3-205ENST00000465471 SDC3O75056 442 aa20.21■□□□□ 0.83
SKA3-205ENST00000465471 PPFIA2O75334 1257 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms