RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 GSDMCQ9BYG8 508 aa25.78■■□□□ 1.72
U2AF1-206ENST00000464750 DDX56Q9NY93 547 aaKnown RBP25.78■■□□□ 1.72
U2AF1-206ENST00000464750 SLC17A4Q9Y2C5 497 aa25.78■■□□□ 1.72
U2AF1-206ENST00000464750 A0A1W2PQM1 296 aa25.77■■□□□ 1.72
U2AF1-206ENST00000464750 D6RAR5 112 aa25.77■■□□□ 1.72
U2AF1-206ENST00000464750 SPOPO43791 374 aa25.77■■□□□ 1.72
U2AF1-206ENST00000464750 HOXB3P14651 431 aaPredicted RBP25.77■■□□□ 1.72
U2AF1-206ENST00000464750 GLB1P16278 677 aa25.77■■□□□ 1.72
U2AF1-206ENST00000464750 ZFXP17010 805 aaPredicted RBP25.77■■□□□ 1.72
U2AF1-206ENST00000464750 COMTP21964 271 aa25.77■■□□□ 1.72
U2AF1-206ENST00000464750 POLD2P49005 469 aa25.77■■□□□ 1.72
U2AF1-206ENST00000464750 ERVPABLB-1P60509 514 aa25.77■■□□□ 1.72
U2AF1-206ENST00000464750 DYNLT1P63172 113 aa25.77■■□□□ 1.72
U2AF1-206ENST00000464750 SKOR1P84550 965 aa25.77■■□□□ 1.72
U2AF1-206ENST00000464750 HLTFQ14527 1009 aaKnown RBP eCLIP25.77■■□□□ 1.72
U2AF1-206ENST00000464750 PDK1Q15118 436 aa25.77■■□□□ 1.72
U2AF1-206ENST00000464750 CCNJLQ8IV13 435 aa25.77■■□□□ 1.72
U2AF1-206ENST00000464750 CNTD1Q8N815 330 aa25.77■■□□□ 1.72
U2AF1-206ENST00000464750 TC2NQ8N9U0 490 aa25.77■■□□□ 1.72
U2AF1-206ENST00000464750 ZNF248Q8NDW4 579 aa25.77■■□□□ 1.72
U2AF1-206ENST00000464750 KIAA1524Q8TCG1 905 aa25.77■■□□□ 1.72
U2AF1-206ENST00000464750 HIC2Q96JB3 615 aa25.77■■□□□ 1.72
U2AF1-206ENST00000464750 OLFM3Q96PB7 478 aa25.77■■□□□ 1.72
U2AF1-206ENST00000464750 LYSMD1Q96S90 227 aa25.77■■□□□ 1.72
U2AF1-206ENST00000464750 CEP41Q9BYV8 373 aa25.77■■□□□ 1.72
U2AF1-206ENST00000464750 THSD1Q9NS62 852 aa25.77■■□□□ 1.72
U2AF1-206ENST00000464750 TRNAU1APQ9NX07 287 aaKnown RBP25.77■■□□□ 1.72
U2AF1-206ENST00000464750 IGSF10Q6WRI0 2623 aa25.77■■□□□ 1.72
U2AF1-206ENST00000464750 PMS2P1A4D2B8 440 aa25.76■■□□□ 1.71
U2AF1-206ENST00000464750 PPP1R12AO14974 1030 aaPredicted RBP25.76■■□□□ 1.71
U2AF1-206ENST00000464750 CLDN7O95471 211 aa25.76■■□□□ 1.71
U2AF1-206ENST00000464750 IVLP07476 585 aa25.76■■□□□ 1.71
U2AF1-206ENST00000464750 RBMS1P29558 406 aaKnown RBP25.76■■□□□ 1.71
U2AF1-206ENST00000464750 QPCTQ16769 361 aa25.76■■□□□ 1.71
U2AF1-206ENST00000464750 FAM182AQ5T1J6 154 aa25.76■■□□□ 1.71
U2AF1-206ENST00000464750 FOXR1Q6PIV2 292 aa25.76■■□□□ 1.71
U2AF1-206ENST00000464750 IGF2-ASQ6U949 168 aa25.76■■□□□ 1.71
U2AF1-206ENST00000464750 B3GNT8Q7Z7M8 397 aa25.76■■□□□ 1.71
U2AF1-206ENST00000464750 TRIM74Q86UV6 250 aa25.76■■□□□ 1.71
U2AF1-206ENST00000464750 NRROSQ86YC3 692 aa25.76■■□□□ 1.71
U2AF1-206ENST00000464750 Q8N9G6 341 aaPredicted RBP25.76■■□□□ 1.71
U2AF1-206ENST00000464750 WDR36Q8NI36 951 aaKnown RBP25.76■■□□□ 1.71
U2AF1-206ENST00000464750 NAF1Q96HR8 494 aaKnown RBP25.76■■□□□ 1.71
U2AF1-206ENST00000464750 AGAP2Q99490 1192 aa25.76■■□□□ 1.71
U2AF1-206ENST00000464750 LRRN3Q9H3W5 708 aa25.76■■□□□ 1.71
U2AF1-206ENST00000464750 SPATS2LQ9NUQ6 558 aaKnown RBP25.76■■□□□ 1.71
U2AF1-206ENST00000464750 SEPT10Q9P0V9 454 aa25.76■■□□□ 1.71
U2AF1-206ENST00000464750 APPL1Q9UKG1 709 aa25.76■■□□□ 1.71
U2AF1-206ENST00000464750 PCDHGA8Q9Y5G5 932 aa25.76■■□□□ 1.71
U2AF1-206ENST00000464750 RNF215Q9Y6U7 377 aa25.76■■□□□ 1.71
U2AF1-206ENST00000464750 LOC400499M0QZD8 3231 aa25.76■■□□□ 1.71
U2AF1-206ENST00000464750 CCDC187A0A096LP49 1063 aa25.75■■□□□ 1.71
U2AF1-206ENST00000464750 C1orf232A0A0U1RR37 186 aa25.75■■□□□ 1.71
U2AF1-206ENST00000464750 PYGLP06737 847 aa25.75■■□□□ 1.71
U2AF1-206ENST00000464750 AK4P27144 223 aaPredicted RBP25.75■■□□□ 1.71
U2AF1-206ENST00000464750 MFSD7Q6UXD7 560 aa25.75■■□□□ 1.71
U2AF1-206ENST00000464750 NLRP8Q86W28 1048 aa25.75■■□□□ 1.71
U2AF1-206ENST00000464750 SPACA3Q8IXA5 215 aa25.75■■□□□ 1.71
U2AF1-206ENST00000464750 NRSN1Q8IZ57 195 aa25.75■■□□□ 1.71
U2AF1-206ENST00000464750 PRR11Q96HE9 360 aaPredicted RBP25.75■■□□□ 1.71
U2AF1-206ENST00000464750 RIOK2Q9BVS4 552 aaKnown RBP25.75■■□□□ 1.71
U2AF1-206ENST00000464750 EPB41L5Q9HCM4 733 aa25.75■■□□□ 1.71
U2AF1-206ENST00000464750 TAAR2Q9P1P5 351 aa25.75■■□□□ 1.71
U2AF1-206ENST00000464750 LRIT1Q9P2V4 623 aa25.75■■□□□ 1.71
U2AF1-206ENST00000464750 PNLIPP16233 465 aa25.74■■□□□ 1.71
U2AF1-206ENST00000464750 MAGEA1P43355 309 aa25.74■■□□□ 1.71
U2AF1-206ENST00000464750 NOP2P46087 812 aaKnown RBP25.74■■□□□ 1.71
U2AF1-206ENST00000464750 MAZP56270 477 aaKnown RBP25.74■■□□□ 1.71
U2AF1-206ENST00000464750 SLC30A9Q6PML9 568 aa25.74■■□□□ 1.71
U2AF1-206ENST00000464750 SPRED1Q7Z699 444 aa25.74■■□□□ 1.71
U2AF1-206ENST00000464750 ZDHHC1Q8WTX9 485 aa25.74■■□□□ 1.71
U2AF1-206ENST00000464750 LIN37Q96GY3 246 aaPredicted RBP25.74■■□□□ 1.71
U2AF1-206ENST00000464750 OR2M4Q96R27 311 aa25.74■■□□□ 1.71
U2AF1-206ENST00000464750 CDH19Q9H159 772 aa25.74■■□□□ 1.71
U2AF1-206ENST00000464750 TMEM98Q9Y2Y6 226 aa25.74■■□□□ 1.71
U2AF1-206ENST00000464750 INPP4BO15327 924 aa25.73■■□□□ 1.71
U2AF1-206ENST00000464750 PSTPIP1O43586 416 aa25.73■■□□□ 1.71
U2AF1-206ENST00000464750 NUDT21O43809 227 aaKnown RBP25.73■■□□□ 1.71
U2AF1-206ENST00000464750 ADCY8P40145 1251 aa25.73■■□□□ 1.71
U2AF1-206ENST00000464750 HADHBP55084 474 aaKnown RBP25.73■■□□□ 1.71
U2AF1-206ENST00000464750 CTBSQ01459 385 aa25.73■■□□□ 1.71
U2AF1-206ENST00000464750 TLE3Q04726 772 aa25.73■■□□□ 1.71
U2AF1-206ENST00000464750 GALNT3Q14435 633 aa25.73■■□□□ 1.71
U2AF1-206ENST00000464750 RAVER1Q8IY67 606 aaKnown RBP25.73■■□□□ 1.71
U2AF1-206ENST00000464750 SCARF2Q96GP6 870 aaPredicted RBP25.73■■□□□ 1.71
U2AF1-206ENST00000464750 SLC46A1Q96NT5 459 aa25.73■■□□□ 1.71
U2AF1-206ENST00000464750 AGAP3Q96P47 875 aa25.73■■□□□ 1.71
U2AF1-206ENST00000464750 MLPHQ9BV36 600 aaPredicted RBP25.73■■□□□ 1.71
U2AF1-206ENST00000464750 ADGRE3Q9BY15 652 aa25.73■■□□□ 1.71
U2AF1-206ENST00000464750 FOXP3Q9BZS1 431 aa25.73■■□□□ 1.71
U2AF1-206ENST00000464750 SCN8AQ9UQD0 1980 aa25.73■■□□□ 1.71
U2AF1-206ENST00000464750 ANKRD66B4E2M5 251 aa25.72■■□□□ 1.71
U2AF1-206ENST00000464750 FGF1P05230 155 aa25.72■■□□□ 1.71
U2AF1-206ENST00000464750 CDKN2BP42772 138 aa25.72■■□□□ 1.71
U2AF1-206ENST00000464750 INHBCP55103 352 aa25.72■■□□□ 1.71
U2AF1-206ENST00000464750 B4GALNT4Q76KP1 1039 aa25.72■■□□□ 1.71
U2AF1-206ENST00000464750 MARK2Q7KZI7 788 aaKnown RBP25.72■■□□□ 1.71
U2AF1-206ENST00000464750 EXD1Q8NHP7 514 aa25.72■■□□□ 1.71
U2AF1-206ENST00000464750 KCNE4Q8WWG9 221 aa25.72■■□□□ 1.71
U2AF1-206ENST00000464750 IMP4Q96G21 291 aaKnown RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms