RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 PPP6R3Q5H9R7 873 aaPredicted RBP23.19■■□□□ 1.3
SSNA1-203ENST00000463511 PIM3Q86V86 326 aa23.19■■□□□ 1.3
SSNA1-203ENST00000463511 DTX1Q86Y01 620 aa23.19■■□□□ 1.3
SSNA1-203ENST00000463511 NUS1Q96E22 293 aa23.19■■□□□ 1.3
SSNA1-203ENST00000463511 COQ10AQ96MF6 247 aa23.19■■□□□ 1.3
SSNA1-203ENST00000463511 STARD5Q9NSY2 213 aa23.19■■□□□ 1.3
SSNA1-203ENST00000463511 PCDHB11Q9Y5F2 797 aa23.19■■□□□ 1.3
SSNA1-203ENST00000463511 NAV2Q8IVL1 2488 aa23.19■■□□□ 1.3
SSNA1-203ENST00000463511 PDE2AO00408 941 aaPredicted RBP23.18■■□□□ 1.3
SSNA1-203ENST00000463511 PROSCO94903 275 aa23.18■■□□□ 1.3
SSNA1-203ENST00000463511 CPNE6O95741 557 aa23.18■■□□□ 1.3
SSNA1-203ENST00000463511 ALDH4A1P30038 563 aa23.18■■□□□ 1.3
SSNA1-203ENST00000463511 PCK1P35558 622 aa23.18■■□□□ 1.3
SSNA1-203ENST00000463511 HADHBP55084 474 aaKnown RBP23.18■■□□□ 1.3
SSNA1-203ENST00000463511 CYP4F2P78329 520 aa23.18■■□□□ 1.3
SSNA1-203ENST00000463511 CNGA3Q16281 694 aa23.18■■□□□ 1.3
SSNA1-203ENST00000463511 XKR5Q6UX68 686 aa23.18■■□□□ 1.3
SSNA1-203ENST00000463511 CYP4V2Q6ZWL3 525 aaPredicted RBP23.18■■□□□ 1.3
SSNA1-203ENST00000463511 HEATR4Q86WZ0 1026 aa23.18■■□□□ 1.3
SSNA1-203ENST00000463511 NRROSQ86YC3 692 aa23.18■■□□□ 1.3
SSNA1-203ENST00000463511 CPNE8Q86YQ8 564 aa23.18■■□□□ 1.3
SSNA1-203ENST00000463511 TP53INP2Q8IXH6 220 aa23.18■■□□□ 1.3
SSNA1-203ENST00000463511 ZSCAN1Q8NBB4 408 aa23.18■■□□□ 1.3
SSNA1-203ENST00000463511 GPBAR1Q8TDU6 330 aa23.18■■□□□ 1.3
SSNA1-203ENST00000463511 ZDHHC1Q8WTX9 485 aa23.18■■□□□ 1.3
SSNA1-203ENST00000463511 NUDT22Q9BRQ3 303 aa23.18■■□□□ 1.3
SSNA1-203ENST00000463511 LACRTQ9GZZ8 138 aa23.18■■□□□ 1.3
SSNA1-203ENST00000463511 ADGRG1Q9Y653 693 aa23.18■■□□□ 1.3
SSNA1-203ENST00000463511 UBR5O95071 2799 aaPredicted RBP23.18■■□□□ 1.3
SSNA1-203ENST00000463511 A0A0A6YYK5 440 aaPredicted RBP23.17■■□□□ 1.3
SSNA1-203ENST00000463511 A0A0U1RQJ8 604 aa23.17■■□□□ 1.3
SSNA1-203ENST00000463511 RHPN2P1A8MT19 583 aa23.17■■□□□ 1.3
SSNA1-203ENST00000463511 TCF4P15884 667 aa23.17■■□□□ 1.3
SSNA1-203ENST00000463511 ARHGAP25P42331 645 aa23.17■■□□□ 1.3
SSNA1-203ENST00000463511 CSRP3P50461 194 aa23.17■■□□□ 1.3
SSNA1-203ENST00000463511 SLC10A7Q0GE19 358 aa23.17■■□□□ 1.3
SSNA1-203ENST00000463511 MESDQ14696 234 aa23.17■■□□□ 1.3
SSNA1-203ENST00000463511 DENND2CQ68D51 928 aa23.17■■□□□ 1.3
SSNA1-203ENST00000463511 ZNF438Q7Z4V0 828 aa23.17■■□□□ 1.3
SSNA1-203ENST00000463511 KIAA1328Q86T90 577 aa23.17■■□□□ 1.3
SSNA1-203ENST00000463511 RCBTB1Q8NDN9 531 aa23.17■■□□□ 1.3
SSNA1-203ENST00000463511 PDCD6IPQ8WUM4 868 aaKnown RBP23.17■■□□□ 1.3
SSNA1-203ENST00000463511 JPH3Q8WXH2 748 aaPredicted RBP23.17■■□□□ 1.3
SSNA1-203ENST00000463511 PSKH2Q96QS6 385 aa23.17■■□□□ 1.3
SSNA1-203ENST00000463511 GSDMCQ9BYG8 508 aa23.17■■□□□ 1.3
SSNA1-203ENST00000463511 PHPT1Q9NRX4 125 aaPredicted RBP23.17■■□□□ 1.3
SSNA1-203ENST00000463511 TAAR2Q9P1P5 351 aa23.17■■□□□ 1.3
SSNA1-203ENST00000463511 SEPT3Q9UH03 358 aa23.17■■□□□ 1.3
SSNA1-203ENST00000463511 LCMT1Q9UIC8 334 aa23.17■■□□□ 1.3
SSNA1-203ENST00000463511 DUSP10Q9Y6W6 482 aa23.17■■□□□ 1.3
SSNA1-203ENST00000463511 PTPN13Q12923 2485 aa23.16■■□□□ 1.3
SSNA1-203ENST00000463511 BTNL10A8MVZ5 291 aa23.16■■□□□ 1.3
SSNA1-203ENST00000463511 FUCA1P04066 466 aa23.16■■□□□ 1.3
SSNA1-203ENST00000463511 FGF1P05230 155 aa23.16■■□□□ 1.3
SSNA1-203ENST00000463511 CEACAM5P06731 702 aa23.16■■□□□ 1.3
SSNA1-203ENST00000463511 CCL4P13236 92 aa23.16■■□□□ 1.3
SSNA1-203ENST00000463511 ITGB6P18564 788 aa23.16■■□□□ 1.3
SSNA1-203ENST00000463511 AK4P27144 223 aaPredicted RBP23.16■■□□□ 1.3
SSNA1-203ENST00000463511 CD82P27701 267 aa23.16■■□□□ 1.3
SSNA1-203ENST00000463511 IL1R2P27930 398 aa23.16■■□□□ 1.3
SSNA1-203ENST00000463511 NOP2P46087 812 aaKnown RBP23.16■■□□□ 1.3
SSNA1-203ENST00000463511 GNPDA1P46926 289 aa23.16■■□□□ 1.3
SSNA1-203ENST00000463511 RENBPP51606 427 aa23.16■■□□□ 1.3
SSNA1-203ENST00000463511 ILF3Q12906 894 aaKnown RBP eCLIP23.16■■□□□ 1.3
SSNA1-203ENST00000463511 LBRQ14739 615 aaKnown RBP23.16■■□□□ 1.3
SSNA1-203ENST00000463511 TBR1Q16650 682 aa23.16■■□□□ 1.3
SSNA1-203ENST00000463511 TMCO4Q5TGY1 634 aa23.16■■□□□ 1.3
SSNA1-203ENST00000463511 TMEM164Q5U3C3 297 aa23.16■■□□□ 1.3
SSNA1-203ENST00000463511 C17orf82Q86X59 251 aaPredicted RBP23.16■■□□□ 1.3
SSNA1-203ENST00000463511 PTCD2Q8WV60 388 aaKnown RBP23.16■■□□□ 1.3
SSNA1-203ENST00000463511 PATE1Q8WXA2 126 aa23.16■■□□□ 1.3
SSNA1-203ENST00000463511 HTR3CQ8WXA8 447 aa23.16■■□□□ 1.3
SSNA1-203ENST00000463511 AKAP7Q9P0M2 348 aaPredicted RBP23.16■■□□□ 1.3
SSNA1-203ENST00000463511 PCDHGC4Q9Y5F7 938 aa23.16■■□□□ 1.3
SSNA1-203ENST00000463511 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.15■■□□□ 1.3
SSNA1-203ENST00000463511 PRPSAP2O60256 369 aa23.15■■□□□ 1.3
SSNA1-203ENST00000463511 ECEL1O95672 775 aa23.15■■□□□ 1.3
SSNA1-203ENST00000463511 CPP00450 1065 aa23.15■■□□□ 1.3
SSNA1-203ENST00000463511 VIPR1P32241 457 aa23.15■■□□□ 1.3
SSNA1-203ENST00000463511 ZNF235Q14590 738 aa23.15■■□□□ 1.3
SSNA1-203ENST00000463511 NR1D2Q14995 579 aa23.15■■□□□ 1.3
SSNA1-203ENST00000463511 SLC30A9Q6PML9 568 aa23.15■■□□□ 1.3
SSNA1-203ENST00000463511 ZNF574Q6ZN55 896 aaPredicted RBP23.15■■□□□ 1.3
SSNA1-203ENST00000463511 PMEPA1Q969W9 287 aa23.15■■□□□ 1.3
SSNA1-203ENST00000463511 CCDC74BQ96LY2 380 aa23.15■■□□□ 1.3
SSNA1-203ENST00000463511 TEX101Q9BY14 249 aa23.15■■□□□ 1.3
SSNA1-203ENST00000463511 FRMD8Q9BZ67 464 aaPredicted RBP23.15■■□□□ 1.3
SSNA1-203ENST00000463511 CWC15Q9P013 229 aaKnown RBP23.15■■□□□ 1.3
SSNA1-203ENST00000463511 IL17BQ9UHF5 180 aa23.15■■□□□ 1.3
SSNA1-203ENST00000463511 SUFUQ9UMX1 484 aa23.15■■□□□ 1.3
SSNA1-203ENST00000463511 IGHV5-10-1A0A0J9YXX1 117 aa23.14■■□□□ 1.29
SSNA1-203ENST00000463511 GOLGA6CA6NDK9 693 aa23.14■■□□□ 1.29
SSNA1-203ENST00000463511 GOLGA6BA6NDN3 693 aa23.14■■□□□ 1.29
SSNA1-203ENST00000463511 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.14■■□□□ 1.29
SSNA1-203ENST00000463511 TERTO14746 1132 aaKnown RBP23.14■■□□□ 1.29
SSNA1-203ENST00000463511 HTRA2O43464 458 aaPredicted RBP23.14■■□□□ 1.29
SSNA1-203ENST00000463511 HEXIM1O94992 359 aaKnown RBP23.14■■□□□ 1.29
SSNA1-203ENST00000463511 PTMAP06454 111 aaKnown RBP23.14■■□□□ 1.29
SSNA1-203ENST00000463511 GOLGA6DP0CG33 693 aa23.14■■□□□ 1.29
SSNA1-203ENST00000463511 MAN1A1P33908 653 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms