RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 CHD8Q9HCK8 2581 aa17.62■□□□□ 0.41
VPS52-214ENST00000463486 TNFRSF10CO14798 259 aa17.62■□□□□ 0.41
VPS52-214ENST00000463486 SCAMP1O15126 338 aa17.62■□□□□ 0.41
VPS52-214ENST00000463486 CEACAM5P06731 702 aa17.62■□□□□ 0.41
VPS52-214ENST00000463486 MYCLP1P12525 358 aaPredicted RBP17.62■□□□□ 0.41
VPS52-214ENST00000463486 HLA-DPA1P20036 260 aa17.62■□□□□ 0.41
VPS52-214ENST00000463486 HK3P52790 923 aa17.62■□□□□ 0.41
VPS52-214ENST00000463486 SRP54P61011 504 aaKnown RBP17.62■□□□□ 0.41
VPS52-214ENST00000463486 SIM1P81133 766 aaPredicted RBP17.62■□□□□ 0.41
VPS52-214ENST00000463486 CDK3Q00526 305 aa17.62■□□□□ 0.41
VPS52-214ENST00000463486 P3H1Q32P28 736 aa17.62■□□□□ 0.41
VPS52-214ENST00000463486 PROX2Q3B8N5 592 aa17.62■□□□□ 0.41
VPS52-214ENST00000463486 ENPP7Q6UWV6 458 aa17.62■□□□□ 0.41
VPS52-214ENST00000463486 PRUNE1Q86TP1 453 aa17.62■□□□□ 0.41
VPS52-214ENST00000463486 SLCO6A1Q86UG4 719 aa17.62■□□□□ 0.41
VPS52-214ENST00000463486 PHACTR4Q8IZ21 702 aa17.62■□□□□ 0.41
VPS52-214ENST00000463486 SLC25A41Q8N5S1 370 aa17.62■□□□□ 0.41
VPS52-214ENST00000463486 PDXPQ96GD0 296 aa17.62■□□□□ 0.41
VPS52-214ENST00000463486 COX14Q96I36 57 aa17.62■□□□□ 0.41
VPS52-214ENST00000463486 MS4A14Q96JA4 679 aa17.62■□□□□ 0.41
VPS52-214ENST00000463486 LRRC61Q9BV99 259 aa17.62■□□□□ 0.41
VPS52-214ENST00000463486 FICDQ9BVA6 458 aa17.62■□□□□ 0.41
VPS52-214ENST00000463486 FRMD8Q9BZ67 464 aaPredicted RBP17.62■□□□□ 0.41
VPS52-214ENST00000463486 FAM83DQ9H4H8 585 aa17.62■□□□□ 0.41
VPS52-214ENST00000463486 ARNT2Q9HBZ2 717 aa17.62■□□□□ 0.41
VPS52-214ENST00000463486 NFKBIL1Q9UBC1 381 aaPredicted RBP17.62■□□□□ 0.41
VPS52-214ENST00000463486 ZKSCAN5Q9Y2L8 839 aa17.62■□□□□ 0.41
VPS52-214ENST00000463486 CSNK1G3Q9Y6M4 447 aa17.62■□□□□ 0.41
VPS52-214ENST00000463486 AKAP13Q12802 2813 aa17.62■□□□□ 0.41
VPS52-214ENST00000463486 LY6G6EA0A0G2JKS1 128 aa17.61■□□□□ 0.41
VPS52-214ENST00000463486 FADS2P1A8MWK0 482 aa17.61■□□□□ 0.41
VPS52-214ENST00000463486 CACNB4O00305 520 aaPredicted RBP17.61■□□□□ 0.41
VPS52-214ENST00000463486 FANCGO15287 622 aa17.61■□□□□ 0.41
VPS52-214ENST00000463486 FGF1P05230 155 aa17.61■□□□□ 0.41
VPS52-214ENST00000463486 CELA2BP08218 269 aaPredicted RBP17.61■□□□□ 0.41
VPS52-214ENST00000463486 ADRB1P08588 477 aa17.61■□□□□ 0.41
VPS52-214ENST00000463486 ETS1P14921 441 aa17.61■□□□□ 0.41
VPS52-214ENST00000463486 BPIP17213 487 aa17.61■□□□□ 0.41
VPS52-214ENST00000463486 HTR1BP28222 390 aa17.61■□□□□ 0.41
VPS52-214ENST00000463486 HMGCLP35914 325 aa17.61■□□□□ 0.41
VPS52-214ENST00000463486 PPARDQ03181 441 aa17.61■□□□□ 0.41
VPS52-214ENST00000463486 SNX1Q13596 522 aa17.61■□□□□ 0.41
VPS52-214ENST00000463486 RAET1GQ6H3X3 334 aa17.61■□□□□ 0.41
VPS52-214ENST00000463486 CCDC70Q6NSX1 233 aa17.61■□□□□ 0.41
VPS52-214ENST00000463486 OR56A4Q8NGH8 313 aa17.61■□□□□ 0.41
VPS52-214ENST00000463486 OR4C6Q8NH72 309 aa17.61■□□□□ 0.41
VPS52-214ENST00000463486 CCHCR1Q8TD31 782 aa17.61■□□□□ 0.41
VPS52-214ENST00000463486 COG1Q8WTW3 980 aa17.61■□□□□ 0.41
VPS52-214ENST00000463486 SCARF2Q96GP6 870 aaPredicted RBP17.61■□□□□ 0.41
VPS52-214ENST00000463486 PBKQ96KB5 322 aa17.61■□□□□ 0.41
VPS52-214ENST00000463486 SRPK1Q96SB4 655 aaKnown RBP17.61■□□□□ 0.41
VPS52-214ENST00000463486 CDC6Q99741 560 aa17.61■□□□□ 0.41
VPS52-214ENST00000463486 APOL2Q9BQE5 337 aa17.61■□□□□ 0.41
VPS52-214ENST00000463486 TRABDQ9H4I3 376 aa17.61■□□□□ 0.41
VPS52-214ENST00000463486 MRPL40Q9NQ50 206 aaKnown RBP17.61■□□□□ 0.41
VPS52-214ENST00000463486 IL17CQ9P0M4 197 aa17.61■□□□□ 0.41
VPS52-214ENST00000463486 ZNF148Q9UQR1 794 aa17.61■□□□□ 0.41
VPS52-214ENST00000463486 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.61■□□□□ 0.41
VPS52-214ENST00000463486 U3KQA8 63 aa17.61■□□□□ 0.41
VPS52-214ENST00000463486 GOLGA4Q13439 2230 aaKnown RBP17.61■□□□□ 0.41
VPS52-214ENST00000463486 AQP9O43315 295 aa17.6■□□□□ 0.41
VPS52-214ENST00000463486 TNFSF14O43557 240 aa17.6■□□□□ 0.41
VPS52-214ENST00000463486 SIGLEC6O43699 453 aa17.6■□□□□ 0.41
VPS52-214ENST00000463486 KIF5CO60282 957 aa17.6■□□□□ 0.41
VPS52-214ENST00000463486 USP12O75317 370 aa17.6■□□□□ 0.41
VPS52-214ENST00000463486 GPR1P46091 355 aa17.6■□□□□ 0.41
VPS52-214ENST00000463486 DCDC1P59894 354 aa17.6■□□□□ 0.41
VPS52-214ENST00000463486 SPARCL1Q14515 664 aa17.6■□□□□ 0.41
VPS52-214ENST00000463486 PRPSAP1Q14558 356 aa17.6■□□□□ 0.41
VPS52-214ENST00000463486 LONRF2Q1L5Z9 754 aa17.6■□□□□ 0.41
VPS52-214ENST00000463486 PRRT3Q5FWE3 981 aa17.6■□□□□ 0.41
VPS52-214ENST00000463486 FAXCQ5TGI0 409 aa17.6■□□□□ 0.41
VPS52-214ENST00000463486 ARHGEF18Q6ZSZ5 1173 aa17.6■□□□□ 0.41
VPS52-214ENST00000463486 HID1Q8IV36 788 aa17.6■□□□□ 0.41
VPS52-214ENST00000463486 BTN2A2Q8WVV5 523 aa17.6■□□□□ 0.41
VPS52-214ENST00000463486 OSBPL9Q96SU4 736 aa17.6■□□□□ 0.41
VPS52-214ENST00000463486 GPR63Q9BZJ6 419 aa17.6■□□□□ 0.41
VPS52-214ENST00000463486 KCND1Q9NSA2 647 aa17.6■□□□□ 0.41
VPS52-214ENST00000463486 PKD2L2Q9NZM6 624 aa17.6■□□□□ 0.41
VPS52-214ENST00000463486 KLQ9UEF7 1012 aa17.6■□□□□ 0.41
VPS52-214ENST00000463486 APOBEC3BQ9UH17 382 aaKnown RBP17.6■□□□□ 0.41
VPS52-214ENST00000463486 TMPRSS11EQ9UL52 423 aa17.6■□□□□ 0.41
VPS52-214ENST00000463486 SLC17A4Q9Y2C5 497 aa17.6■□□□□ 0.41
VPS52-214ENST00000463486 SCN8AQ9UQD0 1980 aa17.6■□□□□ 0.41
VPS52-214ENST00000463486 LMO7DNF2Z398 122 aa17.59■□□□□ 0.41
VPS52-214ENST00000463486 RASGRP1O95267 797 aa17.59■□□□□ 0.41
VPS52-214ENST00000463486 KCNJ1P48048 391 aa17.59■□□□□ 0.41
VPS52-214ENST00000463486 POLD2P49005 469 aa17.59■□□□□ 0.41
VPS52-214ENST00000463486 C1orf61Q13536 156 aa17.59■□□□□ 0.41
VPS52-214ENST00000463486 INAVAQ3KP66 663 aa17.59■□□□□ 0.41
VPS52-214ENST00000463486 LMX1AQ8TE12 382 aa17.59■□□□□ 0.41
VPS52-214ENST00000463486 MAIP1Q8WWC4 291 aa17.59■□□□□ 0.41
VPS52-214ENST00000463486 PPP1R2P1Q96PQ5 205 aa17.59■□□□□ 0.41
VPS52-214ENST00000463486 TBL1YQ9BQ87 522 aa17.59■□□□□ 0.41
VPS52-214ENST00000463486 FSD1LQ9BXM9 530 aa17.59■□□□□ 0.41
VPS52-214ENST00000463486 CDH19Q9H159 772 aa17.59■□□□□ 0.41
VPS52-214ENST00000463486 IL26Q9NPH9 171 aa17.59■□□□□ 0.41
VPS52-214ENST00000463486 PHPT1Q9NRX4 125 aaPredicted RBP17.59■□□□□ 0.41
VPS52-214ENST00000463486 NLGN3Q9NZ94 848 aa17.59■□□□□ 0.41
VPS52-214ENST00000463486 SMARCAL1Q9NZC9 954 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms