RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 ADI1Q9BV57 179 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 SYTL2Q9HCH5 934 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 C12orf4Q9NQ89 552 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 GPATCH2LQ9NWQ4 482 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 VANGL2Q9ULK5 521 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 SNX7Q9UNH6 387 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 PRG3Q9Y2Y8 225 aaPredicted RBP6.2□□□□□ -1.42
VPS13D-202ENST00000460333 NR2E1Q9Y466 385 aa6.2□□□□□ -1.42
VPS13D-202ENST00000460333 PARP14Q460N5 1801 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 EP400Q96L91 3159 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 TCRBV7S2A1N4TA0A589 114 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 WDR27A2RRH5 827 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 ERI2A8K979 691 aaKnown RBP6.19□□□□□ -1.42
VPS13D-202ENST00000460333 PSMD11O00231 422 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 PLK4O00444 970 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 DENRO43583 198 aaKnown RBP6.19□□□□□ -1.42
VPS13D-202ENST00000460333 DNAJA2O60884 412 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 LBPP18428 481 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 AOC1P19801 751 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 CCND3P30281 292 aaPredicted RBP6.19□□□□□ -1.42
VPS13D-202ENST00000460333 STAT5AP42229 794 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 CD151P48509 253 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 P2RY8Q86VZ1 359 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 CCDC36Q8IYA8 594 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 WDTC1Q8N5D0 677 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 SMG8Q8ND04 991 aaKnown RBP6.19□□□□□ -1.42
VPS13D-202ENST00000460333 SPOCK2Q92563 424 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 FCGR1BQ92637 280 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 PRKD2Q9BZL6 878 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 RNF39Q9H2S5 420 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 NOL11Q9H8H0 719 aaKnown RBP6.19□□□□□ -1.42
VPS13D-202ENST00000460333 TBC1D13Q9NVG8 400 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 LIMD1Q9UGP4 676 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 GSTK1Q9Y2Q3 226 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 PTPRFP10586 1907 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF487B1APH4 448 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF197O14709 1029 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 PAPSS1O43252 624 aaPredicted RBP6.19□□□□□ -1.42
VPS13D-202ENST00000460333 NDUFS3O75489 264 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 CLPXO76031 633 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 SEMA3DO95025 777 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 DBTP11182 482 aaKnown RBP6.19□□□□□ -1.42
VPS13D-202ENST00000460333 RPS9P46781 194 aaKnown RBP6.19□□□□□ -1.42
VPS13D-202ENST00000460333 RGS4P49798 205 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 CLCNKBP51801 687 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 MTX3Q5HYI7 312 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 MRNIPQ6NTE8 343 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 EIF3MQ7L2H7 374 aaKnown RBP6.19□□□□□ -1.42
VPS13D-202ENST00000460333 C16orf62Q7Z3J2 963 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 KCNMB4Q86W47 210 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 COLGALT1Q8NBJ5 622 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 TRUB1Q8WWH5 349 aaKnown RBP6.19□□□□□ -1.42
VPS13D-202ENST00000460333 FIG4Q92562 907 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 PANX3Q96QZ0 392 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 CDK5RAP1Q96SZ6 601 aaKnown RBP6.19□□□□□ -1.42
VPS13D-202ENST00000460333 SLC9A7Q96T83 725 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 EBNA1BP2Q99848 306 aaKnown RBP6.19□□□□□ -1.42
VPS13D-202ENST00000460333 OR2B2Q9GZK3 357 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 ABCC13Q9NSE7 274 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 OLA1Q9NTK5 396 aaKnown RBP6.19□□□□□ -1.42
VPS13D-202ENST00000460333 ABI2Q9NYB9 513 aaPredicted RBP6.19□□□□□ -1.42
VPS13D-202ENST00000460333 PSME2Q9UL46 239 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 PPM1HQ9ULR3 514 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 PCDHB8Q9UN66 801 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 PLXNB2O15031 1838 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 OR6C75A6NL08 312 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF701M0R085 212 aaPredicted RBP6.19□□□□□ -1.42
VPS13D-202ENST00000460333 ZMPSTE24O75844 475 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 DNAJB5O75953 348 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 BMP10O95393 424 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 ZSCAN5DPP0CG00 497 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 ATP5F1P24539 256 aaPredicted RBP6.19□□□□□ -1.42
VPS13D-202ENST00000460333 SLC7A1P30825 629 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 TIE1P35590 1138 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 HNF4AP41235 474 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 KPNA1P52294 538 aaPredicted RBP6.19□□□□□ -1.42
VPS13D-202ENST00000460333 OXCT1P55809 520 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 CSNK2BP67870 215 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 NOMO1Q15155 1222 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 RAB30Q15771 203 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 INTS6LQ5JSJ4 861 aaKnown RBP6.19□□□□□ -1.42
VPS13D-202ENST00000460333 UBXN11Q5T124 520 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 PSRC1Q6PGN9 363 aaPredicted RBP6.19□□□□□ -1.42
VPS13D-202ENST00000460333 ALKAL1Q6UXT8 129 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 MRPL10Q7Z7H8 261 aaKnown RBP6.19□□□□□ -1.42
VPS13D-202ENST00000460333 RELL1Q8IUW5 271 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 GALNT6Q8NCL4 622 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 ZNF540Q8NDQ6 660 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 MYLPFQ96A32 169 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 NXNL1Q96CM4 212 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 DPEP3Q9H4B8 488 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 TRMT13Q9NUP7 481 aaKnown RBP6.19□□□□□ -1.42
VPS13D-202ENST00000460333 RNF19AQ9NV58 838 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 RNF186Q9NXI6 227 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 PFDN2Q9UHV9 154 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 TRHDEQ9UKU6 1024 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 TMCC3Q9ULS5 477 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.19□□□□□ -1.42
VPS13D-202ENST00000460333 GMPPBQ9Y5P6 360 aa6.19□□□□□ -1.42
VPS13D-202ENST00000460333 DOCK5Q9H7D0 1870 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms