RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 CLK4Q9HAZ1 481 aaKnown RBP3.44□□□□□ -1.86
VPS8-215ENST00000460158 TRPV4Q9HBA0 871 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 CYSLTR2Q9NS75 346 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 INTS6Q9UL03 887 aaKnown RBP3.44□□□□□ -1.86
VPS8-215ENST00000460158 MKLN1Q9UL63 735 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 DUSP12Q9UNI6 340 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 ATP6V0A2Q9Y487 856 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 LSM4Q9Y4Z0 139 aaKnown RBP3.44□□□□□ -1.86
VPS8-215ENST00000460158 PTGDR2Q9Y5Y4 395 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 ZFP37Q9Y6Q3 630 aaPredicted RBP3.44□□□□□ -1.86
VPS8-215ENST00000460158 PIAS3Q9Y6X2 628 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 hCG_1807616A0A1W2PRN6 198 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 LRRC53A6NM62 1247 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 H0Y626 953 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 VWA5AO00534 786 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 IPO8O15397 1037 aaKnown RBP3.43□□□□□ -1.86
VPS8-215ENST00000460158 SEC14L5O43304 696 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 SPRY3O43610 288 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 SOX30O94993 753 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 GOSR1O95249 250 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 SLU7O95391 586 aaKnown RBP3.43□□□□□ -1.86
VPS8-215ENST00000460158 BMP15O95972 392 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 SPARCP09486 303 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 HSPA1AP0DMV8 641 aaKnown RBP3.43□□□□□ -1.86
VPS8-215ENST00000460158 HSPA1BP0DMV9 641 aaKnown RBP3.43□□□□□ -1.86
VPS8-215ENST00000460158 ETFAP13804 333 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 PORP16435 677 aaPredicted RBP3.43□□□□□ -1.86
VPS8-215ENST00000460158 NAGAP17050 411 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 AGAP20933 346 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 ARRB2P32121 409 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 SHMT1P34896 483 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 HOXD13P35453 343 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 RARSP54136 660 aaKnown RBP3.43□□□□□ -1.86
VPS8-215ENST00000460158 LINC00205P59089 165 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 RPS3AP61247 264 aaKnown RBP3.43□□□□□ -1.86
VPS8-215ENST00000460158 RPL7AP62424 266 aaKnown RBP3.43□□□□□ -1.86
VPS8-215ENST00000460158 ABATP80404 500 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 ADORA2A-AS1P86434 159 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 ROR2Q01974 943 aaKnown RBP3.43□□□□□ -1.86
VPS8-215ENST00000460158 MAP2K1Q02750 393 aaPredicted RBP3.43□□□□□ -1.86
VPS8-215ENST00000460158 LRRC74AQ0VAA2 488 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 ITGADQ13349 1161 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 CTTNQ14247 550 aaKnown RBP3.43□□□□□ -1.86
VPS8-215ENST00000460158 ALG11Q2TAA5 492 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 COL28A1Q2UY09 1125 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 ANKDD1AQ495B1 522 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 KRTCAP3Q53RY4 240 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 SGO1Q5FBB7 561 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 FSCBQ5H9T9 825 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 HIST2H2BCQ6DN03 193 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 HIST2H2BDQ6DRA6 164 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 RAB12Q6IQ22 244 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 NAA16Q6N069 864 aaPredicted RBP3.43□□□□□ -1.86
VPS8-215ENST00000460158 IRGCQ6NXR0 463 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 ZNF549Q6P9A3 640 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 SHQ1Q6PI26 577 aaKnown RBP3.43□□□□□ -1.86
VPS8-215ENST00000460158 FBXO46Q6PJ61 603 aaPredicted RBP3.43□□□□□ -1.86
VPS8-215ENST00000460158 KDELC1Q6UW63 502 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.43□□□□□ -1.86
VPS8-215ENST00000460158 SFTPA2Q8IWL1 248 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 RPAP2Q8IXW5 612 aaPredicted RBP3.43□□□□□ -1.86
VPS8-215ENST00000460158 ZNF619Q8N2I2 560 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 ZCCHC9Q8N567 271 aaKnown RBP3.43□□□□□ -1.86
VPS8-215ENST00000460158 PRR26Q8N8Z3 221 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 ETNPPLQ8TBG4 499 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 ARRDC2Q8TBH0 407 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 ERGIC1Q969X5 290 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 ZBTB9Q96C00 473 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 NSUN4Q96CB9 384 aaKnown RBP3.43□□□□□ -1.86
VPS8-215ENST00000460158 RBM18Q96H35 190 aaKnown RBP3.43□□□□□ -1.86
VPS8-215ENST00000460158 POLR3CQ9BUI4 534 aaPredicted RBP3.43□□□□□ -1.86
VPS8-215ENST00000460158 EDEM3Q9BZQ6 932 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 TKTL2Q9H0I9 626 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 VPS33BQ9H267 617 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 SCPEP1Q9HB40 452 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 MAGEE1Q9HCI5 957 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 DDX4Q9NQI0 724 aaKnown RBP3.43□□□□□ -1.86
VPS8-215ENST00000460158 EIF2B3Q9NR50 452 aaKnown RBP3.43□□□□□ -1.86
VPS8-215ENST00000460158 TMEM51Q9NW97 253 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 TRMT1Q9NXH9 659 aaKnown RBP3.43□□□□□ -1.86
VPS8-215ENST00000460158 TMEM5Q9Y2B1 443 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 NFE2L3Q9Y4A8 694 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 ANGPTL3Q9Y5C1 460 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 SNX8Q9Y5X2 465 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 PSAT1Q9Y617 370 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 FLT1P17948 1338 aa3.43□□□□□ -1.86
VPS8-215ENST00000460158 TDRD9Q8NDG6 1382 aaKnown RBP3.42□□□□□ -1.86
VPS8-215ENST00000460158 MYMKA6NI61 221 aa3.42□□□□□ -1.86
VPS8-215ENST00000460158 OR6C75A6NL08 312 aa3.42□□□□□ -1.86
VPS8-215ENST00000460158 FAM25EA8MYX2 175 aa3.42□□□□□ -1.86
VPS8-215ENST00000460158 USP17L23D6RBM5 183 aa3.42□□□□□ -1.86
VPS8-215ENST00000460158 J3KR12 359 aa3.42□□□□□ -1.86
VPS8-215ENST00000460158 GTPBP1O00178 669 aaKnown RBP3.42□□□□□ -1.86
VPS8-215ENST00000460158 PSMA7O14818 248 aa3.42□□□□□ -1.86
VPS8-215ENST00000460158 TIMM23O14925 209 aa3.42□□□□□ -1.86
VPS8-215ENST00000460158 TSPAN9O75954 239 aa3.42□□□□□ -1.86
VPS8-215ENST00000460158 SEC14L2O76054 403 aa3.42□□□□□ -1.86
VPS8-215ENST00000460158 RPS2P15880 293 aaKnown RBP3.42□□□□□ -1.86
VPS8-215ENST00000460158 HLA-DPA1P20036 260 aa3.42□□□□□ -1.86
VPS8-215ENST00000460158 IL4RP24394 825 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms