RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 MAGEE1Q9HCI5 957 aa18.03■□□□□ 0.48
PDLIM2-215ENST00000456545 MRPL40Q9NQ50 206 aaKnown RBP18.03■□□□□ 0.48
PDLIM2-215ENST00000456545 GULP1Q9UBP9 304 aa18.03■□□□□ 0.48
PDLIM2-215ENST00000456545 PNMA8BQ9ULN7 279 aaPredicted RBP18.03■□□□□ 0.48
PDLIM2-215ENST00000456545 WASF3Q9UPY6 502 aa18.03■□□□□ 0.48
PDLIM2-215ENST00000456545 SHOC2Q9UQ13 582 aa18.03■□□□□ 0.48
PDLIM2-215ENST00000456545 CPED1A4D0V7 1026 aa18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 DDX3YO15523 660 aaKnown RBP18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 ASMTLO95671 621 aa18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 PIRTP0C851 137 aa18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 GIMD1P0DJR0 217 aa18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 CKMT1AP12532 417 aa18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 MYF5P13349 255 aa18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 CD68P34810 354 aaPredicted RBP18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 WNT3AP56704 352 aa18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 CDK3Q00526 305 aa18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 NR0B2Q15466 257 aa18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 DOK6Q6PKX4 331 aa18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 ZNF765Q7L2R6 523 aa18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 TMPRSS7Q7RTY8 843 aa18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 LYSMD3Q7Z3D4 306 aa18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 NLRP8Q86W28 1048 aa18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 RAVER1Q8IY67 606 aaKnown RBP18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 SLC25A41Q8N5S1 370 aa18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 OR1E3Q8WZA6 343 aa18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 HES6Q96HZ4 224 aa18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 TRIB3Q96RU7 358 aa18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 HERPUD2Q9BSE4 406 aa18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 FSD1LQ9BXM9 530 aa18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 CLPBQ9H078 707 aa18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 CARS2Q9HA77 564 aaKnown RBP18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 RAD18Q9NS91 495 aa18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 DGKBQ9Y6T7 804 aa18.02■□□□□ 0.48
PDLIM2-215ENST00000456545 PRSS38A1L453 326 aa18.01■□□□□ 0.47
PDLIM2-215ENST00000456545 RGSL1A5PLK6 1076 aa18.01■□□□□ 0.47
PDLIM2-215ENST00000456545 ANXA9O76027 345 aa18.01■□□□□ 0.47
PDLIM2-215ENST00000456545 DKK1O94907 266 aa18.01■□□□□ 0.47
PDLIM2-215ENST00000456545 TEAD1P28347 426 aa18.01■□□□□ 0.47
PDLIM2-215ENST00000456545 SPINT3P49223 89 aa18.01■□□□□ 0.47
PDLIM2-215ENST00000456545 GEMP55040 296 aa18.01■□□□□ 0.47
PDLIM2-215ENST00000456545 MPP3Q13368 585 aa18.01■□□□□ 0.47
PDLIM2-215ENST00000456545 RPS6KA1Q15418 735 aa18.01■□□□□ 0.47
PDLIM2-215ENST00000456545 CDKN3Q16667 212 aa18.01■□□□□ 0.47
PDLIM2-215ENST00000456545 ANKRD20A2Q5SQ80 823 aa18.01■□□□□ 0.47
PDLIM2-215ENST00000456545 ANKRD20A1Q5TYW2 823 aa18.01■□□□□ 0.47
PDLIM2-215ENST00000456545 ANKRD20A3Q5VUR7 823 aa18.01■□□□□ 0.47
PDLIM2-215ENST00000456545 LVRNQ6Q4G3 990 aa18.01■□□□□ 0.47
PDLIM2-215ENST00000456545 TMPRSS12Q86WS5 348 aa18.01■□□□□ 0.47
PDLIM2-215ENST00000456545 IPMKQ8NFU5 416 aa18.01■□□□□ 0.47
PDLIM2-215ENST00000456545 TADA1Q96BN2 335 aa18.01■□□□□ 0.47
PDLIM2-215ENST00000456545 LRRC45Q96CN5 670 aa18.01■□□□□ 0.47
PDLIM2-215ENST00000456545 PDXPQ96GD0 296 aa18.01■□□□□ 0.47
PDLIM2-215ENST00000456545 HIC2Q96JB3 615 aa18.01■□□□□ 0.47
PDLIM2-215ENST00000456545 FGF22Q9HCT0 170 aa18.01■□□□□ 0.47
PDLIM2-215ENST00000456545 SIRPGQ9P1W8 387 aa18.01■□□□□ 0.47
PDLIM2-215ENST00000456545 GPR34Q9UPC5 381 aa18.01■□□□□ 0.47
PDLIM2-215ENST00000456545 INPP4BO15327 924 aa18■□□□□ 0.47
PDLIM2-215ENST00000456545 EPOP01588 193 aa18■□□□□ 0.47
PDLIM2-215ENST00000456545 GNPDA1P46926 289 aa18■□□□□ 0.47
PDLIM2-215ENST00000456545 C6orf132Q5T0Z8 1188 aa18■□□□□ 0.47
PDLIM2-215ENST00000456545 UNQ6494/PRO21346Q6UXR6 183 aa18■□□□□ 0.47
PDLIM2-215ENST00000456545 ADAMTSL4Q6UY14 1074 aa18■□□□□ 0.47
PDLIM2-215ENST00000456545 NYAP1Q6ZVC0 841 aa18■□□□□ 0.47
PDLIM2-215ENST00000456545 FAM46DQ8NEK8 389 aa18■□□□□ 0.47
PDLIM2-215ENST00000456545 SPATA16Q9BXB7 569 aa18■□□□□ 0.47
PDLIM2-215ENST00000456545 GBA3Q9H227 469 aa18■□□□□ 0.47
PDLIM2-215ENST00000456545 AAR2Q9Y312 384 aaKnown RBP18■□□□□ 0.47
PDLIM2-215ENST00000456545 ZNF711Q9Y462 761 aa18■□□□□ 0.47
PDLIM2-215ENST00000456545 GPSM3Q9Y4H4 160 aa18■□□□□ 0.47
PDLIM2-215ENST00000456545 ARID1BQ8NFD5 2236 aaPredicted RBP17.99■□□□□ 0.47
PDLIM2-215ENST00000456545 NCOR2Q9Y618 2525 aa17.99■□□□□ 0.47
PDLIM2-215ENST00000456545 FAM149AA5PLN7 773 aa17.99■□□□□ 0.47
PDLIM2-215ENST00000456545 FAM221BA6H8Z2 402 aa17.99■□□□□ 0.47
PDLIM2-215ENST00000456545 CELA2BP08218 269 aaPredicted RBP17.99■□□□□ 0.47
PDLIM2-215ENST00000456545 POLD2P49005 469 aa17.99■□□□□ 0.47
PDLIM2-215ENST00000456545 CCZ1BP86790 482 aa17.99■□□□□ 0.47
PDLIM2-215ENST00000456545 CCZ1P86791 482 aaPredicted RBP17.99■□□□□ 0.47
PDLIM2-215ENST00000456545 SMAD1Q15797 465 aaKnown RBP17.99■□□□□ 0.47
PDLIM2-215ENST00000456545 KDELC1Q6UW63 502 aa17.99■□□□□ 0.47
PDLIM2-215ENST00000456545 CCNI2Q6ZMN8 369 aaPredicted RBP17.99■□□□□ 0.47
PDLIM2-215ENST00000456545 EFL1Q7Z2Z2 1120 aaKnown RBP17.99■□□□□ 0.47
PDLIM2-215ENST00000456545 IFI44Q8TCB0 444 aa17.99■□□□□ 0.47
PDLIM2-215ENST00000456545 OXNAD1Q96HP4 312 aaPredicted RBP17.99■□□□□ 0.47
PDLIM2-215ENST00000456545 PPP1R2P1Q96PQ5 205 aa17.99■□□□□ 0.47
PDLIM2-215ENST00000456545 AGAP2Q99490 1192 aa17.99■□□□□ 0.47
PDLIM2-215ENST00000456545 TMEM168Q9H0V1 697 aa17.99■□□□□ 0.47
PDLIM2-215ENST00000456545 PADI4Q9UM07 663 aa17.99■□□□□ 0.47
PDLIM2-215ENST00000456545 TMEM98Q9Y2Y6 226 aa17.99■□□□□ 0.47
PDLIM2-215ENST00000456545 LOC285095A0A1B0GVY8 99 aa17.98■□□□□ 0.47
PDLIM2-215ENST00000456545 C1QTNF9BB2RNN3 333 aa17.98■□□□□ 0.47
PDLIM2-215ENST00000456545 CEACAM5P06731 702 aa17.98■□□□□ 0.47
PDLIM2-215ENST00000456545 C1QTNF9P0C862 333 aa17.98■□□□□ 0.47
PDLIM2-215ENST00000456545 HLA-DPA1P20036 260 aa17.98■□□□□ 0.47
PDLIM2-215ENST00000456545 ILF3Q12906 894 aaKnown RBP eCLIP17.98■□□□□ 0.47
PDLIM2-215ENST00000456545 SIRPB2Q5JXA9 342 aa17.98■□□□□ 0.47
PDLIM2-215ENST00000456545 HES3Q5TGS1 186 aa17.98■□□□□ 0.47
PDLIM2-215ENST00000456545 ALS2CLQ60I27 953 aa17.98■□□□□ 0.47
PDLIM2-215ENST00000456545 ZNF662Q6ZS27 426 aa17.98■□□□□ 0.47
PDLIM2-215ENST00000456545 ARHGEF18Q6ZSZ5 1173 aa17.98■□□□□ 0.47
PDLIM2-215ENST00000456545 MARK2Q7KZI7 788 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms