RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 CEACAM5P06731 702 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 GOLGA6DP0CG33 693 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 THRAP10827 490 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 FGF3P11487 239 aaPredicted RBP8□□□□□ -1.13
NIF3L1-209ENST00000454952 CCL4P13236 92 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 SLC2A4P14672 509 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 TNFAIP3P21580 790 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 MAP4P27816 1152 aaKnown RBP8□□□□□ -1.13
NIF3L1-209ENST00000454952 SERPINB6P35237 376 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 ARL4AP40617 200 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 PPM1FP49593 454 aaPredicted RBP8□□□□□ -1.13
NIF3L1-209ENST00000454952 COPB1P53618 953 aaKnown RBP8□□□□□ -1.13
NIF3L1-209ENST00000454952 POLE2P56282 527 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 UBXN1Q04323 297 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 TLE1Q04724 770 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 DPTQ07507 201 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 SRSF6Q13247 344 aaKnown RBP8□□□□□ -1.13
NIF3L1-209ENST00000454952 KCNAB2Q13303 367 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 MAMLD1Q13495 774 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 CNGA3Q16281 694 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 PPP6R3Q5H9R7 873 aaPredicted RBP8□□□□□ -1.13
NIF3L1-209ENST00000454952 KCTD16Q68DU8 428 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 PLEKHA7Q6IQ23 1121 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 TMEM71Q6P5X7 295 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 SLC30A9Q6PML9 568 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 TMCO3Q6UWJ1 677 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 ADAMTSL4Q6UY14 1074 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 RETREG3Q86VR2 466 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 LRRC49Q8IUZ0 686 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 ARHGAP12Q8IWW6 846 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 RAVER1Q8IY67 606 aaKnown RBP8□□□□□ -1.13
NIF3L1-209ENST00000454952 CACNA2D3Q8IZS8 1091 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 CCL4L1Q8NHW4 92 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 PRR7Q8TB68 274 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 PDCD6IPQ8WUM4 868 aaKnown RBP8□□□□□ -1.13
NIF3L1-209ENST00000454952 ART4Q93070 314 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 WNT2BQ93097 391 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 SH3KBP1Q96B97 665 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 TRIM11Q96F44 468 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 SCRN2Q96FV2 425 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 SCARF2Q96GP6 870 aaPredicted RBP8□□□□□ -1.13
NIF3L1-209ENST00000454952 OR2M4Q96R27 311 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 ERGIC2Q96RQ1 377 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 MGME1Q9BQP7 344 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 NUDT22Q9BRQ3 303 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 SNRNP25Q9BV90 132 aaKnown RBP8□□□□□ -1.13
NIF3L1-209ENST00000454952 TRIT1Q9H3H1 467 aaKnown RBP8□□□□□ -1.13
NIF3L1-209ENST00000454952 EPB41L1Q9H4G0 881 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 GOLGA6AQ9NYA3 693 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 CHMP5Q9NZZ3 219 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 LIMA1Q9UHB6 759 aaKnown RBP8□□□□□ -1.13
NIF3L1-209ENST00000454952 ANAPC2Q9UJX6 822 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 SUFUQ9UMX1 484 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 SCINQ9Y6U3 715 aa8□□□□□ -1.13
NIF3L1-209ENST00000454952 IGHV1OR21-1A0A087WYE8 117 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 A8MX80 341 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 RAD1O60671 282 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 MYBL1P10243 752 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 ZNF30P17039 623 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 GM2AP17900 193 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 CDK11BP21127 795 aaKnown RBP7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 CA4P22748 312 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 CES1P23141 567 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 MIPP30301 263 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 UGT1A3P35503 534 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 PCK1P35558 622 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 ADCY8P40145 1251 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 ETV3P41162 512 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 ACTR1BP42025 376 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 GPR1P46091 355 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 FASLGP48023 281 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 CDH6P55285 790 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 ACTR1AP61163 376 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 CTBSQ01459 385 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 MYL5Q02045 173 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 OGDHQ02218 1023 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 DPYSQ14117 519 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 SEPT6Q14141 434 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 CLCA4Q14CN2 919 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 BOLA3Q53S33 107 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 ARMC12Q5T9G4 340 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 MARC1Q5VT66 337 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 DENND2CQ68D51 928 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 WDR74Q6RFH5 385 aaPredicted RBP7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 CEACAM20Q6UY09 585 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 NYAP1Q6ZVC0 841 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 ZNF765Q7L2R6 523 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 TMPRSS9Q7Z410 1059 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 NLRP8Q86W28 1048 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 FAM129CQ86XR2 697 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 NRROSQ86YC3 692 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 GALNT13Q8IUC8 556 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 NRSN1Q8IZ57 195 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 NLGN4XQ8N0W4 816 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 NAGSQ8N159 534 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 CBARPQ8N350 705 aaPredicted RBP7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 ATPAF2Q8N5M1 289 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 NPWQ8N729 165 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 RCBTB1Q8NDN9 531 aa7.99□□□□□ -1.13
NIF3L1-209ENST00000454952 NLGN4YQ8NFZ3 816 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms