RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 RNF103O00237 685 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 GPC4O75487 556 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 BMP2P12643 396 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 BMP4P12644 408 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 NAGAP17050 411 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 CTGFP29279 349 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 PTGS2P35354 604 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 MAGEA3P43357 314 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 DPYSL2Q16555 572 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 UNC5BQ8IZJ1 945 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 KHSRPQ92945 711 aaKnown RBP eCLIP13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 KIF12Q96FN5 646 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 VMP1Q96GC9 406 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 CNDP1Q96KN2 507 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 SNX18Q96RF0 628 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 UHRF1Q96T88 793 aaPredicted RBP13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 ZNF304Q9HCX3 659 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 UBA2Q9UBT2 640 aaPredicted RBP13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 ZNF221Q9UK13 617 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 EMCNQ9ULC0 261 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 POLR1CO15160 346 aaPredicted RBP13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 PAPSS1O43252 624 aaPredicted RBP13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 SYNCRIPO60506 623 aaKnown RBP13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 CABYRO75952 493 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 NPY2RP49146 381 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 RPL14P50914 215 aaKnown RBP13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 FCHO2Q0JRZ9 810 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 PLCL1Q15111 1095 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 CDK10Q15131 360 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 GTF2IRD2BQ6EKJ0 949 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 GTF2IRD2Q86UP8 949 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 MFSD4AQ8N468 514 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 PACRGLQ8N7B6 248 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 GALNT6Q8NCL4 622 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 PSMA8Q8TAA3 256 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 SEPT8Q92599 483 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 CCDC126Q96EE4 140 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 SCN10AQ9Y5Y9 1956 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 PLA2G16P53816 162 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 NRLP54845 237 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 FRG1Q14331 258 aaKnown RBP13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 RFTN1Q14699 578 aaPredicted RBP13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 SNX17Q15036 470 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 ZNF773Q6PK81 442 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 IDO2Q6ZQW0 420 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 PCDH19Q8TAB3 1148 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 OMA1Q96E52 524 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 ZFYVE19Q96K21 471 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 OSMRQ99650 979 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 MRPL45Q9BRJ2 306 aaKnown RBP13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 EML4Q9HC35 981 aaKnown RBP13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 NRP1O14786 923 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 B3GALNT1O75752 331 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 SELPLGQ14242 412 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 TAF5Q15542 800 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 LYPD8Q6UX82 237 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 UNC93AQ86WB7 457 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 CCDC103Q8IW40 242 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 SCML4Q8N228 414 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 PCDH20Q8N6Y1 951 aaKnown RBP13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 PIWIL1Q96J94 861 aaKnown RBP13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 MRPL9Q9BYD2 267 aaKnown RBP13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 NMRAL1Q9HBL8 299 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 CD320Q9NPF0 282 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 ABCB10Q9NRK6 738 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 SEPT10Q9P0V9 454 aa13.45□□□□□ -0.26
SYNGAP1-204ENST00000449372 BRCA2P51587 3418 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 LINC00854A0A1B0GVQ3 168 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 PIRO00625 290 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 KCNK2O95069 426 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 JUNBP17275 347 aaPredicted RBP13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 RPL34P49207 117 aaKnown RBP13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 GALNT1Q10472 559 aaPredicted RBP13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 CADM2Q8N3J6 435 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 LRRC52Q8N7C0 313 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 C18orf25Q96B23 403 aaPredicted RBP13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 NXF3Q9H4D5 531 aaKnown RBP13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 ADPRHL2Q9NX46 363 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 GMIPQ9P107 970 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 BOLA1Q9Y3E2 137 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 HES2Q9Y543 173 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 HTTP42858 3142 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 hCG_2039718K7EN88 272 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 TREHO43280 583 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 B4GAT1O43505 415 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 TADA2AO75478 443 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 PRKACAP17612 351 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 PKLRP30613 574 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 PSEN2P49810 448 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 CCNYL2Q5T2Q4 361 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 NOTUMQ6P988 496 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 STRADAQ7RTN6 431 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 PID1Q7Z2X4 250 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 C12orf29Q8N999 325 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 POC5Q8NA72 575 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 FUNDC2Q9BWH2 189 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 PCM1Q15154 2024 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 A0A096LPK6 155 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 AXLP30530 894 aa13.44□□□□□ -0.26
SYNGAP1-204ENST00000449372 RRM2P31350 389 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms