RNA–Protein interactions for RNA: ENST00000447404.6

STRBP-204, Transcript of spermatid perinuclear RNA binding protein, human

APPRIS P1 TSL 2 BASIC

Gene STRBP, Length 6,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRBP-204	ENST00000447404	MAPRE2	Q15555	327 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	RSPO4	Q2I0M5	234 aa	Predicted RBP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	ACSM2B	Q68CK6	577 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	NCEH1	Q6PIU2	408 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	SLC44A3	Q8N4M1	653 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	MDGA1	Q8NFP4	955 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	SCAMP5	Q8TAC9	235 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	NMUR1	Q9HB89	426 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	CDHR5	Q9HBB8	845 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	DNMT3B	Q9UBC3	853 aa	Known RBP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	ERI2	A8K979	691 aa	Known RBP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	KCNK1	O00180	336 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	COCH	O43405	550 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	OR2B3	O76000	313 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	TBX18	O95935	607 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	F11	P03951	625 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	ALDOA	P04075	364 aa	Known RBP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	CD151	P48509	253 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	HCAR3	P49019	387 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	ALDH6A1	Q02252	535 aa	Known RBP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	ITGAD	Q13349	1161 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	GJB7	Q6PEY0	223 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	RHBDF2	Q6PJF5	856 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	TAC4	Q86UU9	113 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	CYP4Z1	Q86W10	505 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	DCAF4L2	Q8NA75	395 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	GAB3	Q8WWW8	586 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	HIC2	Q96JB3	615 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	METTL7A	Q9H8H3	244 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	PREB	Q9HCU5	417 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	POLH	Q9Y253	713 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	KCNK6	Q9Y257	313 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	CHKB	Q9Y259	395 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	ADGRG1	Q9Y653	693 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	MCIDAS	D6RGH6	385 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	LINC01565	O15544	149 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	CILP	O75339	1184 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	AKAP3	O75969	853 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	IL33	O95760	270 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	MC4R	P32245	332 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	SKIV2L2	P42285	1042 aa	Known RBP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	C1D	Q13901	141 aa	Known RBP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	EFTUD2	Q15029	972 aa	Known RBP eCLIP	5.87	□□□□□ -1.47	1e-7	■■■□□ 15.1
STRBP-204	ENST00000447404	ZNF805	Q5CZA5	627 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404		Q6ZSR6	202 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	UBE2J2	Q8N2K1	259 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	PHF21A	Q96BD5	680 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	MRPL48	Q96GC5	212 aa	Known RBP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	RADIL	Q96JH8	1075 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	ZFR	Q96KR1	1074 aa	Known RBP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	MYCBP	Q99417	103 aa	Predicted RBP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	YIPF4	Q9BSR8	244 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	CCDC177	Q9NQR7	707 aa	Predicted RBP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	DUSP12	Q9UNI6	340 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	RNF103	O00237	685 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	TLX3	O43711	291 aa	Predicted RBP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	PPP1R11	O60927	126 aa	Predicted RBP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	USP12	O75317	370 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	ERAL1	O75616	437 aa	Known RBP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404		P04436	131 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	RPLP0	P05388	317 aa	Known RBP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	CLCNKA	P51800	687 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	ZNF143	P52747	638 aa	Predicted RBP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	MAX	P61244	160 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	MRPS15	P82914	257 aa	Known RBP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	FUT2	Q10981	343 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	ZNF155	Q12901	538 aa	Predicted RBP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	PPP1R3B	Q86XI6	285 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	RBM12B	Q8IXT5	1001 aa	Known RBP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	HAS1	Q92839	578 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	KCNK16	Q96T55	309 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	EPB41L1	Q9H4G0	881 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	KLRF1	Q9NZS2	232 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	TBK1	Q9UHD2	729 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	MAPRE3	Q9UPY8	281 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	WASHC1	A8K0Z3	465 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	WASH3P	C4AMC7	463 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	GRID2	O43424	1007 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	POLD2	P49005	469 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	DAOA	P59103	153 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	LAPTM5	Q13571	262 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	SLC9A5	Q14940	896 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	ZACN	Q401N2	412 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	WASH2P	Q6VEQ5	465 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	NPAS3	Q8IXF0	933 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	TP53INP2	Q8IXH6	220 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	CACNA2D3	Q8IZS8	1091 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	NKAP	Q8N5F7	415 aa	Known RBP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	CLP1	Q92989	425 aa	Known RBP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	MIEF2	Q96C03	454 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	RIOK2	Q9BVS4	552 aa	Known RBP	5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	LGR4	Q9BXB1	951 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	ULBP3	Q9BZM4	244 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	VCX3B	Q9H321	246 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	RAD21L1	Q9H4I0	556 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	PTGES2	Q9H7Z7	377 aa		5.87	□□□□□ -1.47
STRBP-204	ENST00000447404	B3GAT2	Q9NPZ5	323 aa		5.87	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms