RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 E7ENX8 843 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 F5H6K3 240 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 H7C2Y5 167 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 hCG_1984214I3L0E3 225 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ACOX3O15254 700 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 LRRN2O75325 713 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 TOM1L1O75674 476 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 APOL3O95236 402 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 PLATP00750 562 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 PGRP06401 933 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ATP5BP06576 529 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 FCER2P06734 321 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ENO3P13929 434 aaPredicted RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 RAB3AP20336 220 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 BGNP21810 368 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 MAOBP27338 520 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 STAT1P42224 750 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 MCAMP43121 646 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 MAGEA11P43364 429 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 RPP30P78346 268 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 SLC18A2Q05940 514 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 FOXC1Q12948 553 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 SMAD4Q13485 552 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 ART3Q13508 389 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 UBAP2LQ14157 1087 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 VEPH1Q14D04 833 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 SLC1A5Q15758 541 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 RAB30Q15771 203 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 RALGPS1Q5JS13 557 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ATAD3CQ5T2N8 411 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 PM20D1Q6GTS8 502 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 JADE1Q6IE81 842 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 TATDN1Q6P1N9 297 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.78□□□□□ -1.96
LIG4-203ENST00000442234 AGMOQ6ZNB7 445 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 CCDC149Q6ZUS6 474 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 DENND5BQ6ZUT9 1274 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 CYFIP1Q7L576 1253 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 FRMD5Q7Z6J6 570 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 MB21D2Q8IYB1 491 aaPredicted RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 ATG16L2Q8NAA4 619 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 SLC37A3Q8NCC5 494 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 TPCN2Q8NHX9 752 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 FBXO27Q8NI29 283 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 METTL6Q8TCB7 284 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 NSUN6Q8TEA1 469 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 TRAPPC12Q8WVT3 735 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 RSAD2Q8WXG1 361 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 SMG7Q92540 1137 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 TTC9Q92623 222 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 MYDGFQ969H8 173 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 NXPE3Q969Y0 559 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ACDQ96AP0 544 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 NXNL1Q96CM4 212 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 SGTBQ96EQ0 304 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ZDHHC12Q96GR4 267 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 SH3YL1Q96HL8 342 aaPredicted RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 TEPSINQ96N21 525 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 FAM193BQ96PV7 902 aaPredicted RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 C6orf62Q9GZU0 229 aaPredicted RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 RACGAP1Q9H0H5 632 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 UPF3AQ9H1J1 476 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 UBE2ZQ9H832 354 aaPredicted RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 EFCAB1Q9HAE3 211 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 PLSCR3Q9NRY6 295 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 KCNH7Q9NS40 1196 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ZDHHC18Q9NUE0 388 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 SPATA6Q9NWH7 488 aaPredicted RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 HPF1Q9NWY4 346 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ZNF624Q9P2J8 865 aaPredicted RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 PCDHGB4Q9UN71 923 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ABCG2Q9UNQ0 655 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 AKT3Q9Y243 479 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 PRELID3BQ9Y3B1 194 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 HSPB11Q9Y547 144 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 PCDHGB5Q9Y5G0 923 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 HRH3Q9Y5N1 445 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 H3BMM5 538 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 STX16-NPEPL1H3BU86 382 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 WRBO00258 174 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 SH2B2O14492 632 aaPredicted RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 SLC22A1O15245 554 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 DCXO43602 365 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 NBNO60934 754 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 PSIP1O75475 530 aaKnown RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 MED26O95402 600 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 GUCA1CO95843 209 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 CDK1P06493 297 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 FABP1P07148 127 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 PIM1P11309 404 aaPredicted RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 SFTPCP11686 197 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 IL7P13232 177 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 HPGDP15428 266 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 ZNF16P17020 682 aaPredicted RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 TMEM11P17152 192 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 OGNP20774 298 aaKnown RBP2.77□□□□□ -1.97
LIG4-203ENST00000442234 PIK3R1P27986 724 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 PDHA2P29803 388 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 TECP42680 631 aa2.77□□□□□ -1.97
LIG4-203ENST00000442234 HCAR3P49019 387 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms