RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 DGKBQ9Y6T7 804 aa14.99□□□□□ -0.01
CSNK1E-210ENST00000442216 F5H423 210 aaPredicted RBP14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 K7ESM1 405 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 PPFIA2O75334 1257 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 RASGRP1O95267 797 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 METTL18O95568 372 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 SOD1P00441 154 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 AGTP01019 485 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 TCP1P17987 556 aaKnown RBP14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 HK3P52790 923 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 CDK3Q00526 305 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 SNX1Q13596 522 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 TRIP6Q15654 476 aaKnown RBP14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 ZDHHC20Q5W0Z9 365 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 PDPK2PQ6A1A2 396 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 PSAPL1Q6NUJ1 521 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 KDM7AQ6ZMT4 941 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 HEATR4Q86WZ0 1026 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 PHACTR4Q8IZ21 702 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 PELI3Q8N2H9 469 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 SLC25A45Q8N413 288 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 SLC25A41Q8N5S1 370 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 OR56A4Q8NGH8 313 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 DTX3LQ8TDB6 740 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 ACTRT1Q8TDG2 376 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 PLEKHG4BQ96PX9 1271 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 WDR24Q96S15 920 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 C19orf43Q9BQ61 176 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 TBL1YQ9BQ87 522 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 FICDQ9BVA6 458 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 DUSP23Q9BVJ7 150 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 SLC13A1Q9BZW2 595 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 LRRC40Q9H9A6 602 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 PAK5Q9P286 719 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 SPASTQ9UBP0 616 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 KLQ9UEF7 1012 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 CD84Q9UIB8 345 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 KLF15Q9UIH9 416 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 SHOC2Q9UQ13 582 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 BTBD3Q9Y2F9 522 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 SPO11Q9Y5K1 396 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 MYLKQ15746 1914 aa14.98□□□□□ -0.01
CSNK1E-210ENST00000442216 GOLGA8CPA6NN73 597 aa14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 PGRMC1O00264 195 aaKnown RBP14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 TPP1O14773 563 aa14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 SCAMP1O15126 338 aa14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 AQP9O43315 295 aa14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 AP2A1O95782 977 aa14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 TNFP01375 233 aa14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 PIRTP0C851 137 aa14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 CHRNA4P43681 627 aa14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 SRP54P61011 504 aaKnown RBP14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 ALG11Q2TAA5 492 aa14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 HS1BP3Q53T59 392 aa14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 ZNF542PQ5EBM4 170 aa14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 FAXCQ5TGI0 409 aa14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 RFLNAQ6ZTI6 216 aa14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 GLT6D1Q7Z4J2 308 aa14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 LINC00523Q86TU6 105 aa14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 FSTL5Q8N475 847 aaPredicted RBP14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 TTC30BQ8N4P2 665 aa14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 CCDC89Q8N998 374 aa14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 ZNF548Q8NEK5 533 aaPredicted RBP14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 OR4C6Q8NH72 309 aa14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 SCAMP4Q969E2 229 aa14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 HIC2Q96JB3 615 aa14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 CAMK1GQ96NX5 476 aa14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 ZSCAN5AQ9BUG6 496 aa14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 RIOK2Q9BVS4 552 aaKnown RBP14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 LGR4Q9BXB1 951 aa14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 NLGN3Q9NZ94 848 aa14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 APOBEC3BQ9UH17 382 aaKnown RBP14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 PNMA8BQ9ULN7 279 aaPredicted RBP14.97□□□□□ -0.01
CSNK1E-210ENST00000442216 TMEM202A6NGA9 273 aa14.96□□□□□ -0.01
CSNK1E-210ENST00000442216 GIPC1O14908 333 aa14.96□□□□□ -0.01
CSNK1E-210ENST00000442216 TNFSF14O43557 240 aa14.96□□□□□ -0.01
CSNK1E-210ENST00000442216 SDC3O75056 442 aa14.96□□□□□ -0.01
CSNK1E-210ENST00000442216 IFNB1P01574 187 aa14.96□□□□□ -0.01
CSNK1E-210ENST00000442216 ALPPL2P10696 532 aa14.96□□□□□ -0.01
CSNK1E-210ENST00000442216 GNG11P61952 73 aa14.96□□□□□ -0.01
CSNK1E-210ENST00000442216 PDE1BQ01064 536 aa14.96□□□□□ -0.01
CSNK1E-210ENST00000442216 MSLNQ13421 630 aaPredicted RBP14.96□□□□□ -0.01
CSNK1E-210ENST00000442216 TAF1AQ15573 450 aaPredicted RBP14.96□□□□□ -0.01
CSNK1E-210ENST00000442216 CYP1B1Q16678 543 aa14.96□□□□□ -0.01
CSNK1E-210ENST00000442216 PAPD7Q5XG87 772 aaKnown RBP14.96□□□□□ -0.01
CSNK1E-210ENST00000442216 TRAM1L1Q8N609 369 aa14.96□□□□□ -0.01
CSNK1E-210ENST00000442216 PRELID2Q8N945 189 aa14.96□□□□□ -0.01
CSNK1E-210ENST00000442216 GPR26Q8NDV2 337 aa14.96□□□□□ -0.01
CSNK1E-210ENST00000442216 BRSK1Q8TDC3 778 aa14.96□□□□□ -0.01
CSNK1E-210ENST00000442216 BLOC1S5Q8TDH9 187 aa14.96□□□□□ -0.01
CSNK1E-210ENST00000442216 COX14Q96I36 57 aa14.96□□□□□ -0.01
CSNK1E-210ENST00000442216 FRMD8Q9BZ67 464 aaPredicted RBP14.96□□□□□ -0.01
CSNK1E-210ENST00000442216 UCKL1Q9NWZ5 548 aa14.96□□□□□ -0.01
CSNK1E-210ENST00000442216 IL17CQ9P0M4 197 aa14.96□□□□□ -0.01
CSNK1E-210ENST00000442216 FTSJ1Q9UET6 329 aa14.96□□□□□ -0.01
CSNK1E-210ENST00000442216 PLXNB3Q9ULL4 1909 aa14.96□□□□□ -0.02
CSNK1E-210ENST00000442216 PRSS38A1L453 326 aa14.95□□□□□ -0.02
CSNK1E-210ENST00000442216 AURKAO14965 403 aa14.95□□□□□ -0.02
CSNK1E-210ENST00000442216 LDOC1O95751 146 aaPredicted RBP14.95□□□□□ -0.02
CSNK1E-210ENST00000442216 GIMD1P0DJR0 217 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms