RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 TTPALQ9BTX7 342 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 OSGEPL1Q9H4B0 414 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 PPM1AP35813 382 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 NUMBP49757 651 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 LIN52Q52LA3 116 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 FBXL19Q6PCT2 694 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 TAC4Q86UU9 113 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 C11orf74Q86VG3 221 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 OFCC1Q8IZS5 231 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 MPP5Q8N3R9 675 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 EFCAB3Q8N7B9 438 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 BPIFB6Q8NFQ5 453 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 PNPT1Q8TCS8 783 aaKnown RBP12.87□□□□□ -0.35
BRPF3-203ENST00000441123 DPF3Q92784 378 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 BORCS5Q969J3 196 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 RBM4BQ9BQ04 359 aaKnown RBP12.87□□□□□ -0.35
BRPF3-203ENST00000441123 RBM4Q9BWF3 364 aaKnown RBP12.87□□□□□ -0.35
BRPF3-203ENST00000441123 GATA5Q9BWX5 397 aaPredicted RBP12.87□□□□□ -0.35
BRPF3-203ENST00000441123 SERHL2Q9H4I8 314 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 SERHLQ9NQF3 203 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 ASAH2Q9NR71 780 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 ATXN10Q9UBB4 475 aa12.87□□□□□ -0.35
BRPF3-203ENST00000441123 TDRKHQ9Y2W6 561 aaKnown RBP12.87□□□□□ -0.35
BRPF3-203ENST00000441123 IRGMA1A4Y4 181 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 C2orf71A6NGG8 1288 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 RFXANKO14593 260 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 RSBN1Q5VWQ0 802 aaPredicted RBP12.86□□□□□ -0.35
BRPF3-203ENST00000441123 SLC9A4Q6AI14 798 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 ZNF781Q8N8C0 355 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 TMEM39AQ9NV64 488 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 IFT80Q9P2H3 777 aaPredicted RBP12.86□□□□□ -0.35
BRPF3-203ENST00000441123 ALOX5P09917 674 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 GNPDA1P46926 289 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 KHDC1Q4VXA5 237 aaKnown RBP12.86□□□□□ -0.35
BRPF3-203ENST00000441123 XKR6Q5GH73 641 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 RHBDF2Q6PJF5 856 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 C10orf53Q8N6V4 93 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 PLD4Q96BZ4 506 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 PCED1BQ96HM7 432 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 KLHL5Q96PQ7 755 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 LENG8Q96PV6 779 aaPredicted RBP12.86□□□□□ -0.35
BRPF3-203ENST00000441123 GOLGA2P5Q9HBQ8 144 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 CNTN3Q9P232 1028 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 GNEQ9Y223 722 aaKnown RBP12.86□□□□□ -0.35
BRPF3-203ENST00000441123 SERPINI2O75830 405 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 NMBRP28336 390 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 ZNF33AQ06730 810 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 TRIM25Q14258 630 aaKnown RBP12.86□□□□□ -0.35
BRPF3-203ENST00000441123 SLC39A4Q6P5W5 647 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 FAM92BQ6ZTR7 304 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 SLC24A5Q71RS6 500 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 ZBTB2Q8N680 514 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 ZNF655Q8N720 491 aaPredicted RBP12.86□□□□□ -0.35
BRPF3-203ENST00000441123 CXorf40AQ8TE69 158 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 PACSIN3Q9UKS6 424 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 SLC45A1Q9Y2W3 748 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 KCNU1A8MYU2 1149 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 FFAR3O14843 346 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 GPR42O15529 346 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 DUSP11O75319 330 aaKnown RBP12.86□□□□□ -0.35
BRPF3-203ENST00000441123 CLCQ05315 142 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 RFTN1Q14699 578 aaPredicted RBP12.86□□□□□ -0.35
BRPF3-203ENST00000441123 PLCL1Q15111 1095 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 EPHX4Q8IUS5 362 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 SVOPLQ8N434 492 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 ZNF540Q8NDQ6 660 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 DDX1Q92499 740 aaKnown RBP12.86□□□□□ -0.35
BRPF3-203ENST00000441123 TOP1MTQ969P6 601 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 CENPNQ96H22 339 aaPredicted RBP12.86□□□□□ -0.35
BRPF3-203ENST00000441123 CLPTM1LQ96KA5 538 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 PLEKHG4BQ96PX9 1271 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 BRD9Q9H8M2 597 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 GMIPQ9P107 970 aa12.86□□□□□ -0.35
BRPF3-203ENST00000441123 SCELO95171 688 aa12.85□□□□□ -0.35
BRPF3-203ENST00000441123 NOVP48745 357 aa12.85□□□□□ -0.35
BRPF3-203ENST00000441123 ACTR3P61158 418 aa12.85□□□□□ -0.35
BRPF3-203ENST00000441123 MPP1Q00013 466 aa12.85□□□□□ -0.35
BRPF3-203ENST00000441123 C6orf89Q6UWU4 347 aa12.85□□□□□ -0.35
BRPF3-203ENST00000441123 CLP1Q92989 425 aaKnown RBP12.85□□□□□ -0.35
BRPF3-203ENST00000441123 MFSD3Q96ES6 412 aa12.85□□□□□ -0.35
BRPF3-203ENST00000441123 PANX1Q96RD7 426 aa12.85□□□□□ -0.35
BRPF3-203ENST00000441123 SEZ6LQ9BYH1 1024 aa12.85□□□□□ -0.35
BRPF3-203ENST00000441123 OSBPL2Q9H1P3 480 aa12.85□□□□□ -0.35
BRPF3-203ENST00000441123 NOL11Q9H8H0 719 aaKnown RBP12.85□□□□□ -0.35
BRPF3-203ENST00000441123 ZFP14Q9HCL3 533 aa12.85□□□□□ -0.35
BRPF3-203ENST00000441123 PSME2Q9UL46 239 aa12.85□□□□□ -0.35
BRPF3-203ENST00000441123 SESN1Q9Y6P5 492 aa12.85□□□□□ -0.35
BRPF3-203ENST00000441123 ZNF536O15090 1300 aa12.85□□□□□ -0.35
BRPF3-203ENST00000441123 MSI1O43347 362 aaKnown RBP12.85□□□□□ -0.35
BRPF3-203ENST00000441123 SMPD1P17405 629 aa12.85□□□□□ -0.35
BRPF3-203ENST00000441123 TSPAN8P19075 237 aa12.85□□□□□ -0.35
BRPF3-203ENST00000441123 ASMTP46597 345 aa12.85□□□□□ -0.35
BRPF3-203ENST00000441123 CAPZA2P47755 286 aa12.85□□□□□ -0.35
BRPF3-203ENST00000441123 PNLIPRP1P54315 467 aa12.85□□□□□ -0.35
BRPF3-203ENST00000441123 NCBP2-AS2Q69YL0 99 aa12.85□□□□□ -0.35
BRPF3-203ENST00000441123 ARHGAP36Q6ZRI8 547 aa12.85□□□□□ -0.35
BRPF3-203ENST00000441123 TRAPPC5Q8IUR0 188 aa12.85□□□□□ -0.35
BRPF3-203ENST00000441123 PYROXD2Q8N2H3 581 aa12.85□□□□□ -0.35
BRPF3-203ENST00000441123 LPGAT1Q92604 370 aa12.85□□□□□ -0.35
BRPF3-203ENST00000441123 RNFT2Q96EX2 444 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms