RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 USP36Q9P275 1121 aaKnown RBP4.98□□□□□ -1.61
CCDC140-202ENST00000440903 SUSD2Q9UGT4 822 aa4.98□□□□□ -1.61
CCDC140-202ENST00000440903 EBF1Q9UH73 591 aa4.98□□□□□ -1.61
CCDC140-202ENST00000440903 APPL1Q9UKG1 709 aa4.98□□□□□ -1.61
CCDC140-202ENST00000440903 DMTF1Q9Y222 760 aa4.98□□□□□ -1.61
CCDC140-202ENST00000440903 NEU2Q9Y3R4 380 aa4.98□□□□□ -1.61
CCDC140-202ENST00000440903 TCAF1Q9Y4C2 921 aa4.98□□□□□ -1.61
CCDC140-202ENST00000440903 SLC30A1Q9Y6M5 507 aa4.98□□□□□ -1.61
CCDC140-202ENST00000440903 COL6A3P12111 3177 aa4.98□□□□□ -1.61
CCDC140-202ENST00000440903 CHD5Q8TDI0 1954 aa4.98□□□□□ -1.61
CCDC140-202ENST00000440903 GLYATL1P3A0A0U1RQE8 302 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 LOC285095A0A1B0GVY8 99 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 A0A1W2PQU0 124 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 ESYT3A0FGR9 886 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 FAM86C2PA6NEL3 165 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 NPIPB15A6NHN6 443 aaPredicted RBP4.97□□□□□ -1.61
CCDC140-202ENST00000440903 SHISA7A6NL88 538 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 DLL1O00548 723 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 FPGTO14772 594 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 WNT9AO14904 365 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 FZD6O60353 706 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 GPR37L1O60883 481 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 RNGTTO60942 597 aaKnown RBP4.97□□□□□ -1.61
CCDC140-202ENST00000440903 GJB3O75712 270 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 RPP40O75818 363 aaKnown RBP4.97□□□□□ -1.61
CCDC140-202ENST00000440903 TMEM63AO94886 807 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 FSBPO95073 299 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 AGTP01019 485 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 IGLV3-19P01714 112 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 IVLP07476 585 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 GSTA2P09210 222 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 ALPIP09923 528 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 FBXO45P0C2W1 286 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 ATXN1LP0C7T5 689 aaKnown RBP4.97□□□□□ -1.61
CCDC140-202ENST00000440903 ARAFP10398 606 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 RALBP11234 206 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 C6P13671 934 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 GNSP15586 552 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 TSHRP16473 764 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 HNRNPA2B1P22626 353 aaKnown RBP4.97□□□□□ -1.61
CCDC140-202ENST00000440903 ADRA1DP25100 572 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 MGAT1P26572 445 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 TNFRSF8P28908 595 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 STX2P32856 288 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 ADRA1AP35348 466 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 HNF1BP35680 557 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 HMGCLP35914 325 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 ABL2P42684 1182 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 FNTBP49356 437 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 LIG3P49916 1009 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 CCR5P51681 352 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 MRPS25P82663 173 aaKnown RBP4.97□□□□□ -1.61
CCDC140-202ENST00000440903 CTBSQ01459 385 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 ILF2Q12905 390 aaKnown RBP4.97□□□□□ -1.61
CCDC140-202ENST00000440903 PDIA2Q13087 525 aaKnown RBP4.97□□□□□ -1.61
CCDC140-202ENST00000440903 THOC5Q13769 683 aaKnown RBP4.97□□□□□ -1.61
CCDC140-202ENST00000440903 ITGA9Q13797 1035 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 GTF2H3Q13889 308 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 ANGPT1Q15389 498 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 TEAD4Q15561 434 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 TAF1AQ15573 450 aaPredicted RBP4.97□□□□□ -1.61
CCDC140-202ENST00000440903 CNGA3Q16281 694 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 MAP7D1Q3KQU3 841 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 TMEM52BQ4KMG9 183 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 CCDC38Q502W7 563 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 FASTKD1Q53R41 847 aaKnown RBP4.97□□□□□ -1.61
CCDC140-202ENST00000440903 LRRC73Q5JTD7 316 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 SPANXN3Q5MJ09 141 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 PIP5KL1Q5T9C9 394 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 RNF187Q5TA31 235 aaPredicted RBP4.97□□□□□ -1.61
CCDC140-202ENST00000440903 LYSMD4Q5XG99 296 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 KIAA0895LQ68EN5 471 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 KCTD11Q693B1 232 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 PDPK2PQ6A1A2 396 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 RAET1GQ6H3X3 334 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 EMBQ6PCB8 327 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 RANBP10Q6VN20 620 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 ZNF765Q7L2R6 523 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 TAOK1Q7L7X3 1001 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 PRUNE1Q86TP1 453 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 WDR5BQ86VZ2 330 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 TRIM69Q86WT6 500 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 HORMAD1Q86X24 394 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 PHYKPLQ8IUZ5 450 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 PALM2Q8IXS6 379 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 LMNTD2Q8IXW0 634 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 ZBED8Q8IZ13 594 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 NRSN1Q8IZ57 195 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 RGL4Q8IZJ4 473 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 AADATQ8N5Z0 425 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.97□□□□□ -1.61
CCDC140-202ENST00000440903 CADM4Q8NFZ8 388 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 BRSK1Q8TDC3 778 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 PYROXD1Q8WU10 500 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 STYXQ8WUJ0 223 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 PIH1D2Q8WWB5 315 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 GAB3Q8WWW8 586 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 TADA1Q96BN2 335 aa4.97□□□□□ -1.61
CCDC140-202ENST00000440903 ZNF669Q96BR6 464 aaPredicted RBP4.97□□□□□ -1.61
CCDC140-202ENST00000440903 ULK4Q96C45 1275 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms