RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 SPEGQ15772 3267 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 APOC4-APOC2K7ER74 178 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 INPP4BO15327 924 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 MTSS1O43312 755 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 OPA1O60313 960 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 FTCDO95954 541 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 SOD1P00441 154 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 APOC2P02655 101 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 CEACAM5P06731 702 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 PYGMP11217 842 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 GNPDA1P46926 289 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 RPIAP49247 311 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 GSDMDP57764 484 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 OTUD4Q01804 1114 aaKnown RBP13.69□□□□□ -0.22
LTBR-202ENST00000440421 CDK18Q07002 472 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 CAMK2BQ13554 666 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 NOMO1Q15155 1222 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 PID1Q7Z2X4 250 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 LYSMD3Q7Z3D4 306 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 TAF8Q7Z7C8 310 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 TRIM74Q86UV6 250 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 NRSN1Q8IZ57 195 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 ZNF567Q8N184 647 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 KYQ8NBH2 561 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 CCL4L1Q8NHW4 92 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 MDM1Q8TC05 714 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 ACTL9Q8TC94 416 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 MAPK15Q8TD08 544 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 CCHCR1Q8TD31 782 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 PTCD2Q8WV60 388 aaKnown RBP13.69□□□□□ -0.22
LTBR-202ENST00000440421 HTR3CQ8WXA8 447 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 TADA1Q96BN2 335 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 FRMD8Q9BZ67 464 aaPredicted RBP13.69□□□□□ -0.22
LTBR-202ENST00000440421 CCDC86Q9H6F5 360 aaKnown RBP13.69□□□□□ -0.22
LTBR-202ENST00000440421 CARS2Q9HA77 564 aaKnown RBP13.69□□□□□ -0.22
LTBR-202ENST00000440421 SHOC2Q9UQ13 582 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 CLCA2Q9UQC9 943 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 TMEM98Q9Y2Y6 226 aa13.69□□□□□ -0.22
LTBR-202ENST00000440421 EME2A4GXA9 379 aaPredicted RBP13.68□□□□□ -0.22
LTBR-202ENST00000440421 HACD1B0YJ81 288 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 MT-CO3P00414 261 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 FUCA1P04066 466 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 GP1BAP07359 652 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 TEAD1P28347 426 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 RBL1P28749 1068 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 CETN2P41208 172 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 SPINT3P49223 89 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 XRCC4Q13426 336 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 SLC14A2Q15849 920 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 PERM1Q5SV97 790 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 CCDC70Q6NSX1 233 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 LVRNQ6Q4G3 990 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 ADAMTSL4Q6UY14 1074 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 ZNF765Q7L2R6 523 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 SYCE1Q8N0S2 351 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 SDR16C5Q8N3Y7 309 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 PDCD7Q8N8D1 485 aaKnown RBP13.68□□□□□ -0.22
LTBR-202ENST00000440421 ARL10Q8N8L6 244 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 FAM46DQ8NEK8 389 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 VAT1Q99536 393 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 ZFYVE1Q9HBF4 777 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 PKD2L2Q9NZM6 624 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 FAM153AQ9UHL3 310 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 PADI4Q9UM07 663 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 SUFUQ9UMX1 484 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 ZNF711Q9Y462 761 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 CAPN6Q9Y6Q1 641 aa13.68□□□□□ -0.22
LTBR-202ENST00000440421 GOLGA4Q13439 2230 aaKnown RBP13.67□□□□□ -0.22
LTBR-202ENST00000440421 MYLKQ15746 1914 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 B4DGG1 531 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 TJP3O95049 919 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 ASMTLO95671 621 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 NDST3O95803 873 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 PTMAP06454 111 aaKnown RBP13.67□□□□□ -0.22
LTBR-202ENST00000440421 PTPN7P35236 360 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 WNT3AP56704 352 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 EIF3EP60228 445 aaKnown RBP13.67□□□□□ -0.22
LTBR-202ENST00000440421 CYP4F3Q08477 520 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 ALS2CLQ60I27 953 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 MARK2Q7KZI7 788 aaKnown RBP13.67□□□□□ -0.22
LTBR-202ENST00000440421 CDKL3Q8IVW4 592 aaPredicted RBP13.67□□□□□ -0.22
LTBR-202ENST00000440421 SFTPA2Q8IWL1 248 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 SLC25A41Q8N5S1 370 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 UBL4BQ8N7F7 174 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 EID2BQ96D98 161 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 OXNAD1Q96HP4 312 aaPredicted RBP13.67□□□□□ -0.22
LTBR-202ENST00000440421 HIC2Q96JB3 615 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 WDR24Q96S15 920 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 GPR63Q9BZJ6 419 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 DPEP2Q9H4A9 486 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 FAM83DQ9H4H8 585 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 SYNDIG1Q9H7V2 258 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 RSPH14Q9UHP6 348 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 SLC17A4Q9Y2C5 497 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 EFR3BQ9Y2G0 817 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 GPSM3Q9Y4H4 160 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 SPO11Q9Y5K1 396 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 ADGRG1Q9Y653 693 aa13.67□□□□□ -0.22
LTBR-202ENST00000440421 FADS2P1A8MWK0 482 aa13.66□□□□□ -0.22
LTBR-202ENST00000440421 MIF4GDA9UHW6 222 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms