RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 CD70P32970 193 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 CRHR1P34998 444 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 MTHFRP42898 656 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 ARCN1P48444 511 aaKnown RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 LIG3P49916 1009 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 SERPINB8P50452 374 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 ST13P50502 369 aaKnown RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 EPHB1P54762 984 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 POLR2LP62875 67 aaKnown RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 ACVR1Q04771 509 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 BCL2L1Q07817 233 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 LMAN2Q12907 356 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 MSLNQ13421 630 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 ADAM15Q13444 863 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 OLIG2Q13516 323 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 KCNC3Q14003 757 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 SEPT6Q14141 434 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 EFTUD2Q15029 972 aaKnown RBP eCLIP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 DHCR24Q15392 516 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 TAF1AQ15573 450 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 CNGA3Q16281 694 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 INSCQ1MX18 579 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 MYLK3Q32MK0 819 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 PREPLQ4J6C6 727 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 HSP90AA5PQ58FG0 334 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 FAM78AQ5JUQ0 283 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 LY6G5CQ5SRR4 150 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 RARS2Q5T160 578 aaKnown RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 FAM182AQ5T1J6 154 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 TSTD2Q5T7W7 516 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 ARMC12Q5T9G4 340 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 MRNIPQ6NTE8 343 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 NEPROQ6NW34 567 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 NCEH1Q6PIU2 408 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 LINGO4Q6UY18 593 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 PACS1Q6VY07 963 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 KYAT3Q6YP21 454 aaKnown RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 TPGS1Q6ZTW0 290 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 KDELC2Q7Z4H8 507 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 SPRED2Q7Z698 418 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 KIAA0907Q7Z7F0 614 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 CPLX4Q7Z7G2 160 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 GALNT7Q86SF2 657 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 PDZD3Q86UT5 571 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 TMEM25Q86YD3 366 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 CNTN4Q8IWV2 1026 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 TRIM42Q8IWZ5 723 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 YAF2Q8IY57 180 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 APCDD1Q8J025 514 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 AHI1Q8N157 1196 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 RYBPQ8N488 228 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 CPA6Q8N4T0 437 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 SLC25A41Q8N5S1 370 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 PAF1Q8N7H5 531 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 C12orf76Q8N812 135 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 BANPQ8N9N5 519 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 KDM1BQ8NB78 822 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 OR52K2Q8NGK3 314 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 GPR150Q8NGU9 434 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 OR6P1Q8NGX9 317 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 ITFG1Q8TB96 612 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 MDM1Q8TC05 714 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 BPIFB1Q8TDL5 484 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 HCAR2Q8TDS4 363 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 DENND1AQ8TEH3 1009 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 GDPD5Q8WTR4 605 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 MZB1Q8WU39 189 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 STYXQ8WUJ0 223 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 OSCP1Q8WVF1 389 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 ING5Q8WYH8 240 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 FGF13Q92913 245 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 MFSD3Q96ES6 412 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 WDR89Q96FK6 387 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 TSPAN17Q96FV3 270 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 APOPT1Q96IL0 206 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 LRIG1Q96JA1 1093 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 LMLNQ96KR4 655 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 MAGEB18Q96M61 343 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 RIPOR3Q96MK2 946 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 ZNF641Q96N77 438 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 TSNARE1Q96NA8 513 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 NECTIN4Q96NY8 510 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 RBBP8Q99708 897 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 TDRD1Q9BXT4 1180 aaKnown RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 CPEB1Q9BZB8 566 aaKnown RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 NSRP1Q9H0G5 558 aaKnown RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 VPS11Q9H270 941 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 LINC00597Q9H2U6 94 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 RHOJQ9H4E5 214 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 CCDC134Q9H6E4 229 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 CCDC86Q9H6F5 360 aaKnown RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 ATP13A3Q9H7F0 1226 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 IARS2Q9NSE4 1012 aaKnown RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 TREX1Q9NSU2 369 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 NLE1Q9NVX2 485 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 PIH1D1Q9NWS0 290 aaKnown RBP3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 MKS1Q9NXB0 559 aa3.98□□□□□ -1.77
HMGB1P37-201ENST00000439613 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms