RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 BROXQ5VW32 411 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 TXNDC11Q6PKC3 985 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 LARP4Q71RC2 724 aaKnown RBP eCLIP13.37□□□□□ -0.27
ACTN1-204ENST00000438964 ZCCHC7Q8N3Z6 543 aaKnown RBP13.37□□□□□ -0.27
ACTN1-204ENST00000438964 CENPIQ92674 756 aaPredicted RBP13.37□□□□□ -0.27
ACTN1-204ENST00000438964 RPL3LQ92901 407 aaKnown RBP13.37□□□□□ -0.27
ACTN1-204ENST00000438964 PPM1MQ96MI6 270 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 MRPL57Q9BQC6 102 aaKnown RBP13.37□□□□□ -0.27
ACTN1-204ENST00000438964 MCMBPQ9BTE3 642 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 TOR3AQ9H497 397 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 MRPL40Q9NQ50 206 aaKnown RBP13.37□□□□□ -0.27
ACTN1-204ENST00000438964 COL11A2P13942 1736 aaPredicted RBP13.37□□□□□ -0.27
ACTN1-204ENST00000438964 CNTN5O94779 1100 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 LRIG2O94898 1065 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 FKBP1AP62942 108 aaKnown RBP13.37□□□□□ -0.27
ACTN1-204ENST00000438964 KCNC4Q03721 635 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 PFKFB4Q16877 469 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 CTU2Q2VPK5 515 aaKnown RBP13.37□□□□□ -0.27
ACTN1-204ENST00000438964 NOL9Q5SY16 702 aaKnown RBP13.37□□□□□ -0.27
ACTN1-204ENST00000438964 DEPDC1Q5TB30 811 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 KCTD11Q693B1 232 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 FAM45BPQ6NSW5 357 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 SLC16A12Q6ZSM3 486 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 CATSPER4Q7RTX7 472 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 RBM23Q86U06 439 aaKnown RBP13.37□□□□□ -0.27
ACTN1-204ENST00000438964 ANKRD13AQ8IZ07 590 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 FBXO30Q8TB52 745 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 CNIH3Q8TBE1 160 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 FAM45AQ8TCE6 357 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 TMBIM1Q969X1 311 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 BIRC7Q96CA5 298 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 SPATA33Q96N06 139 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 GSTO2Q9H4Y5 243 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 VRTNQ9H8Y1 702 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 SEMA4BQ9NPR2 832 aaPredicted RBP13.37□□□□□ -0.27
ACTN1-204ENST00000438964 ANAPC2Q9UJX6 822 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 FBXO5Q9UKT4 447 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 TNFSF13BQ9Y275 285 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 ANKRD6Q9Y2G4 727 aa13.37□□□□□ -0.27
ACTN1-204ENST00000438964 PFDN6O15212 129 aa13.36□□□□□ -0.27
ACTN1-204ENST00000438964 SEC14L2O76054 403 aa13.36□□□□□ -0.27
ACTN1-204ENST00000438964 GGT5P36269 586 aa13.36□□□□□ -0.27
ACTN1-204ENST00000438964 CDH17Q12864 832 aa13.36□□□□□ -0.27
ACTN1-204ENST00000438964 XRRA1Q6P2D8 792 aa13.36□□□□□ -0.27
ACTN1-204ENST00000438964 TMEM207Q6UWW9 146 aa13.36□□□□□ -0.27
ACTN1-204ENST00000438964 SLC22A15Q8IZD6 547 aa13.36□□□□□ -0.27
ACTN1-204ENST00000438964 OR6P1Q8NGX9 317 aa13.36□□□□□ -0.27
ACTN1-204ENST00000438964 TOP1MTQ969P6 601 aa13.36□□□□□ -0.27
ACTN1-204ENST00000438964 SARDHQ9UL12 918 aa13.36□□□□□ -0.27
ACTN1-204ENST00000438964 SLC30A1Q9Y6M5 507 aa13.36□□□□□ -0.27
ACTN1-204ENST00000438964 LAMA2P24043 3122 aaKnown RBP13.36□□□□□ -0.27
ACTN1-204ENST00000438964 A8MV72 311 aaPredicted RBP13.36□□□□□ -0.27
ACTN1-204ENST00000438964 DCLK1O15075 740 aa13.36□□□□□ -0.27
ACTN1-204ENST00000438964 PSMD8P48556 350 aa13.36□□□□□ -0.27
ACTN1-204ENST00000438964 ATP6V0D1P61421 351 aa13.36□□□□□ -0.27
ACTN1-204ENST00000438964 TECRLQ5HYJ1 363 aa13.36□□□□□ -0.27
ACTN1-204ENST00000438964 UBE2UQ5VVX9 321 aa13.36□□□□□ -0.27
ACTN1-204ENST00000438964 SPRED1Q7Z699 444 aa13.36□□□□□ -0.27
ACTN1-204ENST00000438964 KIAA2013Q8IYS2 634 aa13.36□□□□□ -0.27
ACTN1-204ENST00000438964 RAB2BQ8WUD1 216 aa13.36□□□□□ -0.27
ACTN1-204ENST00000438964 PABPC5Q96DU9 382 aaKnown RBP13.36□□□□□ -0.27
ACTN1-204ENST00000438964 ZNF347Q96SE7 839 aa13.36□□□□□ -0.27
ACTN1-204ENST00000438964 ACOX2Q99424 681 aa13.36□□□□□ -0.27
ACTN1-204ENST00000438964 PDGFCQ9NRA1 345 aa13.36□□□□□ -0.27
ACTN1-204ENST00000438964 PAK1IP1Q9NWT1 392 aaPredicted RBP13.36□□□□□ -0.27
ACTN1-204ENST00000438964 PGAP2Q9UHJ9 254 aa13.36□□□□□ -0.27
ACTN1-204ENST00000438964 IGKV6D-21A0A0A0MT36 114 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 UBXN8O00124 270 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 NPHS1O60500 1241 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 PRDX3P30048 256 aaKnown RBP13.35□□□□□ -0.27
ACTN1-204ENST00000438964 MAP3K7CLP57077 242 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 UFM1P61960 85 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 BST2Q10589 180 aaKnown RBP13.35□□□□□ -0.27
ACTN1-204ENST00000438964 SELPLGQ14242 412 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 BCL2A1Q16548 175 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 SLC25A52Q3SY17 297 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 GTF2IRD2BQ6EKJ0 949 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 SPATC1Q76KD6 591 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 GALNT5Q7Z7M9 940 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 GTF2IRD2Q86UP8 949 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 EIF2AQ9BY44 585 aaKnown RBP13.35□□□□□ -0.27
ACTN1-204ENST00000438964 MROQ9BYG7 248 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 DDIT4Q9NX09 232 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 CPA4Q9UI42 421 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 CAB39Q9Y376 341 aaPredicted RBP13.35□□□□□ -0.27
ACTN1-204ENST00000438964 ERI2A8K979 691 aaKnown RBP13.35□□□□□ -0.27
ACTN1-204ENST00000438964 M0R3G1 203 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 DLGAP3O95886 979 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 NEK2P51955 445 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 TMBIM6P55061 237 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 CDKN2DP55273 166 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 MAXP61244 160 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 PPIL2Q13356 520 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 FAM214AQ32MH5 1076 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 C8orf82Q6P1X6 216 aaPredicted RBP13.35□□□□□ -0.27
ACTN1-204ENST00000438964 TWIST2Q8WVJ9 160 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 TEPSINQ96N21 525 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 MYOCQ99972 504 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 RHOBTB2Q9BYZ6 727 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 CEP44Q9C0F1 390 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms