RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 APMAPQ9HDC9 416 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 SAMSN1Q9NSI8 373 aaKnown RBP11.14□□□□□ -0.63
CSTF3-203ENST00000438862 PPARGC1AQ9UBK2 798 aaKnown RBP11.14□□□□□ -0.63
CSTF3-203ENST00000438862 LIMA1Q9UHB6 759 aaKnown RBP11.14□□□□□ -0.63
CSTF3-203ENST00000438862 CROTQ9UKG9 612 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 ZNF451Q9Y4E5 1061 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 PCDHGA6Q9Y5G7 932 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 SNX10Q9Y5X0 201 aa11.14□□□□□ -0.63
CSTF3-203ENST00000438862 HIVEP1P15822 2718 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 ARHGAP10A1A4S6 786 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 A6NCN8 305 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 ZSCAN5CA6NGD5 496 aaPredicted RBP11.13□□□□□ -0.63
CSTF3-203ENST00000438862 P4HA2O15460 535 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 DAB1O75553 588 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 DNAJB5O75953 348 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 TPM2P07951 284 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 CDK11BP21127 795 aaKnown RBP11.13□□□□□ -0.63
CSTF3-203ENST00000438862 ACVRL1P37023 503 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 PPM1FP49593 454 aaPredicted RBP11.13□□□□□ -0.63
CSTF3-203ENST00000438862 SLC6A3Q01959 620 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 DEUP1Q05D60 604 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 ELOAQ14241 798 aaKnown RBP11.13□□□□□ -0.63
CSTF3-203ENST00000438862 GRM3Q14832 879 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 CCDC40Q4G0X9 1142 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 TCP11X2Q5H9J9 407 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 SNAP47Q5SQN1 464 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 ARTNQ5T4W7 220 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 SP5Q6BEB4 398 aaPredicted RBP11.13□□□□□ -0.63
CSTF3-203ENST00000438862 RRAGAQ7L523 313 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 SLC26A9Q7LBE3 791 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 TMEM135Q86UB9 458 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 MCEMP1Q8IX19 187 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 ZNF511Q8NB15 262 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 ZNF397Q8NF99 534 aaPredicted RBP11.13□□□□□ -0.63
CSTF3-203ENST00000438862 PATE1Q8WXA2 126 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 THAP4Q8WY91 577 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 NT5C3BQ969T7 300 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 CPXM1Q96SM3 734 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 SLC38A3Q99624 504 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 LGR4Q9BXB1 951 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 TRIM55Q9BYV6 548 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 ULBP3Q9BZM4 244 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 UNKQ9C0B0 810 aaKnown RBP11.13□□□□□ -0.63
CSTF3-203ENST00000438862 RBSNQ9H1K0 784 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 MAGEH1Q9H213 219 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 PCDH12Q9NPG4 1184 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 STAP1Q9ULZ2 295 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 MED13LQ71F56 2210 aa11.13□□□□□ -0.63
CSTF3-203ENST00000438862 THAP12O43422 761 aa11.12□□□□□ -0.63
CSTF3-203ENST00000438862 RECQL5O94762 991 aaPredicted RBP11.12□□□□□ -0.63
CSTF3-203ENST00000438862 KRT5P13647 590 aa11.12□□□□□ -0.63
CSTF3-203ENST00000438862 FASLGP48023 281 aa11.12□□□□□ -0.63
CSTF3-203ENST00000438862 NR6A1Q15406 480 aa11.12□□□□□ -0.63
CSTF3-203ENST00000438862 MAN2A1Q16706 1144 aa11.12□□□□□ -0.63
CSTF3-203ENST00000438862 PRR30Q53SZ7 412 aaPredicted RBP11.12□□□□□ -0.63
CSTF3-203ENST00000438862 INO80DQ53TQ3 878 aaPredicted RBP11.12□□□□□ -0.63
CSTF3-203ENST00000438862 OTUD1Q5VV17 481 aaPredicted RBP11.12□□□□□ -0.63
CSTF3-203ENST00000438862 PNCKQ6P2M8 343 aa11.12□□□□□ -0.63
CSTF3-203ENST00000438862 SLC30A9Q6PML9 568 aa11.12□□□□□ -0.63
CSTF3-203ENST00000438862 SARM1Q6SZW1 724 aa11.12□□□□□ -0.63
CSTF3-203ENST00000438862 OLFML1Q6UWY5 402 aa11.12□□□□□ -0.63
CSTF3-203ENST00000438862 FAM183BPQ6ZVS7 135 aa11.12□□□□□ -0.63
CSTF3-203ENST00000438862 WDTC1Q8N5D0 677 aa11.12□□□□□ -0.63
CSTF3-203ENST00000438862 Q8NA96 180 aa11.12□□□□□ -0.63
CSTF3-203ENST00000438862 LMO3Q8TAP4 145 aa11.12□□□□□ -0.63
CSTF3-203ENST00000438862 PNPLA2Q96AD5 504 aa11.12□□□□□ -0.63
CSTF3-203ENST00000438862 STAMBPL1Q96FJ0 436 aa11.12□□□□□ -0.63
CSTF3-203ENST00000438862 TUBGCP2Q9BSJ2 902 aa11.12□□□□□ -0.63
CSTF3-203ENST00000438862 SUV39H2Q9H5I1 410 aa11.12□□□□□ -0.63
CSTF3-203ENST00000438862 WDR26Q9H7D7 661 aa11.12□□□□□ -0.63
CSTF3-203ENST00000438862 ACSS2Q9NR19 701 aa11.12□□□□□ -0.63
CSTF3-203ENST00000438862 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.12□□□□□ -0.63
CSTF3-203ENST00000438862 RCOR3Q9P2K3 495 aaPredicted RBP11.12□□□□□ -0.63
CSTF3-203ENST00000438862 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.12□□□□□ -0.63
CSTF3-203ENST00000438862 TSPAN11A1L157 253 aa11.11□□□□□ -0.63
CSTF3-203ENST00000438862 GTPBP10A4D1E9 387 aaKnown RBP11.11□□□□□ -0.63
CSTF3-203ENST00000438862 ANKUB1A6NFN9 424 aa11.11□□□□□ -0.63
CSTF3-203ENST00000438862 KDELR3O43731 214 aa11.11□□□□□ -0.63
CSTF3-203ENST00000438862 TPM3P06753 285 aa11.11□□□□□ -0.63
CSTF3-203ENST00000438862 MYCLP1P12525 358 aaPredicted RBP11.11□□□□□ -0.63
CSTF3-203ENST00000438862 NFKBIAP25963 317 aa11.11□□□□□ -0.63
CSTF3-203ENST00000438862 AK4P27144 223 aaPredicted RBP11.11□□□□□ -0.63
CSTF3-203ENST00000438862 GNA15P30679 374 aa11.11□□□□□ -0.63
CSTF3-203ENST00000438862 MMP12P39900 470 aa11.11□□□□□ -0.63
CSTF3-203ENST00000438862 MTIF2P46199 727 aaKnown RBP11.11□□□□□ -0.63
CSTF3-203ENST00000438862 MAPKAPK2P49137 400 aa11.11□□□□□ -0.63
CSTF3-203ENST00000438862 SULT1E1P49888 294 aa11.11□□□□□ -0.63
CSTF3-203ENST00000438862 CCL11P51671 97 aa11.11□□□□□ -0.63
CSTF3-203ENST00000438862 NDST2P52849 883 aa11.11□□□□□ -0.63
CSTF3-203ENST00000438862 RHOAP61586 193 aa11.11□□□□□ -0.63
CSTF3-203ENST00000438862 CTBSQ01459 385 aa11.11□□□□□ -0.63
CSTF3-203ENST00000438862 CHRNA6Q15825 494 aa11.11□□□□□ -0.63
CSTF3-203ENST00000438862 FILIP1LQ4L180 1135 aa11.11□□□□□ -0.63
CSTF3-203ENST00000438862 BRAT1Q6PJG6 821 aa11.11□□□□□ -0.63
CSTF3-203ENST00000438862 ZDHHC17Q8IUH5 632 aa11.11□□□□□ -0.63
CSTF3-203ENST00000438862 RHOT1Q8IXI2 618 aa11.11□□□□□ -0.63
CSTF3-203ENST00000438862 GALNT6Q8NCL4 622 aa11.11□□□□□ -0.63
CSTF3-203ENST00000438862 RNF214Q8ND24 703 aa11.11□□□□□ -0.63
CSTF3-203ENST00000438862 C1orf131Q8NDD1 294 aaKnown RBP11.11□□□□□ -0.63
CSTF3-203ENST00000438862 POM121Q96HA1 1249 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms