RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 MYO1AQ9UBC5 1043 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 B4GALT6Q9UBX8 382 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 CNOT8Q9UFF9 292 aaKnown RBP7.77□□□□□ -1.17
VPS50-204ENST00000438395 APPL1Q9UKG1 709 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 DOCK9Q9BZ29 2069 aa7.77□□□□□ -1.17
VPS50-204ENST00000438395 MYLKQ15746 1914 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 TMEM202A6NGA9 273 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 TMEM191CA6NGB0 347 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 LRRC53A6NM62 1247 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 SMTNL1A8MU46 457 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 B8ZZF3 427 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 NVLO15381 856 aaKnown RBP7.76□□□□□ -1.17
VPS50-204ENST00000438395 SLC28A2O43868 658 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 CPNE6O95741 557 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 FTLP02792 175 aaPredicted RBP7.76□□□□□ -1.17
VPS50-204ENST00000438395 HOXC4P09017 264 aaPredicted RBP7.76□□□□□ -1.17
VPS50-204ENST00000438395 PNLIPP16233 465 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 CA4P22748 312 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 ALDH4A1P30038 563 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 SSR1P43307 286 aaKnown RBP7.76□□□□□ -1.17
VPS50-204ENST00000438395 GNPDA1P46926 289 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 HCAR3P49019 387 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 ATP1A2P50993 1020 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 MAPK10P53779 464 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 EPHB1P54762 984 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 TPM4P67936 248 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 RALGDSQ12967 914 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 KRT81Q14533 505 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 CA9Q16790 459 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 AFMIDQ63HM1 303 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 PNCKQ6P2M8 343 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 DOK6Q6PKX4 331 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 SLC30A9Q6PML9 568 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 CLEC17AQ6ZS10 378 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 RBM43Q6ZSC3 357 aaKnown RBP7.76□□□□□ -1.17
VPS50-204ENST00000438395 PIM3Q86V86 326 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 HEATR4Q86WZ0 1026 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 ZSWIM9Q86XI8 627 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 NPWQ8N729 165 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 HSPH1Q92598 858 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 ECHDC3Q96DC8 303 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 SGF29Q96ES7 293 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 TMEM168Q9H0V1 697 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 MRPL40Q9NQ50 206 aaKnown RBP7.76□□□□□ -1.17
VPS50-204ENST00000438395 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.76□□□□□ -1.17
VPS50-204ENST00000438395 TAS2R14Q9NYV8 317 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 TTLL3Q9Y4R7 772 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 RNF215Q9Y6U7 377 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 DOCK4Q8N1I0 1966 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 ATMQ13315 3056 aa7.76□□□□□ -1.17
VPS50-204ENST00000438395 TENM4Q6N022 2769 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 PRAMEF33A0A0G2JMD5 474 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 A0A1W2PQM1 296 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 LRRC10BA6NIK2 292 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 POM121CA8CG34 1229 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 NOBOXO60393 691 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 PRAMEF10O60809 474 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 LRCH4O75427 683 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 HEXIM1O94992 359 aaKnown RBP7.75□□□□□ -1.17
VPS50-204ENST00000438395 SERPINC1P01008 464 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 ITGB2P05107 769 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 SFTPCP11686 197 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 GZMAP12544 262 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 CCNB1P14635 433 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 CD82P27701 267 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 MSX1P28360 303 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 PCK1P35558 622 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 ACTR1BP42025 376 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 MMP13P45452 471 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 CDH6P55285 790 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 MAZP56270 477 aaKnown RBP7.75□□□□□ -1.17
VPS50-204ENST00000438395 ACTR1AP61163 376 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 TYRO3Q06418 890 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 ITKQ08881 620 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 SLC10A7Q0GE19 358 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 NFATC3Q12968 1075 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 DPYSQ14117 519 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 HLTFQ14527 1009 aaKnown RBP eCLIP7.75□□□□□ -1.17
VPS50-204ENST00000438395 CNGA3Q16281 694 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 CLPPQ16740 277 aaPredicted RBP7.75□□□□□ -1.17
VPS50-204ENST00000438395 SMTNL2Q2TAL5 461 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 BOLA3Q53S33 107 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 RALGPS1Q5JS13 557 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 ARMC12Q5T9G4 340 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 MARC1Q5VT66 337 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 PCSK4Q6UW60 755 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 XKR5Q6UX68 686 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 ARHGAP36Q6ZRI8 547 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 IRF2BP2Q7Z5L9 587 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 ARHGAP12Q8IWW6 846 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 ZDHHC1Q8WTX9 485 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 TTC9Q92623 222 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 VOPP1Q96AW1 172 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 DTD2Q96FN9 168 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 AHCYL2Q96HN2 611 aaKnown RBP7.75□□□□□ -1.17
VPS50-204ENST00000438395 NUDCD1Q96RS6 583 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 PEBP4Q96S96 227 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 TRIM7Q9C029 511 aa7.75□□□□□ -1.17
VPS50-204ENST00000438395 STN1Q9H668 368 aaKnown RBP7.75□□□□□ -1.17
VPS50-204ENST00000438395 CLMPQ9H6B4 373 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms