RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ZNF549Q6P9A3 640 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 RNF180Q86T96 592 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 TMEM135Q86UB9 458 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 ERI1Q8IV48 349 aaKnown RBP6.67□□□□□ -1.34
CSDE1-205ENST00000438362 OFCC1Q8IZS5 231 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 OR4K2Q8NGD2 314 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 SPPL2AQ8TCT8 520 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 KIFC1Q9BW19 673 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 CIDEBQ9UHD4 219 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 CNOT6Q9ULM6 557 aaKnown RBP6.67□□□□□ -1.34
CSDE1-205ENST00000438362 KIAA1551Q9HCM1 1747 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 H3BMM5 538 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 IRAK2O43187 625 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 ARHGEF9O43307 516 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 NDST3O95803 873 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 MZF1P28698 734 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-205ENST00000438362 CD52P31358 61 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 ATP6V1E1P36543 226 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 GMPRP36959 345 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 ALDH7A1P49419 539 aaKnown RBP6.67□□□□□ -1.34
CSDE1-205ENST00000438362 PITX1P78337 314 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-205ENST00000438362 CTC1Q2NKJ3 1217 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 RFX4Q33E94 735 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 SPDYE7PQ495Y7 208 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 FBXO48Q5FWF7 155 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 RALGPS2Q86X27 583 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-205ENST00000438362 MARVELD2Q8N4S9 558 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 SELENOMQ8WWX9 145 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 BTN2A3PQ96KV6 586 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 HAPLN3Q96S86 360 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 BBS2Q9BXC9 721 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 ROGDIQ9GZN7 287 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 OSBPL2Q9H1P3 480 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 BPIFA1Q9NP55 256 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 DDX60LQ5H9U9 1706 aaKnown RBP6.67□□□□□ -1.34
CSDE1-205ENST00000438362 ASLP04424 464 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 HSMCR30P0CW71 290 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 EPB42P16452 691 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 SOX6P35712 828 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 YBEYP58557 167 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-205ENST00000438362 MERTKQ12866 999 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 MAP2K5Q13163 448 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 TAZQ16635 292 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 PERM1Q5SV97 790 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 ZNF621Q6ZSS3 439 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 USP50Q70EL3 339 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-205ENST00000438362 THAP5Q7Z6K1 395 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 OSTM1Q86WC4 334 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 STX19Q8N4C7 294 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 PCSK9Q8NBP7 692 aaKnown RBP6.67□□□□□ -1.34
CSDE1-205ENST00000438362 GPR21Q99679 349 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 SLC39A3Q9BRY0 314 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 OXCT2Q9BYC2 517 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-205ENST00000438362 REEP1Q9H902 201 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 TXNRD2Q9NNW7 524 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 SMPD4Q9NXE4 827 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 ARL15Q9NXU5 204 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 SLC2A6Q9UGQ3 507 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 GLI3P10071 1580 aa6.67□□□□□ -1.34
CSDE1-205ENST00000438362 AHDC1Q5TGY3 1603 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-205ENST00000438362 GNG14A0A1W2PPG7 69 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 NPEPPSL1A6NEC2 478 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 G3V2T6 193 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 ALDH1A1P00352 501 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 GOT2P00505 430 aaKnown RBP6.66□□□□□ -1.34
CSDE1-205ENST00000438362 HLA-DQB2P05538 268 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 GSNP06396 782 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 THRBP10828 461 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 POU1F1P28069 291 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 HOXD10P28358 340 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 MC4RP32245 332 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 CAPGP40121 348 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 GSSP48637 474 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 CDH15P55291 814 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 CEACAM7Q14002 265 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 KRT33BQ14525 404 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 TLR1Q15399 786 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 CRY1Q16526 586 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 AP5B1Q2VPB7 878 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 PARP15Q460N3 678 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 OR52E8Q6IFG1 317 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 PACRGLQ8N7B6 248 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 DCBLD1Q8N8Z6 715 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 OR9I1Q8NGQ6 314 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 UTP15Q8TED0 518 aaKnown RBP6.66□□□□□ -1.34
CSDE1-205ENST00000438362 ASB8Q9H765 288 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 PALMDQ9NP74 551 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 CD320Q9NPF0 282 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 CACNA2D2Q9NY47 1150 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 ADGRE2Q9UHX3 823 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 PNMA8BQ9ULN7 279 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-205ENST00000438362 POLR3HQ9Y535 204 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-205ENST00000438362 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-205ENST00000438362 TCRBV5S1A1TA0A578 114 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 EI24O14681 340 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 GABRDO14764 452 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 MED26O95402 600 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 KRT75O95678 551 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 CKMP06732 381 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 ANXA5P08758 320 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms