RNA–Protein interactions for RNA: ENST00000438014.5

R3HDM1-208, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-208ENST00000438014 FYNP06241 537 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 SNRPB2P08579 225 aaKnown RBP8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 TRIM49P0CI25 452 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 TRIM49CP0CI26 452 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 HTR1BP28222 390 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 GFRA1P56159 465 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 MAP4K2Q12851 820 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 TRA2AQ13595 282 aaKnown RBP eCLIP8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 SF1Q15637 639 aaKnown RBP8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 MAP9Q49MG5 647 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 CERCAMQ5T4B2 595 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 SFRP5Q5T4F7 317 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 FBXL22Q6P050 247 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 OGFOD3Q6PK18 319 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 DPY19L3Q6ZPD9 716 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 SPRED1Q7Z699 444 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 TAC4Q86UU9 113 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 FBXL13Q8NEE6 735 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 MEGF10Q96KG7 1140 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 PRMT1Q99873 361 aaKnown RBP8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 HEPHQ9BQS7 1158 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 DDA1Q9BW61 102 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 MIS12Q9H081 205 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 KCTD10Q9H3F6 313 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 CASS4Q9NQ75 786 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 RAB20Q9NX57 234 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 DONSONQ9NYP3 566 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 DKK3Q9UBP4 350 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 PNMA8BQ9ULN7 279 aaPredicted RBP8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 TBC1D30Q9Y2I9 924 aa8.36□□□□□ -1.07
R3HDM1-208ENST00000438014 FBN2P35556 2912 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 K7ERQ8 282 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 NUDT21O43809 227 aaKnown RBP8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 DUX1O43812 170 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 TRUB2O95900 331 aaKnown RBP8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 TNFP01375 233 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 FGF3P11487 239 aaPredicted RBP8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 TCN2P20062 427 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 RRM1P23921 792 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 RPL13P26373 211 aaKnown RBP8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 CSTF2P33240 577 aaKnown RBP eCLIP8.35□□□□□ -1.072e-13■■■■■ 37.5
R3HDM1-208ENST00000438014 PSMC2P35998 433 aaKnown RBP8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 KIR3DL1P43629 444 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 NOP2P46087 812 aaKnown RBP8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 CDH4P55283 916 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 KRT85P78386 507 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 SLC20A2Q08357 652 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 PKP1Q13835 747 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 STILQ15468 1287 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 CNGA2Q16280 664 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 EDRF1Q3B7T1 1238 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 DCAF12Q5T6F0 453 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 C1QL3Q5VWW1 255 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 C22orf39Q6P5X5 142 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 ENPP7Q6UWV6 458 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 RD3Q7Z3Z2 195 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 TMC3Q7Z5M5 1100 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 VPS36Q86VN1 386 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 FAM186BQ8IYM0 893 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 NLGN4XQ8N0W4 816 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 UBR7Q8N806 425 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 AGBL5Q8NDL9 886 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 NLGN4YQ8NFZ3 816 aaPredicted RBP8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 CLEC4CQ8WTT0 213 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 SEMA4DQ92854 862 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 SCARF2Q96GP6 870 aaPredicted RBP8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 ZNF396Q96N95 335 aaPredicted RBP8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 TEFMQ96QE5 360 aaKnown RBP8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 SCAND2PQ9GZW5 306 aaPredicted RBP8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 BLZF1Q9H2G9 400 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 TRIT1Q9H3H1 467 aaKnown RBP8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 TRIM39Q9HCM9 518 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 SLC39A1Q9NY26 324 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 MCM8Q9UJA3 840 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 CFAP45Q9UL16 551 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 GPR55Q9Y2T6 319 aaPredicted RBP8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 B3GALT1Q9Y5Z6 326 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 TRPM6Q9BX84 2022 aa8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 RP1L1Q8IWN7 2480 aaPredicted RBP8.35□□□□□ -1.07
R3HDM1-208ENST00000438014 UNC13CQ8NB66 2214 aa8.34□□□□□ -1.07
R3HDM1-208ENST00000438014 WIPF3A6NGB9 483 aa8.34□□□□□ -1.07
R3HDM1-208ENST00000438014 B4E171 279 aa8.34□□□□□ -1.07
R3HDM1-208ENST00000438014 RNF103O00237 685 aa8.34□□□□□ -1.07
R3HDM1-208ENST00000438014 WIPF1O43516 503 aa8.34□□□□□ -1.07
R3HDM1-208ENST00000438014 SMAD6O43541 496 aaKnown RBP8.34□□□□□ -1.07
R3HDM1-208ENST00000438014 SNAP91O60641 907 aa8.34□□□□□ -1.07
R3HDM1-208ENST00000438014 DNAJC8O75937 253 aaPredicted RBP8.34□□□□□ -1.07
R3HDM1-208ENST00000438014 TM7SF2O76062 418 aa8.34□□□□□ -1.07
R3HDM1-208ENST00000438014 CLDN1O95832 211 aa8.34□□□□□ -1.07
R3HDM1-208ENST00000438014 CBX7O95931 251 aa8.34□□□□□ -1.07
R3HDM1-208ENST00000438014 CPP00450 1065 aa8.34□□□□□ -1.07
R3HDM1-208ENST00000438014 RHOCP08134 193 aa8.34□□□□□ -1.07
R3HDM1-208ENST00000438014 PAEPP09466 180 aa8.34□□□□□ -1.07
R3HDM1-208ENST00000438014 RNF224P0DH78 156 aa8.34□□□□□ -1.07
R3HDM1-208ENST00000438014 ITIH2P19823 946 aa8.34□□□□□ -1.07
R3HDM1-208ENST00000438014 OAS2P29728 719 aaKnown RBP8.34□□□□□ -1.07
R3HDM1-208ENST00000438014 CCR1P32246 355 aa8.34□□□□□ -1.07
R3HDM1-208ENST00000438014 MAN1A1P33908 653 aa8.34□□□□□ -1.07
R3HDM1-208ENST00000438014 IGFALSP35858 605 aa8.34□□□□□ -1.07
R3HDM1-208ENST00000438014 TSPAN7P41732 249 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms