RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 C1QTNF3Q9BXJ4 246 aa4.23□□□□□ -1.73
HMGB3-203ENST00000430118 WDR11Q9BZH6 1224 aa4.23□□□□□ -1.73
HMGB3-203ENST00000430118 TDRD3Q9H7E2 651 aaKnown RBP4.23□□□□□ -1.73
HMGB3-203ENST00000430118 PDE7BQ9NP56 450 aa4.23□□□□□ -1.73
HMGB3-203ENST00000430118 SNTG1Q9NSN8 517 aa4.23□□□□□ -1.73
HMGB3-203ENST00000430118 ARGLU1Q9NWB6 273 aaPredicted RBP4.23□□□□□ -1.73
HMGB3-203ENST00000430118 SYBUQ9NX95 663 aa4.23□□□□□ -1.73
HMGB3-203ENST00000430118 ANKFY1Q9P2R3 1169 aa4.23□□□□□ -1.73
HMGB3-203ENST00000430118 TSC22D4Q9Y3Q8 395 aa4.23□□□□□ -1.73
HMGB3-203ENST00000430118 HEMK1Q9Y5R4 338 aaPredicted RBP4.23□□□□□ -1.73
HMGB3-203ENST00000430118 MAGED1Q9Y5V3 778 aaPredicted RBP4.23□□□□□ -1.73
HMGB3-203ENST00000430118 CAPN7Q9Y6W3 813 aa4.23□□□□□ -1.73
HMGB3-203ENST00000430118 SPEF2Q9C093 1822 aa4.23□□□□□ -1.73
HMGB3-203ENST00000430118 DLG5Q8TDM6 1919 aa4.23□□□□□ -1.73
HMGB3-203ENST00000430118 PFASO15067 1338 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 MGAMO43451 1857 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 LOC100509620A0A075B734 347 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 A0A0G2JLL6 359 aaPredicted RBP4.22□□□□□ -1.73
HMGB3-203ENST00000430118 LINC00473A8K010 186 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 KBTBD13C9JR72 458 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 K7ESM1 405 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 EBAG9O00559 213 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 HCRTR2O43614 444 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 TBCAO75347 108 aaKnown RBP4.22□□□□□ -1.73
HMGB3-203ENST00000430118 ENTPD3O75355 529 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 NDUFS3O75489 264 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 DDAH2O95865 285 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 RB1P06400 928 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 FCGR2AP12318 317 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 GLULP15104 373 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 CALRP27797 417 aaKnown RBP4.22□□□□□ -1.73
HMGB3-203ENST00000430118 CTNNA1P35221 906 aaKnown RBP4.22□□□□□ -1.73
HMGB3-203ENST00000430118 HSD17B4P51659 736 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 MRPL12P52815 198 aaKnown RBP4.22□□□□□ -1.73
HMGB3-203ENST00000430118 HOXA4Q00056 320 aaPredicted RBP4.22□□□□□ -1.73
HMGB3-203ENST00000430118 TFAP4Q01664 338 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 IRF3Q14653 427 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 PLCB4Q15147 1175 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 PFKFB3Q16875 520 aaPredicted RBP4.22□□□□□ -1.73
HMGB3-203ENST00000430118 KRT24Q2M2I5 525 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 PCGF3Q3KNV8 242 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 CCDC184Q52MB2 194 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 SOWAHCQ53LP3 525 aaPredicted RBP4.22□□□□□ -1.73
HMGB3-203ENST00000430118 AKNAD1Q5T1N1 836 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 LAIR1Q6GTX8 287 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 RANBP10Q6VN20 620 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 GLDNQ6ZMI3 551 aaPredicted RBP4.22□□□□□ -1.73
HMGB3-203ENST00000430118 RNF144BQ7Z419 303 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 VSIG1Q86XK7 387 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 TEX11Q8IYF3 940 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 CERS5Q8N5B7 392 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 ANKRD13CQ8N6S4 541 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 POC5Q8NA72 575 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 PSPC1Q8WXF1 523 aaKnown RBP4.22□□□□□ -1.73
HMGB3-203ENST00000430118 KAT2BQ92831 832 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 EXTL1Q92935 676 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 GTF3C6Q969F1 213 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 ZNF653Q96CK0 615 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 PDLIM2Q96JY6 352 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 C1orf74Q96LT6 269 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 ADAD1Q96M93 576 aaKnown RBP4.22□□□□□ -1.73
HMGB3-203ENST00000430118 ZNF347Q96SE7 839 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 SLC32A1Q9H598 525 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 ZWILCHQ9H900 591 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 ARL8BQ9NVJ2 186 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 ST6GALNAC2Q9UJ37 374 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 AGTPBP1Q9UPW5 1226 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 ICKQ9UPZ9 632 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 KIF3AQ9Y496 699 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 PCDHGB5Q9Y5G0 923 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 FAM169AQ9Y6X4 670 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 MYH3P11055 1940 aa4.22□□□□□ -1.73
HMGB3-203ENST00000430118 KIF16BQ96L93 1317 aa4.21□□□□□ -1.73
HMGB3-203ENST00000430118 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.21□□□□□ -1.74
HMGB3-203ENST00000430118 TCRBV5S1A1TA0A578 114 aa4.21□□□□□ -1.74
HMGB3-203ENST00000430118 CBY3A6NI87 242 aa4.21□□□□□ -1.74
HMGB3-203ENST00000430118 POC1B-GALNT4F8VUJ3 575 aa4.21□□□□□ -1.74
HMGB3-203ENST00000430118 DNM1LO00429 736 aa4.21□□□□□ -1.74
HMGB3-203ENST00000430118 ADAM20O43506 726 aa4.21□□□□□ -1.74
HMGB3-203ENST00000430118 LIASO43766 372 aa4.21□□□□□ -1.74
HMGB3-203ENST00000430118 GCATO75600 419 aa4.21□□□□□ -1.74
HMGB3-203ENST00000430118 JTBO76095 146 aa4.21□□□□□ -1.74
HMGB3-203ENST00000430118 CLTBP09497 229 aa4.21□□□□□ -1.74
HMGB3-203ENST00000430118 PCNAP12004 261 aa4.21□□□□□ -1.74
HMGB3-203ENST00000430118 TMEM11P17152 192 aa4.21□□□□□ -1.74
HMGB3-203ENST00000430118 YWHAQP27348 245 aa4.21□□□□□ -1.74
HMGB3-203ENST00000430118 DPP6P42658 865 aa4.21□□□□□ -1.74
HMGB3-203ENST00000430118 SOX2P48431 317 aa4.21□□□□□ -1.74
HMGB3-203ENST00000430118 CENPAP49450 140 aa4.21□□□□□ -1.74
HMGB3-203ENST00000430118 RAD23AP54725 363 aa4.21□□□□□ -1.74
HMGB3-203ENST00000430118 ZBED6P86452 979 aa4.21□□□□□ -1.74
HMGB3-203ENST00000430118 ZBTB16Q05516 673 aa4.21□□□□□ -1.74
HMGB3-203ENST00000430118 TUBA3CQ13748 450 aa4.21□□□□□ -1.74
HMGB3-203ENST00000430118 BAATQ14032 418 aaPredicted RBP4.21□□□□□ -1.74
HMGB3-203ENST00000430118 SCARB2Q14108 478 aa4.21□□□□□ -1.74
HMGB3-203ENST00000430118 ADIPOQQ15848 244 aa4.21□□□□□ -1.74
HMGB3-203ENST00000430118 LRRC26Q2I0M4 334 aa4.21□□□□□ -1.74
HMGB3-203ENST00000430118 FAM153CQ494X1 144 aa4.21□□□□□ -1.74
HMGB3-203ENST00000430118 NCAPH2Q6IBW4 605 aa4.21□□□□□ -1.74
HMGB3-203ENST00000430118 TUBA3EQ6PEY2 450 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms