RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 TRIM54Q9BYV2 358 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 EPS8L2Q9H6S3 715 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 NTN4Q9HB63 628 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 EML4Q9HC35 981 aaKnown RBP16.06■□□□□ 0.16
C9orf3-206ENST00000428313 TRIM39Q9HCM9 518 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 GPATCH2LQ9NWQ4 482 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 PAQR5Q9NXK6 330 aaPredicted RBP16.06■□□□□ 0.16
C9orf3-206ENST00000428313 XPR1Q9UBH6 696 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 OPTCQ9UBM4 332 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 SLC39A10Q9ULF5 831 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 CCDC154A6NI56 674 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 UNCXA6NJT0 531 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 KCNQ2O43526 872 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 CST3P01034 146 aaPredicted RBP16.06■□□□□ 0.16
C9orf3-206ENST00000428313 ASNSP08243 561 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 SFNP31947 248 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 ACTR2P61160 394 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 NCS1P62166 190 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 LSM3P62310 102 aaKnown RBP16.06■□□□□ 0.16
C9orf3-206ENST00000428313 CD47Q08722 323 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 PCSK7Q16549 785 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 TKFCQ3LXA3 575 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 RAB6CQ53S08 254 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 LAIR2Q6ISS4 152 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 SYCE2Q6PIF2 218 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 LYPD8Q6UX82 237 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 PRR23BQ6ZRT6 265 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 ZNF438Q7Z4V0 828 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 GATAD2AQ86YP4 633 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 RIMKLAQ8IXN7 391 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 CLEC4FQ8N1N0 589 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 PJA1Q8NG27 643 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 SLC39A13Q96H72 371 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 ZFYVE19Q96K21 471 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 HAPLN2Q9GZV7 340 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 RAB6CQ9H0N0 254 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 PIH1D1Q9NWS0 290 aaKnown RBP16.06■□□□□ 0.16
C9orf3-206ENST00000428313 FBXL12Q9NXK8 326 aa16.06■□□□□ 0.16
C9orf3-206ENST00000428313 INTS6Q9UL03 887 aaKnown RBP16.06■□□□□ 0.16
C9orf3-206ENST00000428313 OR5K3A6NET4 321 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 METTL15A6NJ78 407 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 hCG_2039718K7EN88 272 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 UPK1AO00322 258 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 TSPAN1O60635 241 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 KATNA1O75449 491 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 BBOX1O75936 387 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 MTHFD1P11586 935 aaKnown RBP16.05■□□□□ 0.16
C9orf3-206ENST00000428313 UGT2B10P36537 528 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 GLRBP48167 497 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 NDST1P52848 882 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 HSPA2P54652 639 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 CCNA1P78396 465 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 GRM1Q13255 1194 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 ACAP2Q15057 778 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 FXNQ16595 210 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 CRY2Q49AN0 593 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 GJC2Q5T442 439 aaPredicted RBP16.05■□□□□ 0.16
C9orf3-206ENST00000428313 BSPRYQ5W0U4 402 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 TRNP1Q6NT89 227 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 SLC51AQ86UW1 340 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 FAM35AQ86V20 835 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 WDR49Q8IV35 697 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 OR5H6Q8NGV6 325 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 KCTD4Q8WVF5 259 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 LGALS12Q96DT0 336 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 MSTO1Q9BUK6 570 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 SNRNP25Q9BV90 132 aaKnown RBP16.05■□□□□ 0.16
C9orf3-206ENST00000428313 DEFB129Q9H1M3 183 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 OSBPL2Q9H1P3 480 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 NSMCE4AQ9NXX6 385 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 NUP50Q9UKX7 468 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 UBIAD1Q9Y5Z9 338 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 ZCWPW2A0A1B0GU75 182 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 ZBBXA8MT70 800 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 DPYSL4O14531 572 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 ANGPT2O15123 496 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 SNX2O60749 519 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 SUPT7LO94864 414 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 SLC35E2BP0CK96 405 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 SLURP2P0DP57 97 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 PRIM2P49643 509 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 GSK3BP49841 420 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 ATN1P54259 1190 aaPredicted RBP16.05■□□□□ 0.16
C9orf3-206ENST00000428313 SOX10P56693 466 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 ZC3HC1Q86WB0 502 aaKnown RBP16.05■□□□□ 0.16
C9orf3-206ENST00000428313 CENPLQ8N0S6 344 aaPredicted RBP16.05■□□□□ 0.16
C9orf3-206ENST00000428313 ACVR1CQ8NER5 493 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 PIK3R3Q92569 461 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 CCDC90BQ9GZT6 254 aa16.05■□□□□ 0.16
C9orf3-206ENST00000428313 KAT8Q9H7Z6 458 aaKnown RBP16.05■□□□□ 0.16
C9orf3-206ENST00000428313 LRRC37AA6NMS7 1700 aa16.04■□□□□ 0.16
C9orf3-206ENST00000428313 A0A0G2JMP0 313 aa16.04■□□□□ 0.16
C9orf3-206ENST00000428313 A0A0J9YYE9 177 aa16.04■□□□□ 0.16
C9orf3-206ENST00000428313 CLDN24A6NM45 220 aa16.04■□□□□ 0.16
C9orf3-206ENST00000428313 CNTN5O94779 1100 aa16.04■□□□□ 0.16
C9orf3-206ENST00000428313 IL32P24001 234 aa16.04■□□□□ 0.16
C9orf3-206ENST00000428313 HTR2BP41595 481 aa16.04■□□□□ 0.16
C9orf3-206ENST00000428313 ST13P50502 369 aaKnown RBP16.04■□□□□ 0.16
C9orf3-206ENST00000428313 GRM3Q14832 879 aa16.04■□□□□ 0.16
C9orf3-206ENST00000428313 CA9Q16790 459 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms