RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 ZNF578Q96N58 590 aaPredicted RBP18.34■□□□□ 0.53
PSPC1-202ENST00000427943 AGAP2Q99490 1192 aa18.34■□□□□ 0.53
PSPC1-202ENST00000427943 MAK16Q9BXY0 300 aaKnown RBP18.34■□□□□ 0.53
PSPC1-202ENST00000427943 GOLPH3Q9H4A6 298 aa18.34■□□□□ 0.53
PSPC1-202ENST00000427943 EPB41L5Q9HCM4 733 aa18.34■□□□□ 0.53
PSPC1-202ENST00000427943 SPATS2LQ9NUQ6 558 aaKnown RBP18.34■□□□□ 0.53
PSPC1-202ENST00000427943 SEPT10Q9P0V9 454 aa18.34■□□□□ 0.53
PSPC1-202ENST00000427943 INTUQ9ULD6 942 aa18.34■□□□□ 0.53
PSPC1-202ENST00000427943 RNF215Q9Y6U7 377 aa18.34■□□□□ 0.53
PSPC1-202ENST00000427943 D6RAR5 112 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 INPP4BO15327 924 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 SPOPO43791 374 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 GLB1P16278 677 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 COMTP21964 271 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 MAZP56270 477 aaKnown RBP18.33■□□□□ 0.52
PSPC1-202ENST00000427943 SKOR1P84550 965 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 ILF3Q12906 894 aaKnown RBP eCLIP18.33■□□□□ 0.521e-6■■■■□ 22.3
PSPC1-202ENST00000427943 HLTFQ14527 1009 aaKnown RBP eCLIP18.33■□□□□ 0.52
PSPC1-202ENST00000427943 CERCAMQ5T4B2 595 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 LRRC38Q5VT99 294 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 SLC30A9Q6PML9 568 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 SARM1Q6SZW1 724 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 MFSD7Q6UXD7 560 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 VSIG1Q86XK7 387 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 CCNJLQ8IV13 435 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 SPACA3Q8IXA5 215 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 TC2NQ8N9U0 490 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 ZNF248Q8NDW4 579 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 OR6C4Q8NGE1 309 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 KIAA1524Q8TCG1 905 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 GPBAR1Q8TDU6 330 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 GRAMD1AQ96CP6 724 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 PRR11Q96HE9 360 aaPredicted RBP18.33■□□□□ 0.52
PSPC1-202ENST00000427943 HIC2Q96JB3 615 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 GSDMCQ9BYG8 508 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 FOXP3Q9BZS1 431 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 LRRN3Q9H3W5 708 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 DDX56Q9NY93 547 aaKnown RBP18.33■□□□□ 0.52
PSPC1-202ENST00000427943 LRIT1Q9P2V4 623 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 DNPEPQ9ULA0 475 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 ATXN7L1Q9ULK2 861 aaPredicted RBP18.33■□□□□ 0.52
PSPC1-202ENST00000427943 TFR2Q9UP52 801 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 SLC17A4Q9Y2C5 497 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 TMEM98Q9Y2Y6 226 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 ST14Q9Y5Y6 855 aa18.33■□□□□ 0.52
PSPC1-202ENST00000427943 BPTFQ12830 3046 aa18.32■□□□□ 0.52
PSPC1-202ENST00000427943 CCDC187A0A096LP49 1063 aa18.32■□□□□ 0.52
PSPC1-202ENST00000427943 C1orf232A0A0U1RR37 186 aa18.32■□□□□ 0.52
PSPC1-202ENST00000427943 PPP1R12AO14974 1030 aaPredicted RBP18.32■□□□□ 0.52
PSPC1-202ENST00000427943 IVLP07476 585 aa18.32■□□□□ 0.52
PSPC1-202ENST00000427943 RBMS1P29558 406 aaKnown RBP18.32■□□□□ 0.52
PSPC1-202ENST00000427943 SLC1A1P43005 524 aa18.32■□□□□ 0.52
PSPC1-202ENST00000427943 NOP2P46087 812 aaKnown RBP18.32■□□□□ 0.52
PSPC1-202ENST00000427943 ERVPABLB-1P60509 514 aa18.32■□□□□ 0.52
PSPC1-202ENST00000427943 GALNT3Q14435 633 aa18.32■□□□□ 0.52
PSPC1-202ENST00000427943 PDK1Q15118 436 aa18.32■□□□□ 0.52
PSPC1-202ENST00000427943 LLGL1Q15334 1064 aa18.32■□□□□ 0.52
PSPC1-202ENST00000427943 QPCTQ16769 361 aa18.32■□□□□ 0.52
PSPC1-202ENST00000427943 ADAMTSL4Q6UY14 1074 aa18.32■□□□□ 0.52
PSPC1-202ENST00000427943 MARK2Q7KZI7 788 aaKnown RBP18.32■□□□□ 0.52
PSPC1-202ENST00000427943 ZNF765Q7L2R6 523 aa18.32■□□□□ 0.52
PSPC1-202ENST00000427943 WDR36Q8NI36 951 aaKnown RBP18.32■□□□□ 0.52
PSPC1-202ENST00000427943 ZDHHC1Q8WTX9 485 aa18.32■□□□□ 0.52
PSPC1-202ENST00000427943 AGAP3Q96P47 875 aa18.32■□□□□ 0.52
PSPC1-202ENST00000427943 OLFM3Q96PB7 478 aa18.32■□□□□ 0.52
PSPC1-202ENST00000427943 ANP32EQ9BTT0 268 aa18.32■□□□□ 0.52
PSPC1-202ENST00000427943 RIOK2Q9BVS4 552 aaKnown RBP18.32■□□□□ 0.52
PSPC1-202ENST00000427943 BRD8Q9H0E9 1235 aa18.32■□□□□ 0.52
PSPC1-202ENST00000427943 THSD1Q9NS62 852 aa18.32■□□□□ 0.52
PSPC1-202ENST00000427943 TRNAU1APQ9NX07 287 aaKnown RBP18.32■□□□□ 0.52
PSPC1-202ENST00000427943 TAAR2Q9P1P5 351 aa18.32■□□□□ 0.52
PSPC1-202ENST00000427943 PLEKHM1Q9Y4G2 1056 aa18.32■□□□□ 0.52
PSPC1-202ENST00000427943 AGRPO00253 132 aa18.31■□□□□ 0.52
PSPC1-202ENST00000427943 ZFXP17010 805 aaPredicted RBP18.31■□□□□ 0.52
PSPC1-202ENST00000427943 ADCY8P40145 1251 aa18.31■□□□□ 0.52
PSPC1-202ENST00000427943 MAGEA1P43355 309 aa18.31■□□□□ 0.52
PSPC1-202ENST00000427943 RPL26P61254 145 aaKnown RBP18.31■□□□□ 0.52
PSPC1-202ENST00000427943 CTBSQ01459 385 aa18.31■□□□□ 0.52
PSPC1-202ENST00000427943 TLE3Q04726 772 aa18.31■□□□□ 0.52
PSPC1-202ENST00000427943 TCEAL1Q15170 157 aa18.31■□□□□ 0.52
PSPC1-202ENST00000427943 IGF2-ASQ6U949 168 aa18.31■□□□□ 0.52
PSPC1-202ENST00000427943 KDELC2Q7Z4H8 507 aa18.31■□□□□ 0.52
PSPC1-202ENST00000427943 SPRED1Q7Z699 444 aa18.31■□□□□ 0.52
PSPC1-202ENST00000427943 PATE1Q8WXA2 126 aa18.31■□□□□ 0.52
PSPC1-202ENST00000427943 LIN37Q96GY3 246 aaPredicted RBP18.31■□□□□ 0.52
PSPC1-202ENST00000427943 SLC46A1Q96NT5 459 aa18.31■□□□□ 0.52
PSPC1-202ENST00000427943 OR2M4Q96R27 311 aa18.31■□□□□ 0.52
PSPC1-202ENST00000427943 LYSMD1Q96S90 227 aa18.31■□□□□ 0.52
PSPC1-202ENST00000427943 CDH19Q9H159 772 aa18.31■□□□□ 0.52
PSPC1-202ENST00000427943 APPL1Q9UKG1 709 aa18.31■□□□□ 0.52
PSPC1-202ENST00000427943 RPL26L1Q9UNX3 145 aaKnown RBP18.31■□□□□ 0.52
PSPC1-202ENST00000427943 PCDHGA8Q9Y5G5 932 aa18.31■□□□□ 0.52
PSPC1-202ENST00000427943 SLC4A1P02730 911 aa18.3■□□□□ 0.52
PSPC1-202ENST00000427943 FGF1P05230 155 aa18.3■□□□□ 0.52
PSPC1-202ENST00000427943 PIRTP0C851 137 aa18.3■□□□□ 0.52
PSPC1-202ENST00000427943 INHBCP55103 352 aa18.3■□□□□ 0.52
PSPC1-202ENST00000427943 PCSK7Q16549 785 aa18.3■□□□□ 0.52
PSPC1-202ENST00000427943 SOWAHCQ53LP3 525 aaPredicted RBP18.3■□□□□ 0.52
PSPC1-202ENST00000427943 KAZNQ674X7 775 aa18.3■□□□□ 0.52
PSPC1-202ENST00000427943 LYSMD3Q7Z3D4 306 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms