RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 B3GNT6Q6ZMB0 384 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 SETD3Q86TU7 594 aaPredicted RBP10.64□□□□□ -0.71
TCOF1-204ENST00000427724 TXLNGYQ9BZA5 131 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 PAIP1Q9H074 479 aaKnown RBP10.64□□□□□ -0.71
TCOF1-204ENST00000427724 ILKAPQ9H0C8 392 aaPredicted RBP10.64□□□□□ -0.71
TCOF1-204ENST00000427724 C8orf33Q9H7E9 229 aaPredicted RBP10.64□□□□□ -0.71
TCOF1-204ENST00000427724 IL1RL2Q9HB29 575 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 SPHK2Q9NRA0 654 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 LYPLA1O75608 230 aaPredicted RBP10.64□□□□□ -0.71
TCOF1-204ENST00000427724 TMEM63AO94886 807 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 DDX5P17844 614 aaKnown RBP10.64□□□□□ -0.71
TCOF1-204ENST00000427724 CXCR2P25025 360 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 TBL3Q12788 808 aaKnown RBP10.64□□□□□ -0.71
TCOF1-204ENST00000427724 CDC16Q13042 620 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 LPCAT2Q7L5N7 544 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 ZBTB46Q86UZ6 589 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 C2orf73Q8N5S3 287 aaPredicted RBP10.64□□□□□ -0.71
TCOF1-204ENST00000427724 ARHGAP9Q9BRR9 750 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 TAS2R13Q9NYV9 303 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 MYH1P12882 1939 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 MYH4Q9Y623 1939 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 A0A1B0GVG6 124 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 CHADO15335 359 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 CCNT2O60583 730 aaKnown RBP10.64□□□□□ -0.71
TCOF1-204ENST00000427724 DLDP09622 509 aaKnown RBP10.64□□□□□ -0.71
TCOF1-204ENST00000427724 MOGSQ13724 837 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 PRAMEF14Q5SWL7 426 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 AGAP9Q5VTM2 703 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 HLA-DQA1Q5Y7H0 255 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 CYP2U1Q7Z449 544 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 AHI1Q8N157 1196 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 OR6Y1Q8NGX8 325 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 HMCESQ96FZ2 354 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 LINC00597Q9H2U6 94 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 CARS2Q9HA77 564 aaKnown RBP10.64□□□□□ -0.71
TCOF1-204ENST00000427724 PCDH18Q9HCL0 1135 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 AURKCQ9UQB9 309 aa10.64□□□□□ -0.71
TCOF1-204ENST00000427724 BRWD3Q6RI45 1802 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 PRR5-ARHGAP8B1AHC4 643 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 HPGDP15428 266 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 SOAT1P35610 550 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 ALDH9A1P49189 494 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 ARHGAP8P85298 464 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 GHRHRQ02643 423 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 OCA2Q04671 838 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 TDGQ13569 410 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 DHCR24Q15392 516 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 GSTA3Q16772 222 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 CNPY1Q3B7I2 92 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 PLEKHG6Q3KR16 790 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 PHF19Q5T6S3 580 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 NEPROQ6NW34 567 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 ADGRD1Q6QNK2 874 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 CAMK1DQ8IU85 385 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 BEND7Q8N7W2 519 aaPredicted RBP10.63□□□□□ -0.71
TCOF1-204ENST00000427724 DDHD1Q8NEL9 900 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 OSCP1Q8WVF1 389 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 SORCS1Q8WY21 1168 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 TCEAL4Q96EI5 215 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 LRCH3Q96II8 777 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 DNAAF2Q9NVR5 837 aaKnown RBP10.63□□□□□ -0.71
TCOF1-204ENST00000427724 ARL15Q9NXU5 204 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 PSMD13Q9UNM6 376 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 GNG14A0A1W2PPG7 69 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 TCRBV7S3A2A0A539 114 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 OR2AG2A6NM03 316 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 HACD1B0YJ81 288 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 B4DGG1 531 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 TPP1O14773 563 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 PMM2O15305 246 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 PEX1O43933 1283 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 SERPINE1P05121 402 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 CDH3P22223 829 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 MAGEA11P43364 429 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 PSMD7P51665 324 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 GBE1Q04446 702 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 SIM2Q14190 667 aaPredicted RBP10.63□□□□□ -0.71
TCOF1-204ENST00000427724 SIX1Q15475 284 aaPredicted RBP10.63□□□□□ -0.71
TCOF1-204ENST00000427724 ACSBG2Q5FVE4 666 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 KIAA2013Q8IYS2 634 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 CCDC185Q8N715 623 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 PIWIL2Q8TC59 973 aaKnown RBP10.63□□□□□ -0.71
TCOF1-204ENST00000427724 RLN3Q8WXF3 142 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 KLHDC7BQ96G42 594 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 CADM1Q9BY67 442 aaKnown RBP10.63□□□□□ -0.71
TCOF1-204ENST00000427724 PALMDQ9NP74 551 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 TMCO1Q9UM00 188 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 PCNTO95613 3336 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 CABIN1Q9Y6J0 2220 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.63□□□□□ -0.71
TCOF1-204ENST00000427724 PAK4O96013 591 aaPredicted RBP10.63□□□□□ -0.71
TCOF1-204ENST00000427724 IFNA16P05015 189 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 GRK2P25098 689 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 SOX9P48436 509 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 CD151P48509 253 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 SKP1P63208 163 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 DSC2Q02487 901 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 PDK3Q15120 406 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 CRY1Q16526 586 aa10.63□□□□□ -0.71
TCOF1-204ENST00000427724 PTPRNQ16849 979 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms