RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 MTAPQ13126 283 aa13.8□□□□□ -0.2
SREBF2-202ENST00000424354 KHDC1Q4VXA5 237 aaKnown RBP13.8□□□□□ -0.2
SREBF2-202ENST00000424354 GLYATQ6IB77 296 aa13.8□□□□□ -0.2
SREBF2-202ENST00000424354 LRRC57Q8N9N7 239 aa13.8□□□□□ -0.2
SREBF2-202ENST00000424354 OR52K2Q8NGK3 314 aa13.8□□□□□ -0.2
SREBF2-202ENST00000424354 DDX4Q9NQI0 724 aaKnown RBP13.8□□□□□ -0.2
SREBF2-202ENST00000424354 CREBZFQ9NS37 354 aa13.8□□□□□ -0.2
SREBF2-202ENST00000424354 RCOR3Q9P2K3 495 aaPredicted RBP13.8□□□□□ -0.2
SREBF2-202ENST00000424354 DNAJB4Q9UDY4 337 aa13.8□□□□□ -0.2
SREBF2-202ENST00000424354 BCORQ6W2J9 1755 aa13.8□□□□□ -0.2
SREBF2-202ENST00000424354 C5orf60A6NFR6 353 aa13.8□□□□□ -0.2
SREBF2-202ENST00000424354 MEIS2O14770 477 aa13.8□□□□□ -0.2
SREBF2-202ENST00000424354 FGF1P05230 155 aa13.8□□□□□ -0.2
SREBF2-202ENST00000424354 CYP4B1P13584 511 aa13.8□□□□□ -0.2
SREBF2-202ENST00000424354 BMP7P18075 431 aa13.8□□□□□ -0.2
SREBF2-202ENST00000424354 SDC2P34741 201 aa13.8□□□□□ -0.2
SREBF2-202ENST00000424354 PCBP1Q15365 356 aaKnown RBP eCLIP13.8□□□□□ -0.26e-7■■■■□ 20.6
SREBF2-202ENST00000424354 HLA-DQA1Q5Y7H0 255 aa13.8□□□□□ -0.2
SREBF2-202ENST00000424354 ELMO1Q92556 727 aa13.8□□□□□ -0.2
SREBF2-202ENST00000424354 CXorf21Q9HAI6 301 aa13.8□□□□□ -0.2
SREBF2-202ENST00000424354 PCDH12Q9NPG4 1184 aa13.8□□□□□ -0.2
SREBF2-202ENST00000424354 UBIAD1Q9Y5Z9 338 aa13.8□□□□□ -0.2
SREBF2-202ENST00000424354 SHANK3Q9BYB0 1731 aa13.8□□□□□ -0.2
SREBF2-202ENST00000424354 SH3BGRLO75368 114 aa13.8□□□□□ -0.2
SREBF2-202ENST00000424354 IGFBP5P24593 272 aa13.8□□□□□ -0.2
SREBF2-202ENST00000424354 TUFMP49411 452 aaKnown RBP13.8□□□□□ -0.2
SREBF2-202ENST00000424354 ELP6Q0PNE2 266 aa13.8□□□□□ -0.2
SREBF2-202ENST00000424354 SETMARQ53H47 684 aaPredicted RBP13.8□□□□□ -0.2
SREBF2-202ENST00000424354 PPP1R15BQ5SWA1 713 aa13.8□□□□□ -0.2
SREBF2-202ENST00000424354 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.8□□□□□ -0.2
SREBF2-202ENST00000424354 POLR3HQ9Y535 204 aaPredicted RBP13.8□□□□□ -0.2
SREBF2-202ENST00000424354 SBF2Q86WG5 1849 aa13.8□□□□□ -0.2
SREBF2-202ENST00000424354 A0A1W2PRG6 482 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 TULP3O75386 442 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 IPO13O94829 963 aaKnown RBP13.79□□□□□ -0.2
SREBF2-202ENST00000424354 NR2F1P10589 423 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 ERCC2P18074 760 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 PAX3P23760 479 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 FAUP35544 74 aaKnown RBP13.79□□□□□ -0.2
SREBF2-202ENST00000424354 BIKQ13323 160 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 LSM12Q3MHD2 195 aaKnown RBP13.79□□□□□ -0.2
SREBF2-202ENST00000424354 SLC39A12Q504Y0 691 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 CCNYL2Q5T2Q4 361 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 ZYG11AQ6WRX3 759 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 PIGZQ86VD9 579 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 RNASE11Q8TAA1 199 aaKnown RBP13.79□□□□□ -0.2
SREBF2-202ENST00000424354 PTCD2Q8WV60 388 aaKnown RBP13.79□□□□□ -0.2
SREBF2-202ENST00000424354 TRAPPC12Q8WVT3 735 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 PCDHB18PQ96TA0 734 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 C2orf49Q9BVC5 232 aaPredicted RBP13.79□□□□□ -0.2
SREBF2-202ENST00000424354 NFKBIZQ9BYH8 718 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 PFDN2Q9UHV9 154 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 QSER1Q2KHR3 1735 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 TFECO14948 347 aaPredicted RBP13.79□□□□□ -0.2
SREBF2-202ENST00000424354 MTA2O94776 668 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 SLC6A2P23975 617 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 MINDY2Q8NBR6 621 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 OR4L1Q8NH43 312 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 P2RY11Q96G91 374 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 ACO2Q99798 780 aaKnown RBP13.79□□□□□ -0.2
SREBF2-202ENST00000424354 WDR18Q9BV38 432 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 NEK6Q9HC98 313 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 SPG21Q9NZD8 308 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 ST3GAL5Q9UNP4 418 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 FAM240BA0A1B0GVZ2 78 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 FAM92AA1XBS5 289 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 CASKO14936 926 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 PCDH8O95206 1070 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 SCIMPQ6UWF3 145 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 ROPN1LQ96C74 230 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 HSD17B14Q9BPX1 270 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 CAB39LQ9H9S4 337 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 GPN1Q9HCN4 374 aaPredicted RBP13.79□□□□□ -0.2
SREBF2-202ENST00000424354 FETUBQ9UGM5 382 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.79□□□□□ -0.25e-6■□□□□ 9.7
SREBF2-202ENST00000424354 PEX16Q9Y5Y5 336 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 ADM5C9JUS6 153 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 SLC22A2O15244 555 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 PEX2P28328 305 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 TLX1P31314 330 aaPredicted RBP13.79□□□□□ -0.2
SREBF2-202ENST00000424354 HSPA14Q0VDF9 509 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 DSG4Q86SJ6 1040 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 CHPFQ8IZ52 775 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 SLC9A7Q96T83 725 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 PAPSS1O43252 624 aaPredicted RBP13.79□□□□□ -0.2
SREBF2-202ENST00000424354 PSEN1P49768 467 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 POLR2JP52435 117 aaKnown RBP13.79□□□□□ -0.2
SREBF2-202ENST00000424354 TUBA4AP68366 448 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 MFSD10Q14728 455 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 P2RY8Q86VZ1 359 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 AHI1Q8N157 1196 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 GRPEL2Q8TAA5 225 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 CPT1BQ92523 772 aa13.79□□□□□ -0.2
SREBF2-202ENST00000424354 C2orf71A6NGG8 1288 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 ARHGEF33A8MVX0 844 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 SPATA31C1P0DKV0 1188 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 ZNF24P17028 368 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 LPOP22079 712 aaPredicted RBP13.78□□□□□ -0.2
SREBF2-202ENST00000424354 MMP8P22894 467 aa13.78□□□□□ -0.2
SREBF2-202ENST00000424354 OMPP47874 163 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms