RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 RNF34Q969K3 372 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 MAGED4Q96JG8 741 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 ACBD6Q9BR61 282 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 BDH2Q9BUT1 245 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 BRINP2Q9C0B6 783 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 POLR3BQ9NW08 1133 aaPredicted RBP15.2■□□□□ 0.02
C9orf3-204ENST00000424143 ITGB1BP2Q9UKP3 347 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 HAS3O00219 553 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 IFRD1O00458 451 aaPredicted RBP15.19■□□□□ 0.02
C9orf3-204ENST00000424143 NR5A2O00482 541 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 TULP3O75386 442 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 PAGE1O75459 146 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 SEC14L2O76054 403 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 ATE1O95260 518 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 CYP11A1P05108 521 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 GNAO1P09471 354 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 HOXB6P17509 224 aaKnown RBP15.19■□□□□ 0.02
C9orf3-204ENST00000424143 OGNP20774 298 aaKnown RBP15.19■□□□□ 0.02
C9orf3-204ENST00000424143 VARSP26640 1264 aaKnown RBP15.19■□□□□ 0.02
C9orf3-204ENST00000424143 GSK3BP49841 420 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 PRAMEP78395 509 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 PMS2P3Q13401 168 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 SEPT6Q14141 434 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 SLC44A4Q53GD3 710 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 ZNF789Q5FWF6 425 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 RBM48Q5RL73 367 aaKnown RBP15.19■□□□□ 0.02
C9orf3-204ENST00000424143 TMEM207Q6UWW9 146 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 SULF1Q8IWU6 871 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 DDIASQ8IXT1 998 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 SFRP1Q8N474 314 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 AADATQ8N5Z0 425 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 DPP10Q8N608 796 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 DDHD1Q8NEL9 900 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 BPIFB1Q8TDL5 484 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 GIPC3Q8TF64 312 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 POP5Q969H6 163 aaKnown RBP15.19■□□□□ 0.02
C9orf3-204ENST00000424143 DCPSQ96C86 337 aaKnown RBP15.19■□□□□ 0.02
C9orf3-204ENST00000424143 PHF21BQ96EK2 531 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 C1orf50Q9BV19 199 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 ALG9Q9H6U8 611 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 TMEM30AQ9NV96 361 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 GIN1Q9NXP7 522 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 ZIM2Q9NZV7 527 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 OAZ3Q9UMX2 235 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 AURKCQ9UQB9 309 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 FIS1Q9Y3D6 152 aa15.19■□□□□ 0.02
C9orf3-204ENST00000424143 OAS3Q9Y6K5 1087 aaKnown RBP15.19■□□□□ 0.02
C9orf3-204ENST00000424143 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.18■□□□□ 0.02
C9orf3-204ENST00000424143 LOC285095A0A1B0GVY8 99 aa15.18■□□□□ 0.02
C9orf3-204ENST00000424143 NOL3O60936 208 aaKnown RBP15.18■□□□□ 0.02
C9orf3-204ENST00000424143 EPOP01588 193 aa15.18■□□□□ 0.02
C9orf3-204ENST00000424143 MBL2P11226 248 aaPredicted RBP15.18■□□□□ 0.02
C9orf3-204ENST00000424143 KCNC1P48547 511 aa15.18■□□□□ 0.02
C9orf3-204ENST00000424143 CDKN2DP55273 166 aa15.18■□□□□ 0.02
C9orf3-204ENST00000424143 C21orf59P57076 290 aa15.18■□□□□ 0.02
C9orf3-204ENST00000424143 LCP2Q13094 533 aa15.18■□□□□ 0.02
C9orf3-204ENST00000424143 CLEC6AQ6EIG7 209 aa15.18■□□□□ 0.02
C9orf3-204ENST00000424143 ZNF280DQ6N043 979 aa15.18■□□□□ 0.02
C9orf3-204ENST00000424143 GALNT13Q8IUC8 556 aa15.18■□□□□ 0.02
C9orf3-204ENST00000424143 EDEM1Q92611 657 aa15.18■□□□□ 0.02
C9orf3-204ENST00000424143 NRBF2Q96F24 287 aa15.18■□□□□ 0.02
C9orf3-204ENST00000424143 PLEKHA8Q96JA3 519 aa15.18■□□□□ 0.02
C9orf3-204ENST00000424143 ATOH8Q96SQ7 321 aa15.18■□□□□ 0.02
C9orf3-204ENST00000424143 BCL7BQ9BQE9 202 aa15.18■□□□□ 0.02
C9orf3-204ENST00000424143 POLR1BQ9H9Y6 1135 aa15.18■□□□□ 0.02
C9orf3-204ENST00000424143 FBRSL1Q9HCM7 1045 aaKnown RBP15.18■□□□□ 0.02
C9orf3-204ENST00000424143 ADARB2Q9NS39 739 aaKnown RBP15.18■□□□□ 0.02
C9orf3-204ENST00000424143 AIG1Q9NVV5 245 aa15.18■□□□□ 0.02
C9orf3-204ENST00000424143 LEF1Q9UJU2 399 aaPredicted RBP15.18■□□□□ 0.02
C9orf3-204ENST00000424143 CDC14AQ9UNH5 594 aa15.18■□□□□ 0.02
C9orf3-204ENST00000424143 MIA3Q5JRA6 1907 aa15.18■□□□□ 0.02
C9orf3-204ENST00000424143 NYNRINQ9P2P1 1898 aaKnown RBP15.18■□□□□ 0.02
C9orf3-204ENST00000424143 CROCCQ5TZA2 2017 aa15.18■□□□□ 0.02
C9orf3-204ENST00000424143 hCG_2014768A0A024R1R8 64 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 TMEM221A6NGB7 291 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 MOXD2PA6NHM9 499 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 STX16O14662 325 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 PIP5K1BO14986 540 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 KLK8O60259 260 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 COQ9O75208 318 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 ENO2P09104 434 aaPredicted RBP15.17■□□□□ 0.02
C9orf3-204ENST00000424143 MTHFD2P13995 350 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 NELFEP18615 380 aaKnown RBP15.17■□□□□ 0.02
C9orf3-204ENST00000424143 CD9P21926 228 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 PSMA3P25788 255 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 CHRNA4P43681 627 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 MLLT6P55198 1093 aaPredicted RBP15.17■□□□□ 0.02
C9orf3-204ENST00000424143 EMX2Q04743 252 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 TMEM62Q0P6H9 643 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 EPS8Q12929 822 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 RPS6KA2Q15349 733 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 MAPRE1Q15691 268 aaKnown RBP15.17■□□□□ 0.02
C9orf3-204ENST00000424143 VPS26BQ4G0F5 336 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 GPR158Q5T848 1215 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 ANKRD26P1Q6NSI1 321 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 KCTD8Q6ZWB6 473 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 RNF135Q8IUD6 432 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 RIMKLAQ8IXN7 391 aa15.17■□□□□ 0.02
C9orf3-204ENST00000424143 RNF168Q8IYW5 571 aaPredicted RBP15.17■□□□□ 0.02
C9orf3-204ENST00000424143 PTGR2Q8N8N7 351 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms