RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 PYCR3Q53H96 274 aa16.66■□□□□ 0.26
CHCHD3-202ENST00000423635 SNAP47Q5SQN1 464 aa16.66■□□□□ 0.26
CHCHD3-202ENST00000423635 TRIM72Q6ZMU5 477 aa16.66■□□□□ 0.26
CHCHD3-202ENST00000423635 ASB18Q6ZVZ8 466 aa16.66■□□□□ 0.26
CHCHD3-202ENST00000423635 HSD11B1LQ7Z5J1 315 aa16.66■□□□□ 0.26
CHCHD3-202ENST00000423635 ZNF761Q86XN6 746 aaPredicted RBP16.66■□□□□ 0.26
CHCHD3-202ENST00000423635 FAM114A1Q8IWE2 563 aa16.66■□□□□ 0.26
CHCHD3-202ENST00000423635 PAF1Q8N7H5 531 aa16.66■□□□□ 0.26
CHCHD3-202ENST00000423635 C3orf20Q8ND61 904 aa16.66■□□□□ 0.26
CHCHD3-202ENST00000423635 SLC37A2Q8TED4 501 aa16.66■□□□□ 0.26
CHCHD3-202ENST00000423635 PSKH2Q96QS6 385 aa16.66■□□□□ 0.26
CHCHD3-202ENST00000423635 OR2M4Q96R27 311 aa16.66■□□□□ 0.26
CHCHD3-202ENST00000423635 ADAM22Q9P0K1 906 aa16.66■□□□□ 0.26
CHCHD3-202ENST00000423635 MRPS18BQ9Y676 258 aaKnown RBP16.66■□□□□ 0.26
CHCHD3-202ENST00000423635 RPS6KL1Q9Y6S9 549 aa16.66■□□□□ 0.26
CHCHD3-202ENST00000423635 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.65■□□□□ 0.26
CHCHD3-202ENST00000423635 POLR1CO15160 346 aaPredicted RBP16.65■□□□□ 0.26
CHCHD3-202ENST00000423635 RECKO95980 971 aa16.65■□□□□ 0.26
CHCHD3-202ENST00000423635 GNLYP22749 145 aa16.65■□□□□ 0.26
CHCHD3-202ENST00000423635 RENBPP51606 427 aa16.65■□□□□ 0.26
CHCHD3-202ENST00000423635 TPI1P60174 286 aa16.65■□□□□ 0.26
CHCHD3-202ENST00000423635 IL10RBQ08334 325 aa16.65■□□□□ 0.26
CHCHD3-202ENST00000423635 RAET1GQ6H3X3 334 aa16.65■□□□□ 0.26
CHCHD3-202ENST00000423635 SSC4DQ8WTU2 575 aa16.65■□□□□ 0.26
CHCHD3-202ENST00000423635 CUEDC1Q9NWM3 386 aaPredicted RBP16.65■□□□□ 0.26
CHCHD3-202ENST00000423635 CACNA1DQ01668 2161 aa16.64■□□□□ 0.25
CHCHD3-202ENST00000423635 TRBV23OR9-2A0A075B6M9 112 aa16.64■□□□□ 0.25
CHCHD3-202ENST00000423635 TCRBV5S1A1TA0A578 114 aa16.64■□□□□ 0.25
CHCHD3-202ENST00000423635 SOCS5O75159 536 aa16.64■□□□□ 0.25
CHCHD3-202ENST00000423635 GFPT2O94808 682 aa16.64■□□□□ 0.25
CHCHD3-202ENST00000423635 LHCGRP22888 699 aa16.64■□□□□ 0.25
CHCHD3-202ENST00000423635 LRP8Q14114 963 aa16.64■□□□□ 0.25
CHCHD3-202ENST00000423635 TPD52L1Q16890 204 aaPredicted RBP16.64■□□□□ 0.25
CHCHD3-202ENST00000423635 Q6ZVL8 140 aa16.64■□□□□ 0.25
CHCHD3-202ENST00000423635 TECPR1Q7Z6L1 1165 aa16.64■□□□□ 0.25
CHCHD3-202ENST00000423635 NLRP8Q86W28 1048 aa16.64■□□□□ 0.25
CHCHD3-202ENST00000423635 PHF13Q86YI8 300 aaPredicted RBP16.64■□□□□ 0.25
CHCHD3-202ENST00000423635 ARHGAP12Q8IWW6 846 aa16.64■□□□□ 0.25
CHCHD3-202ENST00000423635 LZTR1Q8N653 840 aa16.64■□□□□ 0.25
CHCHD3-202ENST00000423635 MLKLQ8NB16 471 aa16.64■□□□□ 0.25
CHCHD3-202ENST00000423635 NCSTNQ92542 709 aa16.64■□□□□ 0.25
CHCHD3-202ENST00000423635 PCDHB18PQ96TA0 734 aa16.64■□□□□ 0.25
CHCHD3-202ENST00000423635 ZMYND15Q9H091 742 aa16.64■□□□□ 0.25
CHCHD3-202ENST00000423635 SARS2Q9NP81 518 aaKnown RBP16.64■□□□□ 0.25
CHCHD3-202ENST00000423635 TLK1Q9UKI8 766 aa16.64■□□□□ 0.25
CHCHD3-202ENST00000423635 PHTF1Q9UMS5 762 aa16.64■□□□□ 0.25
CHCHD3-202ENST00000423635 POLHQ9Y253 713 aa16.64■□□□□ 0.25
CHCHD3-202ENST00000423635 PCDHGC4Q9Y5F7 938 aa16.64■□□□□ 0.25
CHCHD3-202ENST00000423635 RP1L1Q8IWN7 2480 aaPredicted RBP16.64■□□□□ 0.25
CHCHD3-202ENST00000423635 EML2O95834 649 aa16.63■□□□□ 0.25
CHCHD3-202ENST00000423635 SOD1P00441 154 aa16.63■□□□□ 0.25
CHCHD3-202ENST00000423635 CALB1P05937 261 aa16.63■□□□□ 0.25
CHCHD3-202ENST00000423635 FURINP09958 794 aa16.63■□□□□ 0.25
CHCHD3-202ENST00000423635 CYP2A6P11509 494 aaPredicted RBP16.63■□□□□ 0.25
CHCHD3-202ENST00000423635 NFKBIAP25963 317 aa16.63■□□□□ 0.25
CHCHD3-202ENST00000423635 DLSTP36957 453 aa16.63■□□□□ 0.25
CHCHD3-202ENST00000423635 NOP2P46087 812 aaKnown RBP16.63■□□□□ 0.25
CHCHD3-202ENST00000423635 NSFP46459 744 aaKnown RBP16.63■□□□□ 0.25
CHCHD3-202ENST00000423635 EPHA4P54764 986 aa16.63■□□□□ 0.25
CHCHD3-202ENST00000423635 HHEXQ03014 270 aa16.63■□□□□ 0.25
CHCHD3-202ENST00000423635 ERV3-1Q14264 604 aa16.63■□□□□ 0.25
CHCHD3-202ENST00000423635 DENND2CQ68D51 928 aa16.63■□□□□ 0.25
CHCHD3-202ENST00000423635 ADAMTSL4Q6UY14 1074 aa16.63■□□□□ 0.25
CHCHD3-202ENST00000423635 ARHGAP36Q6ZRI8 547 aa16.63■□□□□ 0.25
CHCHD3-202ENST00000423635 SH3KBP1Q96B97 665 aa16.63■□□□□ 0.25
CHCHD3-202ENST00000423635 SCRN2Q96FV2 425 aa16.63■□□□□ 0.25
CHCHD3-202ENST00000423635 CNPY3Q9BT09 278 aa16.63■□□□□ 0.25
CHCHD3-202ENST00000423635 SP110Q9HB58 689 aa16.63■□□□□ 0.25
CHCHD3-202ENST00000423635 SIDT1Q9NXL6 827 aaKnown RBP16.63■□□□□ 0.25
CHCHD3-202ENST00000423635 DACH1Q9UI36 760 aa16.63■□□□□ 0.25
CHCHD3-202ENST00000423635 TMEM98Q9Y2Y6 226 aa16.63■□□□□ 0.25
CHCHD3-202ENST00000423635 PPIL1Q9Y3C6 166 aa16.63■□□□□ 0.25
CHCHD3-202ENST00000423635 TTLL8A6PVC2 850 aa16.62■□□□□ 0.25
CHCHD3-202ENST00000423635 EIF3CLB5ME19 914 aaKnown RBP16.62■□□□□ 0.25
CHCHD3-202ENST00000423635 RFPL1O75677 317 aa16.62■□□□□ 0.25
CHCHD3-202ENST00000423635 MAP3K6O95382 1288 aa16.62■□□□□ 0.25
CHCHD3-202ENST00000423635 ANKRD34CP0C6C1 535 aa16.62■□□□□ 0.25
CHCHD3-202ENST00000423635 GPR1P46091 355 aa16.62■□□□□ 0.25
CHCHD3-202ENST00000423635 PMS2P54278 862 aa16.62■□□□□ 0.25
CHCHD3-202ENST00000423635 RPL7AP62424 266 aaKnown RBP16.62■□□□□ 0.25
CHCHD3-202ENST00000423635 LBRQ14739 615 aaKnown RBP16.62■□□□□ 0.25
CHCHD3-202ENST00000423635 IYDQ6PHW0 289 aa16.62■□□□□ 0.25
CHCHD3-202ENST00000423635 DOK6Q6PKX4 331 aa16.62■□□□□ 0.25
CHCHD3-202ENST00000423635 C6orf15Q6UXA7 325 aaPredicted RBP16.62■□□□□ 0.25
CHCHD3-202ENST00000423635 APLFQ8IW19 511 aaPredicted RBP16.62■□□□□ 0.25
CHCHD3-202ENST00000423635 EFCAB3Q8N7B9 438 aa16.62■□□□□ 0.25
CHCHD3-202ENST00000423635 CPT1CQ8TCG5 803 aa16.62■□□□□ 0.25
CHCHD3-202ENST00000423635 MCCC1Q96RQ3 725 aaPredicted RBP16.62■□□□□ 0.25
CHCHD3-202ENST00000423635 EIF3CQ99613 913 aaKnown RBP16.62■□□□□ 0.25
CHCHD3-202ENST00000423635 GANQ9H2C0 597 aa16.62■□□□□ 0.25
CHCHD3-202ENST00000423635 EPB41L1Q9H4G0 881 aa16.62■□□□□ 0.25
CHCHD3-202ENST00000423635 IGSF5Q9NSI5 407 aa16.62■□□□□ 0.25
CHCHD3-202ENST00000423635 TTC24A2A3L6 582 aaPredicted RBP16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 GOLGA6CA6NDK9 693 aa16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 GOLGA6BA6NDN3 693 aa16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 NPIPB15A6NHN6 443 aaPredicted RBP16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 EEF2KO00418 725 aaKnown RBP16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 GADD45BO75293 160 aaPredicted RBP16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 SEMA7AO75326 666 aa16.61■□□□□ 0.25
CHCHD3-202ENST00000423635 CPP00450 1065 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms