RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 F5H423 210 aaPredicted RBP26.32■■□□□ 1.8
CDK9-202ENST00000421939 SOD1P00441 154 aa26.32■■□□□ 1.8
CDK9-202ENST00000421939 WNT3AP56704 352 aa26.32■■□□□ 1.8
CDK9-202ENST00000421939 TCEA2Q15560 299 aa26.32■■□□□ 1.8
CDK9-202ENST00000421939 SMAD1Q15797 465 aaKnown RBP26.32■■□□□ 1.8
CDK9-202ENST00000421939 CCDC70Q6NSX1 233 aa26.32■■□□□ 1.8
CDK9-202ENST00000421939 KDELC1Q6UW63 502 aa26.32■■□□□ 1.8
CDK9-202ENST00000421939 ADAMTSL4Q6UY14 1074 aa26.32■■□□□ 1.8
CDK9-202ENST00000421939 LYSMD3Q7Z3D4 306 aa26.32■■□□□ 1.8
CDK9-202ENST00000421939 NLRP8Q86W28 1048 aa26.32■■□□□ 1.8
CDK9-202ENST00000421939 GALNT15Q8N3T1 639 aa26.32■■□□□ 1.8
CDK9-202ENST00000421939 OXNAD1Q96HP4 312 aaPredicted RBP26.32■■□□□ 1.8
CDK9-202ENST00000421939 GBA3Q9H227 469 aa26.32■■□□□ 1.8
CDK9-202ENST00000421939 PKD2L2Q9NZM6 624 aa26.32■■□□□ 1.8
CDK9-202ENST00000421939 NCKIPSDQ9NZQ3 722 aa26.32■■□□□ 1.8
CDK9-202ENST00000421939 U3KQA8 63 aa26.32■■□□□ 1.8
CDK9-202ENST00000421939 PYGLP06737 847 aa26.31■■□□□ 1.8
CDK9-202ENST00000421939 PIRTP0C851 137 aa26.31■■□□□ 1.8
CDK9-202ENST00000421939 MYF5P13349 255 aa26.31■■□□□ 1.8
CDK9-202ENST00000421939 SPINT3P49223 89 aa26.31■■□□□ 1.8
CDK9-202ENST00000421939 DUSP3P51452 185 aaPredicted RBP26.31■■□□□ 1.8
CDK9-202ENST00000421939 C6orf132Q5T0Z8 1188 aa26.31■■□□□ 1.8
CDK9-202ENST00000421939 DARS2Q6PI48 645 aaKnown RBP26.31■■□□□ 1.8
CDK9-202ENST00000421939 ZNF662Q6ZS27 426 aa26.31■■□□□ 1.8
CDK9-202ENST00000421939 RIOK2Q9BVS4 552 aaKnown RBP26.31■■□□□ 1.8
CDK9-202ENST00000421939 FRMD8Q9BZ67 464 aaPredicted RBP26.31■■□□□ 1.8
CDK9-202ENST00000421939 MAGEE1Q9HCI5 957 aa26.31■■□□□ 1.8
CDK9-202ENST00000421939 CYP4F12Q9HCS2 524 aa26.31■■□□□ 1.8
CDK9-202ENST00000421939 DOLKQ9UPQ8 538 aa26.31■■□□□ 1.8
CDK9-202ENST00000421939 ZNF711Q9Y462 761 aa26.31■■□□□ 1.8
CDK9-202ENST00000421939 PRSS38A1L453 326 aa26.3■■□□□ 1.8
CDK9-202ENST00000421939 RGSL1A5PLK6 1076 aa26.3■■□□□ 1.8
CDK9-202ENST00000421939 GOLGA6L3A6NEY3 463 aa26.3■■□□□ 1.8
CDK9-202ENST00000421939 YY2O15391 372 aa26.3■■□□□ 1.8
CDK9-202ENST00000421939 STK10O94804 968 aaKnown RBP26.3■■□□□ 1.8
CDK9-202ENST00000421939 TNNT3P45378 269 aaPredicted RBP26.3■■□□□ 1.8
CDK9-202ENST00000421939 KLF1Q13351 362 aaPredicted RBP26.3■■□□□ 1.8
CDK9-202ENST00000421939 ITPRIPL1Q6GPH6 555 aa26.3■■□□□ 1.8
CDK9-202ENST00000421939 UNQ6494/PRO21346Q6UXR6 183 aa26.3■■□□□ 1.8
CDK9-202ENST00000421939 SDR16C5Q8N3Y7 309 aa26.3■■□□□ 1.8
CDK9-202ENST00000421939 TTC13Q8NBP0 860 aa26.3■■□□□ 1.8
CDK9-202ENST00000421939 UBE2Q2Q8WVN8 375 aa26.3■■□□□ 1.8
CDK9-202ENST00000421939 GATA6Q92908 595 aa26.3■■□□□ 1.8
CDK9-202ENST00000421939 BOCQ9BWV1 1114 aa26.3■■□□□ 1.8
CDK9-202ENST00000421939 TMEM121BQ9BXQ6 578 aaPredicted RBP26.3■■□□□ 1.8
CDK9-202ENST00000421939 ZFYVE1Q9HBF4 777 aa26.3■■□□□ 1.8
CDK9-202ENST00000421939 LZTFL1Q9NQ48 299 aa26.3■■□□□ 1.8
CDK9-202ENST00000421939 MOSPD1Q9UJG1 213 aa26.3■■□□□ 1.8
CDK9-202ENST00000421939 SHOC2Q9UQ13 582 aa26.3■■□□□ 1.8
CDK9-202ENST00000421939 MAP1BP46821 2468 aaKnown RBP26.29■■□□□ 1.8
CDK9-202ENST00000421939 ASPMQ8IZT6 3477 aa26.29■■□□□ 1.8
CDK9-202ENST00000421939 KCNN4O15554 427 aa26.29■■□□□ 1.8
CDK9-202ENST00000421939 ZNF189O75820 626 aaPredicted RBP26.29■■□□□ 1.8
CDK9-202ENST00000421939 SLC4A1P02730 911 aa26.29■■□□□ 1.8
CDK9-202ENST00000421939 MPP3Q13368 585 aa26.29■■□□□ 1.8
CDK9-202ENST00000421939 LVRNQ6Q4G3 990 aa26.29■■□□□ 1.8
CDK9-202ENST00000421939 CCNI2Q6ZMN8 369 aaPredicted RBP26.29■■□□□ 1.8
CDK9-202ENST00000421939 GKN2Q86XP6 184 aa26.29■■□□□ 1.8
CDK9-202ENST00000421939 SCG3Q8WXD2 468 aaKnown RBP26.29■■□□□ 1.8
CDK9-202ENST00000421939 ALS2CR12Q96Q35 445 aa26.29■■□□□ 1.8
CDK9-202ENST00000421939 SRPK1Q96SB4 655 aaKnown RBP26.29■■□□□ 1.8
CDK9-202ENST00000421939 AGAP2Q99490 1192 aa26.29■■□□□ 1.8
CDK9-202ENST00000421939 IGF2RP11717 2491 aa26.29■■□□□ 1.8
CDK9-202ENST00000421939 LOC285095A0A1B0GVY8 99 aa26.28■■□□□ 1.8
CDK9-202ENST00000421939 EPOP01588 193 aa26.28■■□□□ 1.8
CDK9-202ENST00000421939 CEACAM5P06731 702 aa26.28■■□□□ 1.8
CDK9-202ENST00000421939 NR0B2Q15466 257 aa26.28■■□□□ 1.8
CDK9-202ENST00000421939 HENMT1Q5T8I9 393 aaKnown RBP26.28■■□□□ 1.8
CDK9-202ENST00000421939 TMPRSS12Q86WS5 348 aa26.28■■□□□ 1.8
CDK9-202ENST00000421939 SLC35F3Q8IY50 421 aa26.28■■□□□ 1.8
CDK9-202ENST00000421939 IPMKQ8NFU5 416 aa26.28■■□□□ 1.8
CDK9-202ENST00000421939 GLMNQ92990 594 aa26.28■■□□□ 1.8
CDK9-202ENST00000421939 EID2BQ96D98 161 aa26.28■■□□□ 1.8
CDK9-202ENST00000421939 MRGPRX2Q96LB1 330 aa26.28■■□□□ 1.8
CDK9-202ENST00000421939 WDR24Q96S15 920 aa26.28■■□□□ 1.8
CDK9-202ENST00000421939 GPR63Q9BZJ6 419 aa26.28■■□□□ 1.8
CDK9-202ENST00000421939 FAM83DQ9H4H8 585 aa26.28■■□□□ 1.8
CDK9-202ENST00000421939 CARS2Q9HA77 564 aaKnown RBP26.28■■□□□ 1.8
CDK9-202ENST00000421939 EPG5Q9HCE0 2579 aa26.28■■□□□ 1.8
CDK9-202ENST00000421939 C1QTNF9BB2RNN3 333 aa26.27■■□□□ 1.8
CDK9-202ENST00000421939 GP1BAP07359 652 aa26.27■■□□□ 1.8
CDK9-202ENST00000421939 C1QTNF9P0C862 333 aa26.27■■□□□ 1.8
CDK9-202ENST00000421939 RPIAP49247 311 aa26.27■■□□□ 1.8
CDK9-202ENST00000421939 ANKRD20A2Q5SQ80 823 aa26.27■■□□□ 1.8
CDK9-202ENST00000421939 SEL1L2Q5TEA6 688 aa26.27■■□□□ 1.8
CDK9-202ENST00000421939 HES3Q5TGS1 186 aa26.27■■□□□ 1.8
CDK9-202ENST00000421939 ANKRD20A1Q5TYW2 823 aa26.27■■□□□ 1.8
CDK9-202ENST00000421939 ANKRD20A3Q5VUR7 823 aa26.27■■□□□ 1.8
CDK9-202ENST00000421939 DOK6Q6PKX4 331 aa26.27■■□□□ 1.8
CDK9-202ENST00000421939 TRIM74Q86UV6 250 aa26.27■■□□□ 1.8
CDK9-202ENST00000421939 HIC2Q96JB3 615 aa26.27■■□□□ 1.8
CDK9-202ENST00000421939 SPATA13Q96N96 652 aa26.27■■□□□ 1.8
CDK9-202ENST00000421939 FSD1LQ9BXM9 530 aa26.27■■□□□ 1.8
CDK9-202ENST00000421939 TMEM168Q9H0V1 697 aa26.27■■□□□ 1.8
CDK9-202ENST00000421939 SUDS3Q9H7L9 328 aaPredicted RBP26.27■■□□□ 1.8
CDK9-202ENST00000421939 SLC17A4Q9Y2C5 497 aa26.27■■□□□ 1.8
CDK9-202ENST00000421939 SPO11Q9Y5K1 396 aa26.27■■□□□ 1.8
CDK9-202ENST00000421939 FAM149AA5PLN7 773 aa26.26■■□□□ 1.79
CDK9-202ENST00000421939 ANXA9O76027 345 aa26.26■■□□□ 1.79
CDK9-202ENST00000421939 IVLP07476 585 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms