RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 OR2AG2A6NM03 316 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 GTPBP1O00178 669 aaKnown RBP10.72□□□□□ -0.69
PTCH1-206ENST00000421141 KRT33AO76009 404 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 ALDH4A1P30038 563 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 FAAP100Q0VG06 881 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 LAPTM5Q13571 262 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 NOMO1Q15155 1222 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 ATXN7L2Q5T6C5 722 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-206ENST00000421141 CREG2Q8IUH2 290 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 ZNF516Q92618 1163 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 LMLNQ96KR4 655 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 FLRT1Q9NZU1 646 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 COPS7AQ9UBW8 275 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 PCDHGC4Q9Y5F7 938 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 HNF4AP41235 474 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 CDKN2BP42772 138 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 AVPR1BP47901 424 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 NUP107P57740 925 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 RPS7P62081 194 aaKnown RBP10.72□□□□□ -0.69
PTCH1-206ENST00000421141 LSM12Q3MHD2 195 aaKnown RBP10.72□□□□□ -0.69
PTCH1-206ENST00000421141 RALGPS1Q5JS13 557 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 PHF19Q5T6S3 580 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 CYP4Z2PQ8N1L4 340 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 SMG9Q9H0W8 520 aaKnown RBP10.72□□□□□ -0.69
PTCH1-206ENST00000421141 OSBPL2Q9H1P3 480 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 CAAP1Q9H8G2 361 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 ADAMTS5Q9UNA0 930 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 GNEQ9Y223 722 aaKnown RBP10.72□□□□□ -0.69
PTCH1-206ENST00000421141 COL9A3Q14050 684 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-206ENST00000421141 RASA2Q15283 850 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 NPY5RQ15761 445 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 AMZ1Q400G9 498 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 SRFBP1Q8NEF9 429 aaKnown RBP10.72□□□□□ -0.69
PTCH1-206ENST00000421141 OR52K2Q8NGK3 314 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 GDPD5Q8WTR4 605 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 NTAN1Q96AB6 310 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 VPS33AQ96AX1 596 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 PPP3R2Q96LZ3 170 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 PTPN18Q99952 460 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 GSDMCQ9BYG8 508 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 ATP6V1HQ9UI12 483 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 COQ4Q9Y3A0 265 aa10.72□□□□□ -0.69
PTCH1-206ENST00000421141 MIA3Q5JRA6 1907 aa10.71□□□□□ -0.69
PTCH1-206ENST00000421141 CCNFP41002 786 aa10.71□□□□□ -0.69
PTCH1-206ENST00000421141 CCT8P50990 548 aa10.71□□□□□ -0.69
PTCH1-206ENST00000421141 RPL6Q02878 288 aaKnown RBP10.71□□□□□ -0.69
PTCH1-206ENST00000421141 RDH11Q8TC12 318 aa10.71□□□□□ -0.69
PTCH1-206ENST00000421141 RAB11FIP5Q9BXF6 653 aa10.71□□□□□ -0.69
PTCH1-206ENST00000421141 FBXO5Q9UKT4 447 aa10.71□□□□□ -0.69
PTCH1-206ENST00000421141 VWA7Q9Y334 891 aa10.71□□□□□ -0.69
PTCH1-206ENST00000421141 ATP5F1P24539 256 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-206ENST00000421141 CST5P28325 142 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-206ENST00000421141 GRIA4P48058 902 aa10.71□□□□□ -0.69
PTCH1-206ENST00000421141 MARCKSL1P49006 195 aa10.71□□□□□ -0.69
PTCH1-206ENST00000421141 ZCWPW2Q504Y3 356 aa10.71□□□□□ -0.69
PTCH1-206ENST00000421141 CERCAMQ5T4B2 595 aa10.71□□□□□ -0.69
PTCH1-206ENST00000421141 ARMCX6Q7L4S7 300 aa10.71□□□□□ -0.69
PTCH1-206ENST00000421141 RASGRP3Q8IV61 690 aa10.71□□□□□ -0.69
PTCH1-206ENST00000421141 P3H2Q8IVL5 708 aa10.71□□□□□ -0.69
PTCH1-206ENST00000421141 NIPA2Q8N8Q9 360 aa10.71□□□□□ -0.69
PTCH1-206ENST00000421141 SLC22A18Q96BI1 424 aa10.71□□□□□ -0.69
PTCH1-206ENST00000421141 ACAT2Q9BWD1 397 aa10.71□□□□□ -0.69
PTCH1-206ENST00000421141 ENOPH1Q9UHY7 261 aa10.71□□□□□ -0.69
PTCH1-206ENST00000421141 SNX10Q9Y5X0 201 aa10.71□□□□□ -0.69
PTCH1-206ENST00000421141 KRT75O95678 551 aa10.71□□□□□ -0.69
PTCH1-206ENST00000421141 ARRB1P49407 418 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-206ENST00000421141 DENND1AQ8TEH3 1009 aa10.71□□□□□ -0.69
PTCH1-206ENST00000421141 PCDHB18PQ96TA0 734 aa10.71□□□□□ -0.69
PTCH1-206ENST00000421141 NUSAP1Q9BXS6 441 aaKnown RBP10.71□□□□□ -0.69
PTCH1-206ENST00000421141 SGK2Q9HBY8 427 aa10.71□□□□□ -0.69
PTCH1-206ENST00000421141 PIRO00625 290 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 ALBP02768 609 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 NDUFS1P28331 727 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 TMEM220Q6QAJ8 160 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 CLEC4CQ8WTT0 213 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 CATSPER2Q96P56 530 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 KLHL20Q9Y2M5 609 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 C9J4A7 227 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 SLC35G6P0C7Q6 338 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 EN2P19622 333 aaPredicted RBP10.71□□□□□ -0.7
PTCH1-206ENST00000421141 PLEKHG4Q58EX7 1191 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 TPRG1Q6ZUI0 275 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 GPR156Q8NFN8 814 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 RIN3Q8TB24 985 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 POLR1DQ9Y2S0 133 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 ZBTB22O15209 634 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 NOL4O94818 638 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 PRKAG1P54619 331 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 PYROXD2Q8N2H3 581 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 NETO2Q8NC67 525 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 SUN3Q8TAQ9 357 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 LRRN4Q8WUT4 740 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 SMARCD2Q92925 531 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 ACE2Q9BYF1 805 aaPredicted RBP10.71□□□□□ -0.7
PTCH1-206ENST00000421141 PRRG4Q9BZD6 226 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 OSBPL6Q9BZF3 934 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 RPRD1BQ9NQG5 326 aaKnown RBP10.71□□□□□ -0.7
PTCH1-206ENST00000421141 PCDHGB3Q9Y5G1 929 aa10.71□□□□□ -0.7
PTCH1-206ENST00000421141 HK2P52789 917 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 CHRDL2Q6WN34 429 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms