RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 OLIG2Q13516 323 aa4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 GGNBP1Q5YKI7 109 aa4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 WBP2NLQ6ICG8 309 aa4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 DUS1LQ6P1R4 473 aaKnown RBP4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 KCTD18Q6PI47 426 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 TUBA1AQ71U36 451 aa4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 CUZD1Q86UP6 607 aa4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 C1orf87Q8N0U7 546 aa4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 CIARTQ8N365 385 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 SRBD1Q8N5C6 995 aaKnown RBP4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 RFLNBQ8N5W9 214 aa4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 ACVR1CQ8NER5 493 aa4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 TDRD7Q8NHU6 1098 aaKnown RBP4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 ABTB1Q969K4 478 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 ORAI1Q96D31 301 aa4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 TUBA1CQ9BQE3 449 aa4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 PCDH9Q9HC56 1237 aa4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 ACSS1Q9NUB1 689 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 TTC7AQ9ULT0 858 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 ZNF711Q9Y462 761 aa4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 CGNL1Q0VF96 1302 aa4.4□□□□□ -1.71
HMGB1P49-201ENST00000418882 GREB1LQ9C091 1923 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 C1orf226A1L170 272 aa4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 XPNPEP2O43895 674 aa4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 ZNF432O94892 652 aa4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 SPARCP09486 303 aa4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 KRT10P13645 584 aa4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 PAX3P23760 479 aa4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 KRT9P35527 623 aa4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 CLCNKAP51800 687 aa4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 ZNF132P52740 706 aa4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 RAD23BP54727 409 aa4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 RPS3AP61247 264 aaKnown RBP4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 ARL16Q0P5N6 197 aa4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 UNQ6126/PRO20091Q6UXV3 157 aa4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 ATG9AQ7Z3C6 839 aa4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 NAGSQ8N159 534 aa4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 POC1AQ8NBT0 407 aa4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 OR5R1Q8NH85 324 aa4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 LNX1Q8TBB1 728 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 SECTM1Q8WVN6 248 aa4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 RRNAD1Q96FB5 475 aaKnown RBP4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 TTC14Q96N46 770 aa4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 SH3GL2Q99962 352 aa4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 UBTD1Q9HAC8 227 aa4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 FBRSL1Q9HCM7 1045 aaKnown RBP4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 TMEM30AQ9NV96 361 aa4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 MCM9Q9NXL9 1143 aa4.39□□□□□ -1.71
HMGB1P49-201ENST00000418882 FAM237BA0A1B0GVD1 139 aa4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 TTC36A6NLP5 189 aa4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 EIF3CLB5ME19 914 aaKnown RBP4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 TMEM63AO94886 807 aa4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 MYOD1P15172 320 aa4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 ZNF182P17025 639 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 DDX5P17844 614 aaKnown RBP4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 BSGP35613 385 aa4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 TMPOP42166 694 aaKnown RBP4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 ISL1P61371 349 aa4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 MED22Q15528 200 aa4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 KRTAP24-1Q3LI83 254 aa4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 KCNT1Q5JUK3 1230 aa4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 STXBP5Q5T5C0 1151 aa4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 CCDC70Q6NSX1 233 aa4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 TTI2Q6NXR4 508 aa4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 RAD9BQ6WBX8 426 aa4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 MEX3BQ6ZN04 569 aaKnown RBP4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 MUC20Q8N307 709 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 C7orf26Q96N11 449 aa4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 MAP7D2Q96T17 732 aa4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 PCGF1Q9BSM1 259 aa4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 EVA1AQ9H8M9 152 aa4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 LTB4R2Q9NPC1 389 aa4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 KLHL1Q9NR64 748 aa4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 VDAC3Q9Y277 283 aa4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 KCNE2Q9Y6J6 123 aa4.38□□□□□ -1.71
HMGB1P49-201ENST00000418882 A0A1W2PRG0 241 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 LDB3O75112 727 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 MBD4O95243 580 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 KCNK5O95279 499 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 F7P08709 466 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 CDH1P12830 882 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 APOBEC1P41238 236 aaKnown RBP4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 CSNK2A1P68400 391 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 RUNX1T1Q06455 604 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 CSTF3Q12996 717 aaKnown RBP4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 ZRSR1Q15695 479 aaKnown RBP4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 CCNG2Q16589 344 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 KRT24Q2M2I5 525 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 DPCR1Q3MIW9 517 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 SIGIRRQ6IA17 410 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 C9orf139Q6ZV77 190 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 TMTC3Q6ZXV5 915 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 PXKQ7Z7A4 578 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 DSG4Q86SJ6 1040 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 SLC9B2Q86UD5 537 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 SFR1Q86XK3 245 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 CSNK2A3Q8NEV1 391 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 ETNPPLQ8TBG4 499 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 APBB2Q92870 758 aa4.37□□□□□ -1.71
HMGB1P49-201ENST00000418882 MTERF1Q99551 399 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms